RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 NASPP49321 788 aaPredicted RBP16.17■□□□□ 0.18
PCDHB9-201ENST00000316105 DDX54Q8TDD1 881 aaKnown RBP16.17■□□□□ 0.18
PCDHB9-201ENST00000316105 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.17■□□□□ 0.18
PCDHB9-201ENST00000316105 PLEKHG3A1L390 1219 aa16.16■□□□□ 0.18
PCDHB9-201ENST00000316105 CHL1O00533 1208 aa16.16■□□□□ 0.18
PCDHB9-201ENST00000316105 RAB11FIP3O75154 756 aa16.16■□□□□ 0.18
PCDHB9-201ENST00000316105 LMTK2Q8IWU2 1503 aa16.16■□□□□ 0.18
PCDHB9-201ENST00000316105 TNPO1Q92973 898 aaKnown RBP16.16■□□□□ 0.18
PCDHB9-201ENST00000316105 HOXC9P31274 260 aa16.16■□□□□ 0.18
PCDHB9-201ENST00000316105 PPP1R42Q7Z4L9 355 aa16.16■□□□□ 0.18
PCDHB9-201ENST00000316105 ANKRD24Q8TF21 1146 aa16.16■□□□□ 0.18
PCDHB9-201ENST00000316105 SIRT1Q96EB6 747 aa16.16■□□□□ 0.18
PCDHB9-201ENST00000316105 G2E3Q7L622 706 aa16.15■□□□□ 0.18
PCDHB9-201ENST00000316105 TOMM22Q9NS69 142 aa16.15■□□□□ 0.18
PCDHB9-201ENST00000316105 GOLGA6L6A8MZA4 724 aa16.15■□□□□ 0.18
PCDHB9-201ENST00000316105 LRRFIP1Q32MZ4 808 aaKnown RBP16.15■□□□□ 0.18
PCDHB9-201ENST00000316105 RBM42Q9BTD8 480 aaKnown RBP16.15■□□□□ 0.18
PCDHB9-201ENST00000316105 LRRC59Q96AG4 307 aaKnown RBP16.15■□□□□ 0.18
PCDHB9-201ENST00000316105 HIP1O00291 1037 aa16.14■□□□□ 0.17
PCDHB9-201ENST00000316105 SSFA2P28290 1259 aa16.14■□□□□ 0.17
PCDHB9-201ENST00000316105 QRICH2Q9H0J4 1663 aa16.14■□□□□ 0.17
PCDHB9-201ENST00000316105 CHPF2Q9P2E5 772 aa16.14■□□□□ 0.17
PCDHB9-201ENST00000316105 PSMA5P28066 241 aa16.14■□□□□ 0.17
PCDHB9-201ENST00000316105 SBNO1A3KN83 1393 aa16.14■□□□□ 0.17
PCDHB9-201ENST00000316105 MSH6P52701 1360 aa16.14■□□□□ 0.17
PCDHB9-201ENST00000316105 ATP7BP35670 1465 aa16.14■□□□□ 0.17
PCDHB9-201ENST00000316105 PDE1AP54750 535 aa16.14■□□□□ 0.17
PCDHB9-201ENST00000316105 PLEKHM2Q8IWE5 1019 aa16.14■□□□□ 0.17
PCDHB9-201ENST00000316105 RNF214Q8ND24 703 aa16.14■□□□□ 0.17
PCDHB9-201ENST00000316105 GLRX3O76003 335 aaKnown RBP16.13■□□□□ 0.17
PCDHB9-201ENST00000316105 GRPEL1Q9HAV7 217 aa16.13■□□□□ 0.17
PCDHB9-201ENST00000316105 SETBP1Q9Y6X0 1596 aa16.13■□□□□ 0.17
PCDHB9-201ENST00000316105 KIDINS220Q9ULH0 1771 aa16.13■□□□□ 0.17
PCDHB9-201ENST00000316105 MBD3O95983 291 aa16.13■□□□□ 0.17
PCDHB9-201ENST00000316105 GTF2E1P29083 439 aaPredicted RBP16.13■□□□□ 0.17
PCDHB9-201ENST00000316105 MAP3K2Q9Y2U5 619 aa16.13■□□□□ 0.17
PCDHB9-201ENST00000316105 CHAF1AQ13111 956 aaPredicted RBP16.12■□□□□ 0.17
PCDHB9-201ENST00000316105 CYP46A1Q9Y6A2 500 aa16.12■□□□□ 0.17
PCDHB9-201ENST00000316105 FAM135BQ49AJ0 1406 aa16.12■□□□□ 0.17
PCDHB9-201ENST00000316105 MAP3K5Q99683 1374 aa16.12■□□□□ 0.17
PCDHB9-201ENST00000316105 SF3A1Q15459 793 aaKnown RBP16.12■□□□□ 0.17
PCDHB9-201ENST00000316105 LARP1Q6PKG0 1096 aaKnown RBP16.12■□□□□ 0.17
PCDHB9-201ENST00000316105 IQGAP1P46940 1657 aa16.11■□□□□ 0.17
PCDHB9-201ENST00000316105 FOSBP53539 338 aa16.11■□□□□ 0.17
PCDHB9-201ENST00000316105 APPP05067 770 aa16.11■□□□□ 0.17
PCDHB9-201ENST00000316105 WASHC4Q2M389 1173 aa16.11■□□□□ 0.17
PCDHB9-201ENST00000316105 PRR36Q9H6K5 1346 aa16.11■□□□□ 0.17
PCDHB9-201ENST00000316105 FIBPO43427 364 aa16.1■□□□□ 0.17
PCDHB9-201ENST00000316105 NRDCO43847 1150 aa16.1■□□□□ 0.17
PCDHB9-201ENST00000316105 JAKMIP1Q96N16 626 aaKnown RBP16.1■□□□□ 0.17
PCDHB9-201ENST00000316105 MYD88Q99836 296 aa16.1■□□□□ 0.17
PCDHB9-201ENST00000316105 HYPKQ9NX55 129 aa16.1■□□□□ 0.17
PCDHB9-201ENST00000316105 ROBO2Q9HCK4 1378 aa16.1■□□□□ 0.17
PCDHB9-201ENST00000316105 OTUD7AQ8TE49 926 aaPredicted RBP16.1■□□□□ 0.17
PCDHB9-201ENST00000316105 ATP8B2P98198 1209 aa16.1■□□□□ 0.17
PCDHB9-201ENST00000316105 AATKQ6ZMQ8 1374 aa16.1■□□□□ 0.17
PCDHB9-201ENST00000316105 ARID3AQ99856 593 aa16.1■□□□□ 0.17
PCDHB9-201ENST00000316105 BICD2Q8TD16 824 aa16.09■□□□□ 0.17
PCDHB9-201ENST00000316105 PHF23Q9BUL5 403 aaPredicted RBP16.09■□□□□ 0.17
PCDHB9-201ENST00000316105 WDR33Q9C0J8 1336 aaKnown RBP16.09■□□□□ 0.17
PCDHB9-201ENST00000316105 PTCD1O75127 700 aaKnown RBP16.09■□□□□ 0.17
PCDHB9-201ENST00000316105 ABCC4O15439 1325 aa16.09■□□□□ 0.17
PCDHB9-201ENST00000316105 CHRNA2Q15822 529 aa16.09■□□□□ 0.17
PCDHB9-201ENST00000316105 RHPN1Q8TCX5 695 aa16.09■□□□□ 0.17
PCDHB9-201ENST00000316105 SNX21Q969T3 373 aa16.09■□□□□ 0.17
PCDHB9-201ENST00000316105 CCDC8Q9H0W5 538 aaPredicted RBP16.09■□□□□ 0.17
PCDHB9-201ENST00000316105 AKAP4Q5JQC9 854 aa16.08■□□□□ 0.17
PCDHB9-201ENST00000316105 ISY1Q9ULR0 285 aaKnown RBP16.08■□□□□ 0.17
PCDHB9-201ENST00000316105 A2ML1A8K2U0 1454 aa16.08■□□□□ 0.17
PCDHB9-201ENST00000316105 BOLA2Q9H3K6 86 aa16.08■□□□□ 0.16
PCDHB9-201ENST00000316105 PHAXQ9H814 394 aaKnown RBP16.08■□□□□ 0.16
PCDHB9-201ENST00000316105 TULP4Q9NRJ4 1543 aa16.08■□□□□ 0.16
PCDHB9-201ENST00000316105 GCP02774 474 aa16.08■□□□□ 0.16
PCDHB9-201ENST00000316105 CASTP20810 708 aaKnown RBP16.08■□□□□ 0.16
PCDHB9-201ENST00000316105 IP6K1Q92551 441 aa16.08■□□□□ 0.16
PCDHB9-201ENST00000316105 CAMSAP1Q5T5Y3 1602 aa16.08■□□□□ 0.16
PCDHB9-201ENST00000316105 CPLX1O14810 134 aa16.07■□□□□ 0.16
PCDHB9-201ENST00000316105 CHMP4CQ96CF2 233 aa16.07■□□□□ 0.16
PCDHB9-201ENST00000316105 PDRG1Q9NUG6 133 aa16.07■□□□□ 0.16
PCDHB9-201ENST00000316105 ALKQ9UM73 1620 aa16.06■□□□□ 0.16
PCDHB9-201ENST00000316105 CDK11BP21127 795 aaKnown RBP16.06■□□□□ 0.16
PCDHB9-201ENST00000316105 PRPF40BQ6NWY9 871 aaKnown RBP16.06■□□□□ 0.16
PCDHB9-201ENST00000316105 SLC39A6Q13433 755 aa16.06■□□□□ 0.16
PCDHB9-201ENST00000316105 STK3Q13188 491 aa16.06■□□□□ 0.16
PCDHB9-201ENST00000316105 BLOC1S2Q6QNY1 142 aa16.06■□□□□ 0.16
PCDHB9-201ENST00000316105 KIF6Q6ZMV9 814 aa16.06■□□□□ 0.16
PCDHB9-201ENST00000316105 TRDNQ13061 729 aa16.05■□□□□ 0.16
PCDHB9-201ENST00000316105 ECHDC1Q9NTX5 307 aa16.05■□□□□ 0.16
PCDHB9-201ENST00000316105 DIP2CQ9Y2E4 1556 aa16.05■□□□□ 0.16
PCDHB9-201ENST00000316105 RBM25P49756 843 aaKnown RBP16.05■□□□□ 0.16
PCDHB9-201ENST00000316105 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.05■□□□□ 0.16
PCDHB9-201ENST00000316105 IFNL2Q8IZJ0 200 aa16.05■□□□□ 0.16
PCDHB9-201ENST00000316105 FAM177BA6PVY3 158 aa16.05■□□□□ 0.16
PCDHB9-201ENST00000316105 PDCP20941 246 aa16.05■□□□□ 0.16
PCDHB9-201ENST00000316105 KIAA1210Q9ULL0 1709 aa16.05■□□□□ 0.16
PCDHB9-201ENST00000316105 ARHGEF10O15013 1369 aa16.04■□□□□ 0.16
PCDHB9-201ENST00000316105 ESYT1Q9BSJ8 1104 aa16.04■□□□□ 0.16
PCDHB9-201ENST00000316105 PLEKHG1Q9ULL1 1385 aa16.04■□□□□ 0.16
PCDHB9-201ENST00000316105 RALYLQ86SE5 291 aaKnown RBP16.04■□□□□ 0.16
PCDHB9-201ENST00000316105 LARP6Q9BRS8 491 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms