RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 CASC1Q6TDU7 716 aa24.15■■□□□ 1.46
AP3S1-201ENST00000316788 GBP4Q96PP9 640 aa24.15■■□□□ 1.46
AP3S1-201ENST00000316788 PXDNLA1KZ92 1463 aa24.15■■□□□ 1.46
AP3S1-201ENST00000316788 FAM208AQ9UK61 1670 aaKnown RBP24.14■■□□□ 1.46
AP3S1-201ENST00000316788 ROBO1Q9Y6N7 1651 aa24.14■■□□□ 1.46
AP3S1-201ENST00000316788 HOXC9P31274 260 aa24.14■■□□□ 1.45
AP3S1-201ENST00000316788 STK31Q9BXU1 1019 aa24.14■■□□□ 1.45
AP3S1-201ENST00000316788 GNAT3A8MTJ3 354 aa24.13■■□□□ 1.45
AP3S1-201ENST00000316788 N4BP2Q86UW6 1770 aaPredicted RBP24.13■■□□□ 1.45
AP3S1-201ENST00000316788 CCDC30Q5VVM6 783 aa24.13■■□□□ 1.45
AP3S1-201ENST00000316788 CLEC17AQ6ZS10 378 aa24.13■■□□□ 1.45
AP3S1-201ENST00000316788 MAP3K5Q99683 1374 aa24.13■■□□□ 1.45
AP3S1-201ENST00000316788 USP26Q9BXU7 913 aa24.13■■□□□ 1.45
AP3S1-201ENST00000316788 GOLGA6L3A6NEY3 463 aa24.12■■□□□ 1.45
AP3S1-201ENST00000316788 NLRP6P59044 892 aa24.12■■□□□ 1.45
AP3S1-201ENST00000316788 SOX12O15370 315 aa24.11■■□□□ 1.45
AP3S1-201ENST00000316788 GNAI2P04899 355 aa24.11■■□□□ 1.45
AP3S1-201ENST00000316788 SKOR2Q2VWA4 1001 aaPredicted RBP24.11■■□□□ 1.45
AP3S1-201ENST00000316788 TNPO1Q92973 898 aaKnown RBP24.11■■□□□ 1.45
AP3S1-201ENST00000316788 GNAI3P08754 354 aa24.1■■□□□ 1.45
AP3S1-201ENST00000316788 SDSP20132 328 aa24.1■■□□□ 1.45
AP3S1-201ENST00000316788 G2E3Q7L622 706 aa24.1■■□□□ 1.45
AP3S1-201ENST00000316788 C16orf71Q8IYS4 520 aaPredicted RBP24.1■■□□□ 1.45
AP3S1-201ENST00000316788 FAM43AQ8N2R8 423 aa24.1■■□□□ 1.45
AP3S1-201ENST00000316788 CD2BP2O95400 341 aaKnown RBP24.1■■□□□ 1.45
AP3S1-201ENST00000316788 MIS18AQ9NYP9 233 aa24.09■■□□□ 1.45
AP3S1-201ENST00000316788 REC8O95072 547 aa24.08■■□□□ 1.45
AP3S1-201ENST00000316788 KIF1AQ12756 1690 aa24.07■■□□□ 1.44
AP3S1-201ENST00000316788 HSP90AA1P07900 732 aaKnown RBP24.07■■□□□ 1.44
AP3S1-201ENST00000316788 OTUD7AQ8TE49 926 aaPredicted RBP24.07■■□□□ 1.44
AP3S1-201ENST00000316788 FLIIQ13045 1269 aa24.07■■□□□ 1.44
AP3S1-201ENST00000316788 SALL3Q9BXA9 1300 aa24.06■■□□□ 1.44
AP3S1-201ENST00000316788 PSME1Q06323 249 aa24.06■■□□□ 1.44
AP3S1-201ENST00000316788 TAF7Q15545 349 aaPredicted RBP24.06■■□□□ 1.44
AP3S1-201ENST00000316788 MED1Q15648 1581 aaPredicted RBP24.05■■□□□ 1.44
AP3S1-201ENST00000316788 KRT28Q7Z3Y7 464 aa24.05■■□□□ 1.44
AP3S1-201ENST00000316788 CACNA1FO60840 1977 aa24.05■■□□□ 1.44
AP3S1-201ENST00000316788 PDE1AP54750 535 aa24.04■■□□□ 1.44
AP3S1-201ENST00000316788 RBM42Q9BTD8 480 aaKnown RBP24.04■■□□□ 1.44
AP3S1-201ENST00000316788 CHMP4AQ9BY43 222 aa24.04■■□□□ 1.44
AP3S1-201ENST00000316788 F6X3S4 739 aa24.04■■□□□ 1.44
AP3S1-201ENST00000316788 SMARCA5O60264 1052 aaPredicted RBP24.04■■□□□ 1.44
AP3S1-201ENST00000316788 MRE11P49959 708 aa24.04■■□□□ 1.44
AP3S1-201ENST00000316788 SLC4A10Q6U841 1118 aa24.04■■□□□ 1.44
AP3S1-201ENST00000316788 NPHP3Q7Z494 1330 aa24.03■■□□□ 1.44
AP3S1-201ENST00000316788 PHRF1Q9P1Y6 1649 aaKnown RBP24.03■■□□□ 1.44
AP3S1-201ENST00000316788 PXDNQ92626 1479 aa24.03■■□□□ 1.44
AP3S1-201ENST00000316788 CEMIPQ8WUJ3 1361 aa24.03■■□□□ 1.44
AP3S1-201ENST00000316788 ERC2O15083 957 aa24.03■■□□□ 1.44
AP3S1-201ENST00000316788 ATP8B2P98198 1209 aa24.03■■□□□ 1.44
AP3S1-201ENST00000316788 IL17REQ8NFR9 667 aa24.03■■□□□ 1.44
AP3S1-201ENST00000316788 NHSL1Q5SYE7 1610 aa24.02■■□□□ 1.44
AP3S1-201ENST00000316788 NFAT5O94916 1531 aa24.02■■□□□ 1.44
AP3S1-201ENST00000316788 HOXB7P09629 217 aa24.01■■□□□ 1.43
AP3S1-201ENST00000316788 XRCC6P12956 609 aaKnown RBP eCLIP24.01■■□□□ 1.43
AP3S1-201ENST00000316788 ABTB2Q8N961 1025 aa24.01■■□□□ 1.43
AP3S1-201ENST00000316788 RTN4Q9NQC3 1192 aaKnown RBP24.01■■□□□ 1.43
AP3S1-201ENST00000316788 AOX1Q06278 1338 aa24.01■■□□□ 1.43
AP3S1-201ENST00000316788 IBTKQ9P2D0 1353 aaPredicted RBP24.01■■□□□ 1.43
AP3S1-201ENST00000316788 NUCB2P80303 420 aa24.01■■□□□ 1.43
AP3S1-201ENST00000316788 CWC22Q9HCG8 908 aaKnown RBP24.01■■□□□ 1.43
AP3S1-201ENST00000316788 SOS2Q07890 1332 aaPredicted RBP24■■□□□ 1.43
AP3S1-201ENST00000316788 ST18O60284 1047 aa24■■□□□ 1.43
AP3S1-201ENST00000316788 FKBP5Q13451 457 aaPredicted RBP24■■□□□ 1.43
AP3S1-201ENST00000316788 IP6K1Q92551 441 aa24■■□□□ 1.43
AP3S1-201ENST00000316788 LRRCC1Q9C099 1032 aa24■■□□□ 1.43
AP3S1-201ENST00000316788 SRCIN1Q9C0H9 1055 aa24■■□□□ 1.43
AP3S1-201ENST00000316788 STAP2Q9UGK3 403 aa23.99■■□□□ 1.43
AP3S1-201ENST00000316788 AHDC1Q5TGY3 1603 aaPredicted RBP23.99■■□□□ 1.43
AP3S1-201ENST00000316788 GOLGA6L22H0YM25 854 aa23.98■■□□□ 1.43
AP3S1-201ENST00000316788 EPB41L2O43491 1005 aaKnown RBP23.98■■□□□ 1.43
AP3S1-201ENST00000316788 TRPM3Q9HCF6 1732 aaPredicted RBP23.97■■□□□ 1.43
AP3S1-201ENST00000316788 TUBGCP6Q96RT7 1819 aa23.97■■□□□ 1.43
AP3S1-201ENST00000316788 NUTM2GQ5VZR2 741 aa23.97■■□□□ 1.43
AP3S1-201ENST00000316788 CYP2E1P05181 493 aaPredicted RBP23.96■■□□□ 1.43
AP3S1-201ENST00000316788 IL17RAQ96F46 866 aa23.96■■□□□ 1.43
AP3S1-201ENST00000316788 PLEKHG5O94827 1062 aa23.96■■□□□ 1.43
AP3S1-201ENST00000316788 HSPA1LP34931 641 aa23.96■■□□□ 1.43
AP3S1-201ENST00000316788 GZF1Q9H116 711 aaPredicted RBP23.96■■□□□ 1.43
AP3S1-201ENST00000316788 PHLPP1O60346 1717 aa23.95■■□□□ 1.42
AP3S1-201ENST00000316788 LMOD2Q6P5Q4 547 aa23.95■■□□□ 1.42
AP3S1-201ENST00000316788 APBB1O00213 710 aa23.94■■□□□ 1.42
AP3S1-201ENST00000316788 MX1P20591 662 aa23.94■■□□□ 1.42
AP3S1-201ENST00000316788 SSFA2P28290 1259 aa23.94■■□□□ 1.42
AP3S1-201ENST00000316788 KCNH5Q8NCM2 988 aa23.94■■□□□ 1.42
AP3S1-201ENST00000316788 OVOS2A0A0G2JMS6 1433 aa23.94■■□□□ 1.42
AP3S1-201ENST00000316788 NCAPD2Q15021 1401 aa23.94■■□□□ 1.42
AP3S1-201ENST00000316788 LTN1O94822 1766 aa23.94■■□□□ 1.42
AP3S1-201ENST00000316788 COL16A1Q07092 1604 aaPredicted RBP23.93■■□□□ 1.42
AP3S1-201ENST00000316788 SPATA31A3Q5VYP0 1347 aa23.93■■□□□ 1.42
AP3S1-201ENST00000316788 RAB11FIP3O75154 756 aa23.93■■□□□ 1.42
AP3S1-201ENST00000316788 MCM2P49736 904 aa23.93■■□□□ 1.42
AP3S1-201ENST00000316788 ANAPC15P60006 121 aa23.93■■□□□ 1.42
AP3S1-201ENST00000316788 HDGFL1Q5TGJ6 251 aa23.93■■□□□ 1.42
AP3S1-201ENST00000316788 SSH3Q8TE77 659 aa23.93■■□□□ 1.42
AP3S1-201ENST00000316788 GRPEL1Q9HAV7 217 aa23.93■■□□□ 1.42
AP3S1-201ENST00000316788 EXOC6BQ9Y2D4 811 aa23.93■■□□□ 1.42
AP3S1-201ENST00000316788 KDM3BQ7LBC6 1761 aa23.92■■□□□ 1.42
AP3S1-201ENST00000316788 PNMA6EA0A0J9YXQ4 647 aa23.92■■□□□ 1.42
AP3S1-201ENST00000316788 BAG4O95429 457 aaKnown RBP23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms