RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 HTATSF1O43719 755 aaKnown RBP18.33■□□□□ 0.52
CLK4-201ENST00000316308 GCP02774 474 aa18.33■□□□□ 0.52
CLK4-201ENST00000316308 HDGFL1Q5TGJ6 251 aa18.33■□□□□ 0.52
CLK4-201ENST00000316308 LRRFIP2Q9Y608 721 aaKnown RBP18.33■□□□□ 0.52
CLK4-201ENST00000316308 CCT4P50991 539 aaKnown RBP18.32■□□□□ 0.52
CLK4-201ENST00000316308 FAM208AQ9UK61 1670 aaKnown RBP18.32■□□□□ 0.52
CLK4-201ENST00000316308 ARXQ96QS3 562 aa18.32■□□□□ 0.52
CLK4-201ENST00000316308 USP44Q9H0E7 712 aa18.32■□□□□ 0.52
CLK4-201ENST00000316308 GNAI2P04899 355 aa18.31■□□□□ 0.52
CLK4-201ENST00000316308 PXDNQ92626 1479 aa18.3■□□□□ 0.52
CLK4-201ENST00000316308 DDIT3P35638 169 aa18.3■□□□□ 0.52
CLK4-201ENST00000316308 GZF1Q9H116 711 aaPredicted RBP18.3■□□□□ 0.52
CLK4-201ENST00000316308 CHPF2Q9P2E5 772 aa18.3■□□□□ 0.52
CLK4-201ENST00000316308 CEMIPQ8WUJ3 1361 aa18.3■□□□□ 0.52
CLK4-201ENST00000316308 EIF4A1P60842 406 aaKnown RBP18.3■□□□□ 0.52
CLK4-201ENST00000316308 USP54Q70EL1 1684 aa18.29■□□□□ 0.52
CLK4-201ENST00000316308 ZNF530Q6P9A1 599 aaPredicted RBP18.29■□□□□ 0.52
CLK4-201ENST00000316308 NPHP4O75161 1426 aaPredicted RBP18.29■□□□□ 0.52
CLK4-201ENST00000316308 MCM4P33991 863 aa18.29■□□□□ 0.52
CLK4-201ENST00000316308 SNX21Q969T3 373 aa18.29■□□□□ 0.52
CLK4-201ENST00000316308 CHMP5Q9NZZ3 219 aa18.29■□□□□ 0.52
CLK4-201ENST00000316308 PDE1AP54750 535 aa18.28■□□□□ 0.52
CLK4-201ENST00000316308 ZC3H6P61129 1189 aaKnown RBP18.28■□□□□ 0.52
CLK4-201ENST00000316308 ARHGEF25Q86VW2 580 aa18.28■□□□□ 0.52
CLK4-201ENST00000316308 USP26Q9BXU7 913 aa18.28■□□□□ 0.52
CLK4-201ENST00000316308 NCOA3Q9Y6Q9 1424 aa18.28■□□□□ 0.52
CLK4-201ENST00000316308 HSP90AB1P08238 724 aaKnown RBP18.28■□□□□ 0.52
CLK4-201ENST00000316308 NBPF7P0C2Y1 421 aaPredicted RBP18.27■□□□□ 0.52
CLK4-201ENST00000316308 PROSER3Q2NL68 480 aa18.27■□□□□ 0.51
CLK4-201ENST00000316308 IL1RAPL2Q9NP60 686 aa18.27■□□□□ 0.51
CLK4-201ENST00000316308 PROSER2Q86WR7 435 aaPredicted RBP18.26■□□□□ 0.51
CLK4-201ENST00000316308 ANKRD24Q8TF21 1146 aa18.26■□□□□ 0.51
CLK4-201ENST00000316308 ZNF142P52746 1687 aaPredicted RBP18.26■□□□□ 0.51
CLK4-201ENST00000316308 ADAMTSL3P82987 1691 aa18.26■□□□□ 0.51
CLK4-201ENST00000316308 UNC5CLQ8IV45 518 aa18.26■□□□□ 0.51
CLK4-201ENST00000316308 ATP8B2P98198 1209 aa18.25■□□□□ 0.51
CLK4-201ENST00000316308 PI4KAP2A4QPH2 592 aa18.25■□□□□ 0.51
CLK4-201ENST00000316308 BTBD11A6QL63 1104 aa18.25■□□□□ 0.51
CLK4-201ENST00000316308 HMMRO75330 724 aa18.25■□□□□ 0.51
CLK4-201ENST00000316308 KRT28Q7Z3Y7 464 aa18.25■□□□□ 0.51
CLK4-201ENST00000316308 PI4KAP1Q8N8J0 262 aa18.25■□□□□ 0.51
CLK4-201ENST00000316308 SALL3Q9BXA9 1300 aa18.24■□□□□ 0.51
CLK4-201ENST00000316308 KCNH5Q8NCM2 988 aa18.24■□□□□ 0.51
CLK4-201ENST00000316308 CABLES1Q8TDN4 633 aa18.24■□□□□ 0.51
CLK4-201ENST00000316308 TNPO1Q92973 898 aaKnown RBP18.24■□□□□ 0.51
CLK4-201ENST00000316308 AK9Q5TCS8 1911 aa18.24■□□□□ 0.51
CLK4-201ENST00000316308 K7ELQ4 463 aaPredicted RBP18.23■□□□□ 0.51
CLK4-201ENST00000316308 IL25Q9H293 177 aa18.23■□□□□ 0.51
CLK4-201ENST00000316308 TEFQ10587 303 aa18.23■□□□□ 0.51
CLK4-201ENST00000316308 NUTM1Q86Y26 1132 aa18.22■□□□□ 0.51
CLK4-201ENST00000316308 LRRCC1Q9C099 1032 aa18.22■□□□□ 0.51
CLK4-201ENST00000316308 RNMTO43148 476 aaKnown RBP18.22■□□□□ 0.51
CLK4-201ENST00000316308 MAP4K4O95819 1239 aaPredicted RBP18.22■□□□□ 0.51
CLK4-201ENST00000316308 GNAI3P08754 354 aa18.22■□□□□ 0.51
CLK4-201ENST00000316308 UBTFL1P0CB47 393 aaPredicted RBP18.22■□□□□ 0.51
CLK4-201ENST00000316308 PPP1R42Q7Z4L9 355 aa18.22■□□□□ 0.51
CLK4-201ENST00000316308 AKAP4Q5JQC9 854 aa18.21■□□□□ 0.51
CLK4-201ENST00000316308 RGPD5Q99666 1765 aa18.21■□□□□ 0.51
CLK4-201ENST00000316308 HSP90AA1P07900 732 aaKnown RBP18.21■□□□□ 0.51
CLK4-201ENST00000316308 IBTKQ9P2D0 1353 aaPredicted RBP18.2■□□□□ 0.5
CLK4-201ENST00000316308 MED1Q15648 1581 aaPredicted RBP18.2■□□□□ 0.5
CLK4-201ENST00000316308 MX1P20591 662 aa18.2■□□□□ 0.5
CLK4-201ENST00000316308 SLC39A6Q13433 755 aa18.2■□□□□ 0.5
CLK4-201ENST00000316308 PKP1Q13835 747 aa18.2■□□□□ 0.5
CLK4-201ENST00000316308 RILPL2Q969X0 211 aa18.2■□□□□ 0.5
CLK4-201ENST00000316308 SSFA2P28290 1259 aa18.19■□□□□ 0.5
CLK4-201ENST00000316308 PLEKHO1Q53GL0 409 aaPredicted RBP18.19■□□□□ 0.5
CLK4-201ENST00000316308 BEND3Q5T5X7 828 aa18.19■□□□□ 0.5
CLK4-201ENST00000316308 SRCIN1Q9C0H9 1055 aa18.19■□□□□ 0.5
CLK4-201ENST00000316308 OSBPL3Q9H4L5 887 aa18.19■□□□□ 0.5
CLK4-201ENST00000316308 ADCY9O60503 1353 aa18.19■□□□□ 0.5
CLK4-201ENST00000316308 SOS1Q07889 1333 aaPredicted RBP18.19■□□□□ 0.5
CLK4-201ENST00000316308 TRAK2O60296 914 aa18.18■□□□□ 0.5
CLK4-201ENST00000316308 TRIM6-TRIM34B2RNG4 842 aa18.18■□□□□ 0.5
CLK4-201ENST00000316308 CWF19L2Q2TBE0 894 aaKnown RBP18.18■□□□□ 0.5
CLK4-201ENST00000316308 DNAAF4Q8WXU2 420 aa18.18■□□□□ 0.5
CLK4-201ENST00000316308 BABAM1Q9NWV8 329 aa18.18■□□□□ 0.5
CLK4-201ENST00000316308 PALD1Q9ULE6 856 aa18.18■□□□□ 0.5
CLK4-201ENST00000316308 C1orf167Q5SNV9 1468 aa18.17■□□□□ 0.5
CLK4-201ENST00000316308 SURF6O75683 361 aaKnown RBP18.17■□□□□ 0.5
CLK4-201ENST00000316308 CHAMP1Q96JM3 812 aa18.17■□□□□ 0.5
CLK4-201ENST00000316308 KDM3BQ7LBC6 1761 aa18.17■□□□□ 0.5
CLK4-201ENST00000316308 SRGAP3O43295 1099 aa18.17■□□□□ 0.5
CLK4-201ENST00000316308 PIP4K2AP48426 406 aaPredicted RBP18.17■□□□□ 0.5
CLK4-201ENST00000316308 RAB3GAP1Q15042 981 aa18.17■□□□□ 0.5
CLK4-201ENST00000316308 CHRNA2Q15822 529 aa18.17■□□□□ 0.5
CLK4-201ENST00000316308 C1orf141Q5JVX7 400 aa18.17■□□□□ 0.5
CLK4-201ENST00000316308 SSH3Q8TE77 659 aa18.17■□□□□ 0.5
CLK4-201ENST00000316308 CACNA1FO60840 1977 aa18.17■□□□□ 0.5
CLK4-201ENST00000316308 GIGYF1O75420 1035 aaPredicted RBP18.16■□□□□ 0.5
CLK4-201ENST00000316308 ZGPATQ8N5A5 531 aaKnown RBP18.16■□□□□ 0.5
CLK4-201ENST00000316308 SLIT3O75094 1523 aa18.15■□□□□ 0.5
CLK4-201ENST00000316308 MAP3K2Q9Y2U5 619 aa18.15■□□□□ 0.5
CLK4-201ENST00000316308 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.15■□□□□ 0.5
CLK4-201ENST00000316308 TRPM3Q9HCF6 1732 aaPredicted RBP18.15■□□□□ 0.5
CLK4-201ENST00000316308 ERBB3P21860 1342 aa18.15■□□□□ 0.5
CLK4-201ENST00000316308 ERC2O15083 957 aa18.15■□□□□ 0.5
CLK4-201ENST00000316308 AIMP1Q12904 312 aaKnown RBP18.15■□□□□ 0.5
CLK4-201ENST00000316308 LMO7Q8WWI1 1683 aa18.14■□□□□ 0.5
CLK4-201ENST00000316308 C19orf44Q9H6X5 657 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms