RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 CCDC94Q9BW85 323 aaPredicted RBP9.01□□□□□ -0.97
CDHR3-201ENST00000317716 FER1L4A9Z1Z3 1794 aa9.01□□□□□ -0.97
CDHR3-201ENST00000317716 FAM83GA6ND36 823 aa9.01□□□□□ -0.97
CDHR3-201ENST00000317716 STK11IPQ8N1F8 1099 aa9.01□□□□□ -0.97
CDHR3-201ENST00000317716 TMX3Q96JJ7 454 aa9.01□□□□□ -0.97
CDHR3-201ENST00000317716 LMTK3Q96Q04 1460 aa9.01□□□□□ -0.97
CDHR3-201ENST00000317716 ZMYM4Q5VZL5 1548 aa9.01□□□□□ -0.97
CDHR3-201ENST00000317716 TULP1O00294 542 aaPredicted RBP9.01□□□□□ -0.97
CDHR3-201ENST00000317716 SURF6O75683 361 aaKnown RBP9.01□□□□□ -0.97
CDHR3-201ENST00000317716 NUTM1Q86Y26 1132 aa9.01□□□□□ -0.97
CDHR3-201ENST00000317716 TFIP11Q9UBB9 837 aaKnown RBP9.01□□□□□ -0.97
CDHR3-201ENST00000317716 CNPY2Q9Y2B0 182 aa9.01□□□□□ -0.97
CDHR3-201ENST00000317716 RALGAPBQ86X10 1494 aa9□□□□□ -0.97
CDHR3-201ENST00000317716 WASLO00401 505 aaPredicted RBP9□□□□□ -0.97
CDHR3-201ENST00000317716 SDSP20132 328 aa9□□□□□ -0.97
CDHR3-201ENST00000317716 ZNF330Q9Y3S2 320 aaPredicted RBP9□□□□□ -0.97
CDHR3-201ENST00000317716 WDR33Q9C0J8 1336 aaKnown RBP9□□□□□ -0.97
CDHR3-201ENST00000317716 HTATSF1O43719 755 aaKnown RBP9□□□□□ -0.97
CDHR3-201ENST00000317716 TNNT1P13805 278 aa9□□□□□ -0.97
CDHR3-201ENST00000317716 TSPYL6Q8N831 410 aa9□□□□□ -0.97
CDHR3-201ENST00000317716 SNX21Q969T3 373 aa9□□□□□ -0.97
CDHR3-201ENST00000317716 TMX1Q9H3N1 280 aa9□□□□□ -0.97
CDHR3-201ENST00000317716 TBX22Q9Y458 520 aa9□□□□□ -0.97
CDHR3-201ENST00000317716 CAMSAP1Q5T5Y3 1602 aa9□□□□□ -0.97
CDHR3-201ENST00000317716 A2ML1A8K2U0 1454 aa9□□□□□ -0.97
CDHR3-201ENST00000317716 TET3O43151 1660 aa9□□□□□ -0.97
CDHR3-201ENST00000317716 TTLL5Q6EMB2 1281 aa9□□□□□ -0.97
CDHR3-201ENST00000317716 CWC27Q6UX04 472 aaKnown RBP9□□□□□ -0.97
CDHR3-201ENST00000317716 USP48Q86UV5 1035 aa9□□□□□ -0.97
CDHR3-201ENST00000317716 NME9Q86XW9 330 aa9□□□□□ -0.97
CDHR3-201ENST00000317716 SIGLEC1Q9BZZ2 1709 aa9□□□□□ -0.97
CDHR3-201ENST00000317716 SETD1BQ9UPS6 1966 aaKnown RBP8.99□□□□□ -0.97
CDHR3-201ENST00000317716 IQGAP3Q86VI3 1631 aa8.99□□□□□ -0.97
CDHR3-201ENST00000317716 CCDC192P0DO97 292 aa8.99□□□□□ -0.97
CDHR3-201ENST00000317716 HDAC1Q13547 482 aaPredicted RBP8.99□□□□□ -0.97
CDHR3-201ENST00000317716 MNS1Q8NEH6 495 aa8.99□□□□□ -0.97
CDHR3-201ENST00000317716 TNMDQ9H2S6 317 aa8.99□□□□□ -0.97
CDHR3-201ENST00000317716 STRN4Q9NRL3 753 aa8.99□□□□□ -0.97
CDHR3-201ENST00000317716 RNF17Q9BXT8 1623 aaKnown RBP8.99□□□□□ -0.97
CDHR3-201ENST00000317716 CCDC66A2RUB6 948 aa8.99□□□□□ -0.97
CDHR3-201ENST00000317716 GADD45BO75293 160 aaPredicted RBP8.99□□□□□ -0.97
CDHR3-201ENST00000317716 GTF2F1P35269 517 aaKnown RBP eCLIP8.99□□□□□ -0.97
CDHR3-201ENST00000317716 KRT24Q2M2I5 525 aa8.99□□□□□ -0.97
CDHR3-201ENST00000317716 LMBRD1Q9NUN5 540 aa8.99□□□□□ -0.97
CDHR3-201ENST00000317716 TSPYL4Q9UJ04 414 aa8.99□□□□□ -0.97
CDHR3-201ENST00000317716 CCDC61Q9Y6R9 512 aa8.99□□□□□ -0.97
CDHR3-201ENST00000317716 SMC2O95347 1197 aa8.99□□□□□ -0.97
CDHR3-201ENST00000317716 LMOD3Q0VAK6 560 aa8.99□□□□□ -0.97
CDHR3-201ENST00000317716 TCEANC2Q96MN5 208 aa8.99□□□□□ -0.97
CDHR3-201ENST00000317716 PHF8Q9UPP1 1060 aa8.98□□□□□ -0.97
CDHR3-201ENST00000317716 TMEM94Q12767 1356 aa8.98□□□□□ -0.97
CDHR3-201ENST00000317716 YTHDC2Q9H6S0 1430 aaKnown RBP8.98□□□□□ -0.97
CDHR3-201ENST00000317716 ZKSCAN1P17029 563 aaPredicted RBP8.98□□□□□ -0.97
CDHR3-201ENST00000317716 CHRNA2Q15822 529 aa8.98□□□□□ -0.97
CDHR3-201ENST00000317716 MCM10Q7L590 875 aa8.98□□□□□ -0.97
CDHR3-201ENST00000317716 CCDC186Q7Z3E2 898 aa8.98□□□□□ -0.97
CDHR3-201ENST00000317716 SMAP1Q8IYB5 467 aaPredicted RBP8.98□□□□□ -0.97
CDHR3-201ENST00000317716 NSFL1CQ9UNZ2 370 aaKnown RBP8.98□□□□□ -0.97
CDHR3-201ENST00000317716 UNC13BO14795 1591 aa8.98□□□□□ -0.97
CDHR3-201ENST00000317716 NPHP4O75161 1426 aaPredicted RBP8.98□□□□□ -0.97
CDHR3-201ENST00000317716 MEX3CQ5U5Q3 659 aaKnown RBP8.98□□□□□ -0.97
CDHR3-201ENST00000317716 SDF4Q9BRK5 362 aa8.98□□□□□ -0.97
CDHR3-201ENST00000317716 ZBTB40Q9NUA8 1239 aa8.98□□□□□ -0.97
CDHR3-201ENST00000317716 KIF1BO60333 1816 aa8.98□□□□□ -0.97
CDHR3-201ENST00000317716 PTPRTO14522 1441 aa8.97□□□□□ -0.97
CDHR3-201ENST00000317716 CPA1P15085 419 aa8.97□□□□□ -0.97
CDHR3-201ENST00000317716 PTGS1P23219 599 aa8.97□□□□□ -0.97
CDHR3-201ENST00000317716 CCDC183Q5T5S1 534 aa8.97□□□□□ -0.97
CDHR3-201ENST00000317716 LARP1BQ659C4 914 aaKnown RBP8.97□□□□□ -0.97
CDHR3-201ENST00000317716 DDX11Q96FC9 970 aa8.97□□□□□ -0.97
CDHR3-201ENST00000317716 SPG7Q9UQ90 795 aa8.97□□□□□ -0.97
CDHR3-201ENST00000317716 ROBO2Q9HCK4 1378 aa8.97□□□□□ -0.97
CDHR3-201ENST00000317716 SCAF11Q99590 1463 aaKnown RBP8.97□□□□□ -0.97
CDHR3-201ENST00000317716 RIOK3O14730 519 aaKnown RBP8.97□□□□□ -0.97
CDHR3-201ENST00000317716 GPT2Q8TD30 523 aa8.97□□□□□ -0.97
CDHR3-201ENST00000317716 SYTL4Q96C24 671 aaPredicted RBP8.97□□□□□ -0.97
CDHR3-201ENST00000317716 STAC3Q96MF2 364 aa8.97□□□□□ -0.97
CDHR3-201ENST00000317716 JAKMIP1Q96N16 626 aaKnown RBP8.97□□□□□ -0.97
CDHR3-201ENST00000317716 NUP62CLQ9H1M0 184 aa8.97□□□□□ -0.97
CDHR3-201ENST00000317716 ACEP12821 1306 aa8.97□□□□□ -0.97
CDHR3-201ENST00000317716 RBM25P49756 843 aaKnown RBP8.97□□□□□ -0.97
CDHR3-201ENST00000317716 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.97□□□□□ -0.97
CDHR3-201ENST00000317716 SPHKAPQ2M3C7 1700 aa8.97□□□□□ -0.97
CDHR3-201ENST00000317716 PIK3C2BO00750 1634 aa8.97□□□□□ -0.97
CDHR3-201ENST00000317716 CASTP20810 708 aaKnown RBP8.96□□□□□ -0.97
CDHR3-201ENST00000317716 TTC22Q5TAA0 569 aa8.96□□□□□ -0.97
CDHR3-201ENST00000317716 SULT6B1Q6IMI4 303 aa8.96□□□□□ -0.97
CDHR3-201ENST00000317716 DHX37Q8IY37 1157 aaKnown RBP8.96□□□□□ -0.97
CDHR3-201ENST00000317716 MEIS3Q99687 375 aa8.96□□□□□ -0.97
CDHR3-201ENST00000317716 C19orf44Q9H6X5 657 aa8.96□□□□□ -0.97
CDHR3-201ENST00000317716 MROH1Q8NDA8 1641 aa8.96□□□□□ -0.97
CDHR3-201ENST00000317716 TRPM2O94759 1503 aa8.96□□□□□ -0.97
CDHR3-201ENST00000317716 TEX35Q5T0J7 233 aa8.96□□□□□ -0.98
CDHR3-201ENST00000317716 FAM173BQ6P4H8 233 aa8.96□□□□□ -0.98
CDHR3-201ENST00000317716 PDILTQ8N807 584 aa8.96□□□□□ -0.98
CDHR3-201ENST00000317716 NECAB1Q8N987 351 aa8.96□□□□□ -0.98
CDHR3-201ENST00000317716 PPP1R9BQ96SB3 815 aa8.96□□□□□ -0.98
CDHR3-201ENST00000317716 BCL2L12Q9HB09 334 aa8.96□□□□□ -0.98
CDHR3-201ENST00000317716 AGLP35573 1532 aa8.96□□□□□ -0.98
CDHR3-201ENST00000317716 MSH6P52701 1360 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms