RNA–Protein interactions for RNA: ENST00000315585.11

CHFR-202, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-202ENST00000315585 ZNF335Q9H4Z2 1342 aaPredicted RBP18.49■□□□□ 0.55
CHFR-202ENST00000315585 TAF7Q15545 349 aaPredicted RBP18.49■□□□□ 0.55
CHFR-202ENST00000315585 PLEKHG5O94827 1062 aa18.48■□□□□ 0.55
CHFR-202ENST00000315585 CAMTA1Q9Y6Y1 1673 aa18.48■□□□□ 0.55
CHFR-202ENST00000315585 L1TD1Q5T7N2 865 aaKnown RBP18.48■□□□□ 0.55
CHFR-202ENST00000315585 BRINP3Q76B58 766 aa18.48■□□□□ 0.55
CHFR-202ENST00000315585 STK31Q9BXU1 1019 aa18.48■□□□□ 0.55
CHFR-202ENST00000315585 SLC4A2P04920 1241 aa18.47■□□□□ 0.55
CHFR-202ENST00000315585 CHMP4AQ9BY43 222 aa18.47■□□□□ 0.55
CHFR-202ENST00000315585 SLAIN2Q9P270 581 aa18.47■□□□□ 0.55
CHFR-202ENST00000315585 PTMSP20962 102 aa18.47■□□□□ 0.55
CHFR-202ENST00000315585 ZC3H6P61129 1189 aaKnown RBP18.47■□□□□ 0.55
CHFR-202ENST00000315585 AKAP4Q5JQC9 854 aa18.47■□□□□ 0.55
CHFR-202ENST00000315585 TBC1D9Q6ZT07 1266 aa18.47■□□□□ 0.55
CHFR-202ENST00000315585 LRRC59Q96AG4 307 aaKnown RBP18.47■□□□□ 0.55
CHFR-202ENST00000315585 IL17REQ8NFR9 667 aa18.46■□□□□ 0.55
CHFR-202ENST00000315585 DDX17Q92841 729 aaKnown RBP18.46■□□□□ 0.55
CHFR-202ENST00000315585 ERBB3P21860 1342 aa18.46■□□□□ 0.55
CHFR-202ENST00000315585 DDX11L8A8MPP1 907 aa18.45■□□□□ 0.54
CHFR-202ENST00000315585 HSP90AB1P08238 724 aaKnown RBP18.45■□□□□ 0.54
CHFR-202ENST00000315585 MCM4P33991 863 aa18.45■□□□□ 0.54
CHFR-202ENST00000315585 C1orf141Q5JVX7 400 aa18.45■□□□□ 0.54
CHFR-202ENST00000315585 CEP85Q6P2H3 762 aa18.45■□□□□ 0.54
CHFR-202ENST00000315585 PLEKHM2Q8IWE5 1019 aa18.45■□□□□ 0.54
CHFR-202ENST00000315585 RGPD2P0DJD1 1756 aa18.45■□□□□ 0.54
CHFR-202ENST00000315585 PLEKHG2Q9H7P9 1386 aa18.45■□□□□ 0.54
CHFR-202ENST00000315585 CEMIPQ8WUJ3 1361 aa18.44■□□□□ 0.54
CHFR-202ENST00000315585 RGS12O14924 1447 aa18.44■□□□□ 0.54
CHFR-202ENST00000315585 CCDC30Q5VVM6 783 aa18.44■□□□□ 0.54
CHFR-202ENST00000315585 ZNF530Q6P9A1 599 aaPredicted RBP18.44■□□□□ 0.54
CHFR-202ENST00000315585 AXIN2Q9Y2T1 843 aa18.44■□□□□ 0.54
CHFR-202ENST00000315585 CPDO75976 1380 aa18.44■□□□□ 0.54
CHFR-202ENST00000315585 LMO7Q8WWI1 1683 aa18.43■□□□□ 0.54
CHFR-202ENST00000315585 TTC22Q5TAA0 569 aa18.43■□□□□ 0.54
CHFR-202ENST00000315585 MIS18AQ9NYP9 233 aa18.43■□□□□ 0.54
CHFR-202ENST00000315585 OVOS2A0A0G2JMS6 1433 aa18.43■□□□□ 0.54
CHFR-202ENST00000315585 FAM208AQ9UK61 1670 aaKnown RBP18.43■□□□□ 0.54
CHFR-202ENST00000315585 HSP90AA1P07900 732 aaKnown RBP18.42■□□□□ 0.54
CHFR-202ENST00000315585 ATP10DQ9P241 1426 aa18.42■□□□□ 0.54
CHFR-202ENST00000315585 SOS2Q07890 1332 aaPredicted RBP18.42■□□□□ 0.54
CHFR-202ENST00000315585 KRT24Q2M2I5 525 aa18.41■□□□□ 0.54
CHFR-202ENST00000315585 GNAI3P08754 354 aa18.41■□□□□ 0.54
CHFR-202ENST00000315585 TEFQ10587 303 aa18.41■□□□□ 0.54
CHFR-202ENST00000315585 SPRYD3Q8NCJ5 442 aa18.41■□□□□ 0.54
CHFR-202ENST00000315585 RAPGEF4Q8WZA2 1011 aa18.41■□□□□ 0.54
CHFR-202ENST00000315585 GBP4Q96PP9 640 aa18.41■□□□□ 0.54
CHFR-202ENST00000315585 CRYBG1Q9Y4K1 1723 aa18.4■□□□□ 0.54
CHFR-202ENST00000315585 RGPD5Q99666 1765 aa18.4■□□□□ 0.54
CHFR-202ENST00000315585 K7ELQ4 463 aaPredicted RBP18.4■□□□□ 0.54
CHFR-202ENST00000315585 RABEP1Q15276 862 aa18.4■□□□□ 0.54
CHFR-202ENST00000315585 COL18A1P39060 1754 aa18.39■□□□□ 0.53
CHFR-202ENST00000315585 GNAI2P04899 355 aa18.39■□□□□ 0.53
CHFR-202ENST00000315585 CSB-PGBD3P0DP91 1061 aa18.39■□□□□ 0.53
CHFR-202ENST00000315585 NLRP2Q9NX02 1062 aa18.39■□□□□ 0.53
CHFR-202ENST00000315585 REC8O95072 547 aa18.38■□□□□ 0.53
CHFR-202ENST00000315585 TATP17735 454 aaPredicted RBP18.38■□□□□ 0.53
CHFR-202ENST00000315585 MEIS3Q99687 375 aa18.38■□□□□ 0.53
CHFR-202ENST00000315585 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.38■□□□□ 0.53
CHFR-202ENST00000315585 HOXB7P09629 217 aa18.38■□□□□ 0.53
CHFR-202ENST00000315585 GSPT1P15170 499 aaKnown RBP18.38■□□□□ 0.53
CHFR-202ENST00000315585 DDIT3P35638 169 aa18.38■□□□□ 0.53
CHFR-202ENST00000315585 CABLES1Q8TDN4 633 aa18.38■□□□□ 0.53
CHFR-202ENST00000315585 ISY1Q9ULR0 285 aaKnown RBP18.38■□□□□ 0.53
CHFR-202ENST00000315585 SPG7Q9UQ90 795 aa18.37■□□□□ 0.53
CHFR-202ENST00000315585 RNMTO43148 476 aaKnown RBP18.37■□□□□ 0.53
CHFR-202ENST00000315585 SLC4A10Q6U841 1118 aa18.37■□□□□ 0.53
CHFR-202ENST00000315585 KIF2CQ99661 725 aa18.37■□□□□ 0.53
CHFR-202ENST00000315585 OSBPL3Q9H4L5 887 aa18.37■□□□□ 0.53
CHFR-202ENST00000315585 SKOR2Q2VWA4 1001 aaPredicted RBP18.36■□□□□ 0.53
CHFR-202ENST00000315585 LGR6Q9HBX8 967 aa18.35■□□□□ 0.53
CHFR-202ENST00000315585 CACNA1FO60840 1977 aa18.35■□□□□ 0.53
CHFR-202ENST00000315585 BTBD11A6QL63 1104 aa18.34■□□□□ 0.53
CHFR-202ENST00000315585 TRAK2O60296 914 aa18.34■□□□□ 0.53
CHFR-202ENST00000315585 FLIIQ13045 1269 aa18.34■□□□□ 0.53
CHFR-202ENST00000315585 FKBP5Q13451 457 aaPredicted RBP18.34■□□□□ 0.53
CHFR-202ENST00000315585 MPRIPQ6WCQ1 1025 aa18.34■□□□□ 0.53
CHFR-202ENST00000315585 PRDM11Q9NQV5 511 aa18.33■□□□□ 0.53
CHFR-202ENST00000315585 NHSL1Q5SYE7 1610 aa18.33■□□□□ 0.53
CHFR-202ENST00000315585 KDM3BQ7LBC6 1761 aa18.33■□□□□ 0.53
CHFR-202ENST00000315585 GOLGA6L3A6NEY3 463 aa18.33■□□□□ 0.52
CHFR-202ENST00000315585 GOLGA6L22H0YM25 854 aa18.33■□□□□ 0.52
CHFR-202ENST00000315585 RAB3GAP1Q15042 981 aa18.33■□□□□ 0.52
CHFR-202ENST00000315585 CHRNA2Q15822 529 aa18.33■□□□□ 0.52
CHFR-202ENST00000315585 IL27Q8NEV9 243 aa18.33■□□□□ 0.52
CHFR-202ENST00000315585 EIF4A1P60842 406 aaKnown RBP18.32■□□□□ 0.52
CHFR-202ENST00000315585 USP26Q9BXU7 913 aa18.32■□□□□ 0.52
CHFR-202ENST00000315585 ST18O60284 1047 aa18.32■□□□□ 0.52
CHFR-202ENST00000315585 SDSP20132 328 aa18.32■□□□□ 0.52
CHFR-202ENST00000315585 HDGFL1Q5TGJ6 251 aa18.32■□□□□ 0.52
CHFR-202ENST00000315585 SRCIN1Q9C0H9 1055 aa18.32■□□□□ 0.52
CHFR-202ENST00000315585 PXDNLA1KZ92 1463 aa18.32■□□□□ 0.52
CHFR-202ENST00000315585 G2E3Q7L622 706 aa18.31■□□□□ 0.52
CHFR-202ENST00000315585 C16orf71Q8IYS4 520 aaPredicted RBP18.31■□□□□ 0.52
CHFR-202ENST00000315585 BRPF3Q9ULD4 1205 aa18.31■□□□□ 0.52
CHFR-202ENST00000315585 ERC2O15083 957 aa18.3■□□□□ 0.52
CHFR-202ENST00000315585 IFNL2Q8IZJ0 200 aa18.3■□□□□ 0.52
CHFR-202ENST00000315585 LRRCC1Q9C099 1032 aa18.3■□□□□ 0.52
CHFR-202ENST00000315585 ADAMTS7Q9UKP4 1686 aa18.3■□□□□ 0.52
CHFR-202ENST00000315585 ATP8B2P98198 1209 aa18.3■□□□□ 0.52
CHFR-202ENST00000315585 CWC22Q9HCG8 908 aaKnown RBP18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms