RNA–Protein interactions for RNA: ENST00000317011.7

FOXR1-201, Transcript of forkhead box R1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXR1, Length 1,159 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-201ENST00000317011 C5P01031 1676 aa21.17■□□□□ 0.98
FOXR1-201ENST00000317011 TAF1LQ8IZX4 1826 aa21.17■□□□□ 0.98
FOXR1-201ENST00000317011 KDM6AO15550 1401 aaPredicted RBP21.16■□□□□ 0.98
FOXR1-201ENST00000317011 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.16■□□□□ 0.98
FOXR1-201ENST00000317011 SMIM5Q71RC9 77 aa21.15■□□□□ 0.98
FOXR1-201ENST00000317011 NLGN2Q8NFZ4 835 aa21.15■□□□□ 0.98
FOXR1-201ENST00000317011 C4BP0C0L5 1744 aa21.15■□□□□ 0.98
FOXR1-201ENST00000317011 RC3H1Q5TC82 1133 aaKnown RBP21.14■□□□□ 0.97
FOXR1-201ENST00000317011 MSL1Q68DK7 614 aa21.14■□□□□ 0.97
FOXR1-201ENST00000317011 CABP4P57796 275 aa21.13■□□□□ 0.97
FOXR1-201ENST00000317011 CD2APQ9Y5K6 639 aa21.13■□□□□ 0.97
FOXR1-201ENST00000317011 C1orf141Q5JVX7 400 aa21.12■□□□□ 0.97
FOXR1-201ENST00000317011 CC2D1BQ5T0F9 858 aaKnown RBP21.12■□□□□ 0.97
FOXR1-201ENST00000317011 NFATC2IPQ8NCF5 419 aa21.12■□□□□ 0.97
FOXR1-201ENST00000317011 GPR162Q16538 588 aa21.11■□□□□ 0.97
FOXR1-201ENST00000317011 AKAP4Q5JQC9 854 aa21.11■□□□□ 0.97
FOXR1-201ENST00000317011 GNPATO15228 680 aa21.09■□□□□ 0.97
FOXR1-201ENST00000317011 DIAPH1O60610 1272 aaKnown RBP21.09■□□□□ 0.97
FOXR1-201ENST00000317011 PHF14O94880 888 aa21.09■□□□□ 0.97
FOXR1-201ENST00000317011 KLHL34Q8N239 644 aa21.09■□□□□ 0.97
FOXR1-201ENST00000317011 GOLGB1Q14789 3259 aaKnown RBP21.09■□□□□ 0.97
FOXR1-201ENST00000317011 UBR3Q6ZT12 1888 aa21.08■□□□□ 0.97
FOXR1-201ENST00000317011 ZNF784Q8NCA9 323 aaPredicted RBP21.08■□□□□ 0.97
FOXR1-201ENST00000317011 RBM42Q9BTD8 480 aaKnown RBP21.08■□□□□ 0.97
FOXR1-201ENST00000317011 CNTNAP4Q9C0A0 1308 aa21.07■□□□□ 0.96
FOXR1-201ENST00000317011 RPS6KA4O75676 772 aa21.07■□□□□ 0.96
FOXR1-201ENST00000317011 TRAPPC3LQ5T215 181 aa21.07■□□□□ 0.96
FOXR1-201ENST00000317011 LGR6Q9HBX8 967 aa21.07■□□□□ 0.96
FOXR1-201ENST00000317011 ZNF831Q5JPB2 1677 aa21.07■□□□□ 0.96
FOXR1-201ENST00000317011 HMOX1P09601 288 aa21.06■□□□□ 0.96
FOXR1-201ENST00000317011 ADRA2BP18089 450 aa21.06■□□□□ 0.96
FOXR1-201ENST00000317011 RTCBQ9Y3I0 505 aaKnown RBP21.06■□□□□ 0.96
FOXR1-201ENST00000317011 RNMTO43148 476 aaKnown RBP21.05■□□□□ 0.96
FOXR1-201ENST00000317011 YBX3P16989 372 aaKnown RBP eCLIP21.05■□□□□ 0.96
FOXR1-201ENST00000317011 MTHFSDQ2M296 383 aaKnown RBP21.05■□□□□ 0.96
FOXR1-201ENST00000317011 ARHGEF1Q92888 912 aaKnown RBP21.05■□□□□ 0.96
FOXR1-201ENST00000317011 SLC52A2Q9HAB3 445 aa21.05■□□□□ 0.96
FOXR1-201ENST00000317011 GRIN3BO60391 1043 aa21.04■□□□□ 0.96
FOXR1-201ENST00000317011 PTCD1O75127 700 aaKnown RBP21.03■□□□□ 0.96
FOXR1-201ENST00000317011 NLGN1Q8N2Q7 840 aa21.02■□□□□ 0.96
FOXR1-201ENST00000317011 COL3A1P02461 1466 aaPredicted RBP21.01■□□□□ 0.95
FOXR1-201ENST00000317011 MMP10P09238 476 aa20.99■□□□□ 0.95
FOXR1-201ENST00000317011 GYS1P13807 737 aa20.99■□□□□ 0.95
FOXR1-201ENST00000317011 CRKLP46109 303 aaKnown RBP20.99■□□□□ 0.95
FOXR1-201ENST00000317011 INTS5Q6P9B9 1019 aaKnown RBP20.99■□□□□ 0.95
FOXR1-201ENST00000317011 CHD4Q14839 1912 aa20.99■□□□□ 0.95
FOXR1-201ENST00000317011 PELP1Q8IZL8 1130 aaKnown RBP20.98■□□□□ 0.95
FOXR1-201ENST00000317011 RFC4P35249 363 aa20.97■□□□□ 0.95
FOXR1-201ENST00000317011 MYH14Q7Z406 1995 aaKnown RBP20.97■□□□□ 0.95
FOXR1-201ENST00000317011 SCN11AQ9UI33 1791 aa20.96■□□□□ 0.95
FOXR1-201ENST00000317011 SLC39A6Q13433 755 aa20.96■□□□□ 0.95
FOXR1-201ENST00000317011 IL17REQ8NFR9 667 aa20.96■□□□□ 0.95
FOXR1-201ENST00000317011 MRC1P22897 1456 aa20.95■□□□□ 0.94
FOXR1-201ENST00000317011 DNAJC10Q8IXB1 793 aa20.95■□□□□ 0.94
FOXR1-201ENST00000317011 VSIG10Q8N0Z9 540 aa20.95■□□□□ 0.94
FOXR1-201ENST00000317011 COL5A3P25940 1745 aaPredicted RBP20.95■□□□□ 0.94
FOXR1-201ENST00000317011 ADAMTS7Q9UKP4 1686 aa20.94■□□□□ 0.94
FOXR1-201ENST00000317011 CYP19A1P11511 503 aaPredicted RBP20.94■□□□□ 0.94
FOXR1-201ENST00000317011 TGFB2P61812 414 aa20.94■□□□□ 0.94
FOXR1-201ENST00000317011 U2SURPO15042 1029 aaKnown RBP20.93■□□□□ 0.94
FOXR1-201ENST00000317011 PPP2R1AP30153 589 aa20.93■□□□□ 0.94
FOXR1-201ENST00000317011 CNGB1Q14028 1251 aaPredicted RBP20.93■□□□□ 0.94
FOXR1-201ENST00000317011 GAS2L2Q8NHY3 880 aa20.93■□□□□ 0.94
FOXR1-201ENST00000317011 CICQ96RK0 1608 aaPredicted RBP20.93■□□□□ 0.94
FOXR1-201ENST00000317011 PHACTR3Q96KR7 559 aa20.92■□□□□ 0.94
FOXR1-201ENST00000317011 RSPH6AQ9H0K4 717 aa20.92■□□□□ 0.94
FOXR1-201ENST00000317011 GNAT3A8MTJ3 354 aa20.91■□□□□ 0.94
FOXR1-201ENST00000317011 TM4SF1P30408 202 aa20.91■□□□□ 0.94
FOXR1-201ENST00000317011 USP42Q9H9J4 1324 aaKnown RBP20.91■□□□□ 0.94
FOXR1-201ENST00000317011 CCDC87Q9NVE4 849 aa20.91■□□□□ 0.94
FOXR1-201ENST00000317011 FKBP8Q14318 412 aa20.9■□□□□ 0.94
FOXR1-201ENST00000317011 CFAP53Q96M91 514 aa20.9■□□□□ 0.94
FOXR1-201ENST00000317011 SRP68Q9UHB9 627 aaKnown RBP20.9■□□□□ 0.94
FOXR1-201ENST00000317011 SOS1Q07889 1333 aaPredicted RBP20.89■□□□□ 0.93
FOXR1-201ENST00000317011 ZEB1P37275 1124 aaPredicted RBP20.89■□□□□ 0.93
FOXR1-201ENST00000317011 KCPQ6ZWJ8 1503 aa20.88■□□□□ 0.93
FOXR1-201ENST00000317011 CEMIPQ8WUJ3 1361 aa20.88■□□□□ 0.93
FOXR1-201ENST00000317011 FCHSD2O94868 740 aa20.88■□□□□ 0.93
FOXR1-201ENST00000317011 NUDCQ9Y266 331 aa20.88■□□□□ 0.93
FOXR1-201ENST00000317011 PARP3Q9Y6F1 533 aa20.88■□□□□ 0.93
FOXR1-201ENST00000317011 TJP1Q07157 1748 aa20.87■□□□□ 0.93
FOXR1-201ENST00000317011 KCNA3P22001 575 aa20.87■□□□□ 0.93
FOXR1-201ENST00000317011 PRKAR2BP31323 418 aa20.87■□□□□ 0.93
FOXR1-201ENST00000317011 C10orf71Q711Q0 1435 aa20.87■□□□□ 0.93
FOXR1-201ENST00000317011 A0A0G2JLW4 131 aa20.86■□□□□ 0.93
FOXR1-201ENST00000317011 DDR1Q08345 913 aa20.86■□□□□ 0.93
FOXR1-201ENST00000317011 ZNF790Q6PG37 636 aa20.86■□□□□ 0.93
FOXR1-201ENST00000317011 NARFQ9UHQ1 456 aa20.86■□□□□ 0.93
FOXR1-201ENST00000317011 PXDNLA1KZ92 1463 aa20.86■□□□□ 0.93
FOXR1-201ENST00000317011 ZNF496Q96IT1 587 aaPredicted RBP20.85■□□□□ 0.93
FOXR1-201ENST00000317011 ZBTB1Q9Y2K1 713 aa20.85■□□□□ 0.93
FOXR1-201ENST00000317011 KIF13BQ9NQT8 1826 aa20.84■□□□□ 0.93
FOXR1-201ENST00000317011 POLRMTO00411 1230 aaKnown RBP20.84■□□□□ 0.93
FOXR1-201ENST00000317011 DPEP1P16444 411 aa20.84■□□□□ 0.93
FOXR1-201ENST00000317011 EIF5P55010 431 aaKnown RBP20.84■□□□□ 0.93
FOXR1-201ENST00000317011 C1QTNF8P60827 252 aa20.84■□□□□ 0.93
FOXR1-201ENST00000317011 TEFQ10587 303 aa20.84■□□□□ 0.93
FOXR1-201ENST00000317011 BCL2L12Q9HB09 334 aa20.84■□□□□ 0.93
FOXR1-201ENST00000317011 ZPR1O75312 459 aa20.83■□□□□ 0.93
FOXR1-201ENST00000317011 USPL1Q5W0Q7 1092 aa20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms