RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 NLRP2Q9NX02 1062 aa23.08■■□□□ 1.29
CCDC43-201ENST00000315286 KDM3BQ7LBC6 1761 aa23.07■■□□□ 1.28
CCDC43-201ENST00000315286 FLIIQ13045 1269 aa23.07■■□□□ 1.28
CCDC43-201ENST00000315286 CHRNA2Q15822 529 aa23.07■■□□□ 1.28
CCDC43-201ENST00000315286 SLC4A10Q6U841 1118 aa23.07■■□□□ 1.28
CCDC43-201ENST00000315286 SLAIN2Q9P270 581 aa23.07■■□□□ 1.28
CCDC43-201ENST00000315286 CRYBG1Q9Y4K1 1723 aa23.07■■□□□ 1.28
CCDC43-201ENST00000315286 KCNQ3O43525 872 aa23.07■■□□□ 1.28
CCDC43-201ENST00000315286 MEIS3Q99687 375 aa23.07■■□□□ 1.28
CCDC43-201ENST00000315286 ANKRD45Q5TZF3 282 aa23.06■■□□□ 1.28
CCDC43-201ENST00000315286 BTBD11A6QL63 1104 aa23.05■■□□□ 1.28
CCDC43-201ENST00000315286 CCT4P50991 539 aaKnown RBP23.05■■□□□ 1.28
CCDC43-201ENST00000315286 HDGFL1Q5TGJ6 251 aa23.05■■□□□ 1.28
CCDC43-201ENST00000315286 FKBP5Q13451 457 aaPredicted RBP23.04■■□□□ 1.28
CCDC43-201ENST00000315286 ANKRD44Q8N8A2 993 aa23.04■■□□□ 1.28
CCDC43-201ENST00000315286 RAPGEF4Q8WZA2 1011 aa23.04■■□□□ 1.28
CCDC43-201ENST00000315286 ATP10DQ9P241 1426 aa23.04■■□□□ 1.28
CCDC43-201ENST00000315286 CSB-PGBD3P0DP91 1061 aa23.03■■□□□ 1.28
CCDC43-201ENST00000315286 DDRGK1Q96HY6 314 aa23.03■■□□□ 1.28
CCDC43-201ENST00000315286 OVOS2A0A0G2JMS6 1433 aa23.02■■□□□ 1.28
CCDC43-201ENST00000315286 CEP85Q6P2H3 762 aa23.02■■□□□ 1.28
CCDC43-201ENST00000315286 RPAP2Q8IXW5 612 aaPredicted RBP23.02■■□□□ 1.28
CCDC43-201ENST00000315286 CPDO75976 1380 aa23.01■■□□□ 1.27
CCDC43-201ENST00000315286 SOS2Q07890 1332 aaPredicted RBP23.01■■□□□ 1.27
CCDC43-201ENST00000315286 EIF2S2P20042 333 aaKnown RBP23.01■■□□□ 1.27
CCDC43-201ENST00000315286 DCTPP1Q9H773 170 aa23.01■■□□□ 1.27
CCDC43-201ENST00000315286 HOXB7P09629 217 aa23.01■■□□□ 1.27
CCDC43-201ENST00000315286 TATP17735 454 aaPredicted RBP23■■□□□ 1.27
CCDC43-201ENST00000315286 ABCC6O95255 1503 aa22.99■■□□□ 1.27
CCDC43-201ENST00000315286 PHAXQ9H814 394 aaKnown RBP22.99■■□□□ 1.27
CCDC43-201ENST00000315286 ADAMTS7Q9UKP4 1686 aa22.98■■□□□ 1.27
CCDC43-201ENST00000315286 MEGF6O75095 1541 aa22.98■■□□□ 1.27
CCDC43-201ENST00000315286 SIPA1L3O60292 1781 aaPredicted RBP22.98■■□□□ 1.27
CCDC43-201ENST00000315286 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.96■■□□□ 1.278e-6■■■□□ 14.7
CCDC43-201ENST00000315286 CHPF2Q9P2E5 772 aa22.96■■□□□ 1.27
CCDC43-201ENST00000315286 SPG7Q9UQ90 795 aa22.96■■□□□ 1.27
CCDC43-201ENST00000315286 PHKG2P15735 406 aa22.95■■□□□ 1.26
CCDC43-201ENST00000315286 CHMP4AQ9BY43 222 aa22.95■■□□□ 1.26
CCDC43-201ENST00000315286 HEG1Q9ULI3 1381 aa22.94■■□□□ 1.26
CCDC43-201ENST00000315286 GIGYF1O75420 1035 aaPredicted RBP22.94■■□□□ 1.26
CCDC43-201ENST00000315286 SCN11AQ9UI33 1791 aa22.93■■□□□ 1.26
CCDC43-201ENST00000315286 GNAI2P04899 355 aa22.93■■□□□ 1.26
CCDC43-201ENST00000315286 PRDM11Q9NQV5 511 aa22.93■■□□□ 1.26
CCDC43-201ENST00000315286 KDM6AO15550 1401 aaPredicted RBP22.93■■□□□ 1.26
CCDC43-201ENST00000315286 N4BP2Q86UW6 1770 aaPredicted RBP22.92■■□□□ 1.26
CCDC43-201ENST00000315286 IFNL2Q8IZJ0 200 aa22.92■■□□□ 1.26
CCDC43-201ENST00000315286 UPF2Q9HAU5 1272 aaKnown RBP22.92■■□□□ 1.26
CCDC43-201ENST00000315286 PXDNLA1KZ92 1463 aa22.92■■□□□ 1.26
CCDC43-201ENST00000315286 ANXA1P04083 346 aa22.91■■□□□ 1.26
CCDC43-201ENST00000315286 GNAI3P08754 354 aa22.91■■□□□ 1.26
CCDC43-201ENST00000315286 BMP2KLQ5H9B9 411 aa22.91■■□□□ 1.26
CCDC43-201ENST00000315286 SLC4A3P48751 1232 aa22.91■■□□□ 1.26
CCDC43-201ENST00000315286 SLC52A2Q9HAB3 445 aa22.91■■□□□ 1.26
CCDC43-201ENST00000315286 PRAMEF22A3QJZ6 481 aa22.9■■□□□ 1.26
CCDC43-201ENST00000315286 CYP27B1O15528 508 aa22.89■■□□□ 1.26
CCDC43-201ENST00000315286 HMMRO75330 724 aa22.89■■□□□ 1.26
CCDC43-201ENST00000315286 TBC1D32Q96NH3 1257 aa22.89■■□□□ 1.26
CCDC43-201ENST00000315286 USP44Q9H0E7 712 aa22.89■■□□□ 1.26
CCDC43-201ENST00000315286 DBF4Q9UBU7 674 aaPredicted RBP22.89■■□□□ 1.26
CCDC43-201ENST00000315286 NFATC2IPQ8NCF5 419 aa22.89■■□□□ 1.25
CCDC43-201ENST00000315286 SLC39A6Q13433 755 aa22.88■■□□□ 1.25
CCDC43-201ENST00000315286 C16orf71Q8IYS4 520 aaPredicted RBP22.88■■□□□ 1.25
CCDC43-201ENST00000315286 PLEKHG2Q9H7P9 1386 aa22.88■■□□□ 1.25
CCDC43-201ENST00000315286 PI4KAP2A4QPH2 592 aa22.88■■□□□ 1.25
CCDC43-201ENST00000315286 ZNF790Q6PG37 636 aa22.88■■□□□ 1.25
CCDC43-201ENST00000315286 PKD1L3Q7Z443 1732 aa22.88■■□□□ 1.25
CCDC43-201ENST00000315286 PLEKHM2Q8IWE5 1019 aa22.88■■□□□ 1.25
CCDC43-201ENST00000315286 WDR17Q8IZU2 1322 aa22.88■■□□□ 1.25
CCDC43-201ENST00000315286 PI4KAP1Q8N8J0 262 aa22.88■■□□□ 1.25
CCDC43-201ENST00000315286 BCL11AQ9H165 835 aa22.87■■□□□ 1.25
CCDC43-201ENST00000315286 APBB1O00213 710 aa22.86■■□□□ 1.25
CCDC43-201ENST00000315286 ABCA3Q99758 1704 aa22.86■■□□□ 1.25
CCDC43-201ENST00000315286 SMARCA5O60264 1052 aaPredicted RBP22.86■■□□□ 1.25
CCDC43-201ENST00000315286 MFAP1P55081 439 aaKnown RBP22.86■■□□□ 1.25
CCDC43-201ENST00000315286 PROSER3Q2NL68 480 aa22.86■■□□□ 1.25
CCDC43-201ENST00000315286 TOM1L2Q6ZVM7 507 aa22.86■■□□□ 1.25
CCDC43-201ENST00000315286 DNAAF4Q8WXU2 420 aa22.86■■□□□ 1.25
CCDC43-201ENST00000315286 DCAF5Q96JK2 942 aa22.86■■□□□ 1.25
CCDC43-201ENST00000315286 SRCIN1Q9C0H9 1055 aa22.86■■□□□ 1.25
CCDC43-201ENST00000315286 DAXXQ9UER7 740 aaPredicted RBP22.86■■□□□ 1.25
CCDC43-201ENST00000315286 NHSL1Q5SYE7 1610 aa22.86■■□□□ 1.25
CCDC43-201ENST00000315286 LRRFIP2Q9Y608 721 aaKnown RBP22.85■■□□□ 1.25
CCDC43-201ENST00000315286 ATP8B2P98198 1209 aa22.85■■□□□ 1.25
CCDC43-201ENST00000315286 BEND3Q5T5X7 828 aa22.84■■□□□ 1.25
CCDC43-201ENST00000315286 COL5A2P05997 1499 aaPredicted RBP22.84■■□□□ 1.25
CCDC43-201ENST00000315286 ADCY9O60503 1353 aa22.84■■□□□ 1.25
CCDC43-201ENST00000315286 PNMA6EA0A0J9YXQ4 647 aa22.83■■□□□ 1.25
CCDC43-201ENST00000315286 UBTFL1P0CB47 393 aaPredicted RBP22.83■■□□□ 1.25
CCDC43-201ENST00000315286 OTUD7AQ8TE49 926 aaPredicted RBP22.83■■□□□ 1.25
CCDC43-201ENST00000315286 HSP90AB1P08238 724 aaKnown RBP22.82■■□□□ 1.24
CCDC43-201ENST00000315286 GSPT1P15170 499 aaKnown RBP22.81■■□□□ 1.24
CCDC43-201ENST00000315286 C22orf23Q9BZE7 217 aa22.81■■□□□ 1.24
CCDC43-201ENST00000315286 EXOC6BQ9Y2D4 811 aa22.81■■□□□ 1.24
CCDC43-201ENST00000315286 MRC1P22897 1456 aa22.81■■□□□ 1.24
CCDC43-201ENST00000315286 HYPKQ9NX55 129 aa22.8■■□□□ 1.24
CCDC43-201ENST00000315286 PDIA6Q15084 440 aa22.8■■□□□ 1.24
CCDC43-201ENST00000315286 ZNF496Q96IT1 587 aaPredicted RBP22.8■■□□□ 1.24
CCDC43-201ENST00000315286 DDX21Q9NR30 783 aaKnown RBP eCLIP22.8■■□□□ 1.24
CCDC43-201ENST00000315286 C5P01031 1676 aa22.79■■□□□ 1.24
CCDC43-201ENST00000315286 TTC22Q5TAA0 569 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms