RNA–Protein interactions for RNA: ENST00000317233.8

AFF3-201, Transcript of AF4/FMR2 family member 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene AFF3, Length 8,135 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-201ENST00000317233 KIF4AO95239 1232 aa15.26■□□□□ 0.03
AFF3-201ENST00000317233 FAM184BQ9ULE4 1060 aa15.26■□□□□ 0.03
AFF3-201ENST00000317233 CACYBPQ9HB71 228 aaKnown RBP15.26■□□□□ 0.03
AFF3-201ENST00000317233 TAF12Q16514 161 aa15.26■□□□□ 0.03
AFF3-201ENST00000317233 KIF20AO95235 890 aa15.25■□□□□ 0.03
AFF3-201ENST00000317233 CCDC96Q2M329 555 aa15.25■□□□□ 0.03
AFF3-201ENST00000317233 SYCP3Q8IZU3 236 aa15.25■□□□□ 0.03
AFF3-201ENST00000317233 MPHOSPH9Q99550 1183 aa15.25■□□□□ 0.03
AFF3-201ENST00000317233 PANK3Q9H999 370 aa15.25■□□□□ 0.03
AFF3-201ENST00000317233 CWC25Q9NXE8 425 aaPredicted RBP15.25■□□□□ 0.03
AFF3-201ENST00000317233 TRAK2O60296 914 aa15.25■□□□□ 0.03
AFF3-201ENST00000317233 CCDC83Q8IWF9 413 aa15.25■□□□□ 0.03
AFF3-201ENST00000317233 SMC6Q96SB8 1091 aa15.25■□□□□ 0.03
AFF3-201ENST00000317233 MKNK2Q9HBH9 465 aa15.25■□□□□ 0.03
AFF3-201ENST00000317233 STXBP4Q6ZWJ1 553 aa15.25■□□□□ 0.03
AFF3-201ENST00000317233 PFDN4Q9NQP4 134 aa15.25■□□□□ 0.03
AFF3-201ENST00000317233 CTNNA3Q9UI47 895 aa15.25■□□□□ 0.03
AFF3-201ENST00000317233 MIA2Q96PC5 1412 aa15.24■□□□□ 0.03
AFF3-201ENST00000317233 LARP1BQ659C4 914 aaKnown RBP15.24■□□□□ 0.03
AFF3-201ENST00000317233 PAIP2Q9BPZ3 127 aaKnown RBP15.24■□□□□ 0.03
AFF3-201ENST00000317233 ZSCAN12O43309 604 aa15.24■□□□□ 0.03
AFF3-201ENST00000317233 CCDC155Q8N6L0 562 aa15.24■□□□□ 0.03
AFF3-201ENST00000317233 GAS8O95995 478 aa15.24■□□□□ 0.03
AFF3-201ENST00000317233 RRP1P56182 461 aaKnown RBP15.24■□□□□ 0.03
AFF3-201ENST00000317233 TDRD12Q587J7 1177 aaKnown RBP15.24■□□□□ 0.03
AFF3-201ENST00000317233 PDCL2Q8N4E4 241 aa15.24■□□□□ 0.03
AFF3-201ENST00000317233 CCDC63Q8NA47 563 aa15.24■□□□□ 0.03
AFF3-201ENST00000317233 ATP6V1E1P36543 226 aa15.24■□□□□ 0.03
AFF3-201ENST00000317233 SPATA32Q96LK8 384 aa15.24■□□□□ 0.03
AFF3-201ENST00000317233 STAC3Q96MF2 364 aa15.24■□□□□ 0.03
AFF3-201ENST00000317233 POLR3DP05423 398 aaPredicted RBP15.23■□□□□ 0.03
AFF3-201ENST00000317233 CTR9Q6PD62 1173 aa15.23■□□□□ 0.03
AFF3-201ENST00000317233 HAUS7Q99871 368 aa15.23■□□□□ 0.03
AFF3-201ENST00000317233 TTC12Q9H892 705 aaPredicted RBP15.23■□□□□ 0.03
AFF3-201ENST00000317233 TXNDC16Q9P2K2 825 aa15.23■□□□□ 0.03
AFF3-201ENST00000317233 WDR33Q9C0J8 1336 aaKnown RBP15.23■□□□□ 0.03
AFF3-201ENST00000317233 CEP112Q8N8E3 955 aa15.23■□□□□ 0.03
AFF3-201ENST00000317233 KIF2AO00139 706 aaPredicted RBP15.23■□□□□ 0.03
AFF3-201ENST00000317233 HMOX1P09601 288 aa15.23■□□□□ 0.03
AFF3-201ENST00000317233 WDR66Q8TBY9 1149 aa15.23■□□□□ 0.03
AFF3-201ENST00000317233 PRC1O43663 620 aa15.22■□□□□ 0.03
AFF3-201ENST00000317233 ERCC5P28715 1186 aaPredicted RBP15.22■□□□□ 0.03
AFF3-201ENST00000317233 CCDC174Q6PII3 467 aa15.22■□□□□ 0.03
AFF3-201ENST00000317233 KIF4BQ2VIQ3 1234 aa15.22■□□□□ 0.03
AFF3-201ENST00000317233 GPRASP1Q5JY77 1395 aa15.22■□□□□ 0.03
AFF3-201ENST00000317233 KIAA1524Q8TCG1 905 aa15.22■□□□□ 0.03
AFF3-201ENST00000317233 FILIP1Q7Z7B0 1213 aa15.22■□□□□ 0.03
AFF3-201ENST00000317233 CUL4BQ13620 913 aa15.22■□□□□ 0.03
AFF3-201ENST00000317233 NUP88Q99567 741 aaPredicted RBP15.22■□□□□ 0.03
AFF3-201ENST00000317233 SAMM50Q9Y512 469 aa15.22■□□□□ 0.03
AFF3-201ENST00000317233 CCT6BQ92526 530 aa15.22■□□□□ 0.03
AFF3-201ENST00000317233 NCAPGQ9BPX3 1015 aa15.22■□□□□ 0.03
AFF3-201ENST00000317233 KLHL10Q6JEL2 608 aa15.21■□□□□ 0.03
AFF3-201ENST00000317233 RIOK3O14730 519 aaKnown RBP15.21■□□□□ 0.03
AFF3-201ENST00000317233 HMGB1P09429 215 aaKnown RBP15.21■□□□□ 0.03
AFF3-201ENST00000317233 RRBP1Q9P2E9 1410 aaKnown RBP15.21■□□□□ 0.03
AFF3-201ENST00000317233 CABP4P57796 275 aa15.21■□□□□ 0.03
AFF3-201ENST00000317233 BICD1Q96G01 975 aa15.21■□□□□ 0.03
AFF3-201ENST00000317233 BAG4O95429 457 aaKnown RBP15.21■□□□□ 0.03
AFF3-201ENST00000317233 IGHMBP2P38935 993 aaKnown RBP15.21■□□□□ 0.03
AFF3-201ENST00000317233 NCBP1Q09161 790 aaKnown RBP15.21■□□□□ 0.03
AFF3-201ENST00000317233 GNAI2P04899 355 aa15.21■□□□□ 0.02
AFF3-201ENST00000317233 CEP83Q9Y592 693 aa15.21■□□□□ 0.02
AFF3-201ENST00000317233 PLEKHO1Q53GL0 409 aaPredicted RBP15.2■□□□□ 0.02
AFF3-201ENST00000317233 FAM114A2Q9NRY5 505 aa15.2■□□□□ 0.02
AFF3-201ENST00000317233 STX6O43752 255 aa15.2■□□□□ 0.02
AFF3-201ENST00000317233 CCDC144AA2RUR9 1427 aa15.2■□□□□ 0.02
AFF3-201ENST00000317233 CKAP4Q07065 602 aaKnown RBP15.2■□□□□ 0.02
AFF3-201ENST00000317233 IFI16Q16666 785 aaKnown RBP15.2■□□□□ 0.02
AFF3-201ENST00000317233 KIAA0753Q2KHM9 967 aa15.2■□□□□ 0.02
AFF3-201ENST00000317233 ANKS4BQ8N8V4 417 aa15.2■□□□□ 0.02
AFF3-201ENST00000317233 NUTM2BA6NNL0 878 aaPredicted RBP15.2■□□□□ 0.02
AFF3-201ENST00000317233 NUTM2EB1AL46 878 aaPredicted RBP15.2■□□□□ 0.02
AFF3-201ENST00000317233 NUTM2AQ8IVF1 878 aaPredicted RBP15.2■□□□□ 0.02
AFF3-201ENST00000317233 C16orf71Q8IYS4 520 aaPredicted RBP15.2■□□□□ 0.02
AFF3-201ENST00000317233 PKNOX2Q96KN3 472 aa15.2■□□□□ 0.02
AFF3-201ENST00000317233 CCDC172P0C7W6 258 aa15.2■□□□□ 0.02
AFF3-201ENST00000317233 HSPA4P34932 840 aa15.2■□□□□ 0.02
AFF3-201ENST00000317233 NSRP1Q9H0G5 558 aaKnown RBP15.2■□□□□ 0.02
AFF3-201ENST00000317233 PRDM2Q13029 1718 aa15.2■□□□□ 0.02
AFF3-201ENST00000317233 MAATS1Q7Z4T9 603 aa15.19■□□□□ 0.02
AFF3-201ENST00000317233 ABTB2Q8N961 1025 aa15.19■□□□□ 0.02
AFF3-201ENST00000317233 TBC1D5Q92609 795 aa15.19■□□□□ 0.02
AFF3-201ENST00000317233 RUNDC1Q96C34 613 aa15.19■□□□□ 0.02
AFF3-201ENST00000317233 ANKIB1Q9P2G1 1089 aa15.19■□□□□ 0.02
AFF3-201ENST00000317233 KIF18AQ8NI77 898 aa15.19■□□□□ 0.02
AFF3-201ENST00000317233 AAMPQ13685 434 aa15.19■□□□□ 0.02
AFF3-201ENST00000317233 GBP7Q8N8V2 638 aaPredicted RBP15.19■□□□□ 0.02
AFF3-201ENST00000317233 CCDC110Q8TBZ0 833 aa15.19■□□□□ 0.02
AFF3-201ENST00000317233 SIL1Q9H173 461 aa15.19■□□□□ 0.02
AFF3-201ENST00000317233 ABCF2Q9UG63 623 aa15.19■□□□□ 0.02
AFF3-201ENST00000317233 PDIA4P13667 645 aaKnown RBP15.19■□□□□ 0.02
AFF3-201ENST00000317233 GEN1Q17RS7 908 aa15.19■□□□□ 0.02
AFF3-201ENST00000317233 TCERG1LQ5VWI1 586 aa15.19■□□□□ 0.02
AFF3-201ENST00000317233 NUTM2GQ5VZR2 741 aa15.19■□□□□ 0.02
AFF3-201ENST00000317233 SPTY2D1Q68D10 685 aaPredicted RBP15.19■□□□□ 0.02
AFF3-201ENST00000317233 SEPT8Q92599 483 aa15.19■□□□□ 0.02
AFF3-201ENST00000317233 ZNF652Q9Y2D9 606 aa15.19■□□□□ 0.02
AFF3-201ENST00000317233 CRCPO75575 148 aa15.18■□□□□ 0.02
AFF3-201ENST00000317233 PRKCSHP14314 528 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms