RNA–Protein interactions for RNA: ENST00000315251.10

CHDH-201, Transcript of choline dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHDH, Length 7,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHDH-201ENST00000315251 PPP6R1Q9UPN7 881 aa17.54■□□□□ 0.4
CHDH-201ENST00000315251 POLR3GO15318 223 aaPredicted RBP17.54■□□□□ 0.4
CHDH-201ENST00000315251 KIF4BQ2VIQ3 1234 aa17.54■□□□□ 0.4
CHDH-201ENST00000315251 CCDC83Q8IWF9 413 aa17.54■□□□□ 0.4
CHDH-201ENST00000315251 URI1O94763 535 aaPredicted RBP17.54■□□□□ 0.4
CHDH-201ENST00000315251 METTL24Q5JXM2 366 aa17.54■□□□□ 0.4
CHDH-201ENST00000315251 DNAI2Q9GZS0 605 aa17.54■□□□□ 0.4
CHDH-201ENST00000315251 SFPQP23246 707 aaKnown RBP eCLIP17.54■□□□□ 0.4
CHDH-201ENST00000315251 MROH2BQ7Z745 1585 aa17.53■□□□□ 0.4
CHDH-201ENST00000315251 RRBP1Q9P2E9 1410 aaKnown RBP17.53■□□□□ 0.4
CHDH-201ENST00000315251 KRT32Q14532 448 aa17.53■□□□□ 0.4
CHDH-201ENST00000315251 NUP88Q99567 741 aaPredicted RBP17.53■□□□□ 0.4
CHDH-201ENST00000315251 CPLX3Q8WVH0 158 aa17.53■□□□□ 0.4
CHDH-201ENST00000315251 TRERF1Q96PN7 1200 aa17.53■□□□□ 0.4
CHDH-201ENST00000315251 XPCQ01831 940 aaPredicted RBP17.53■□□□□ 0.4
CHDH-201ENST00000315251 SPECC1Q5M775 1068 aa17.53■□□□□ 0.4
CHDH-201ENST00000315251 ATF7IPQ6VMQ6 1270 aa17.53■□□□□ 0.4
CHDH-201ENST00000315251 CDK19Q9BWU1 502 aa17.53■□□□□ 0.4
CHDH-201ENST00000315251 RBM25P49756 843 aaKnown RBP17.52■□□□□ 0.4
CHDH-201ENST00000315251 MAP9Q49MG5 647 aa17.52■□□□□ 0.4
CHDH-201ENST00000315251 GRIPAP1Q4V328 841 aa17.52■□□□□ 0.4
CHDH-201ENST00000315251 CCDC150Q8NCX0 1101 aa17.52■□□□□ 0.4
CHDH-201ENST00000315251 PDE3AQ14432 1141 aa17.52■□□□□ 0.4
CHDH-201ENST00000315251 ZSCAN31Q96LW9 406 aaPredicted RBP17.52■□□□□ 0.4
CHDH-201ENST00000315251 RRS1Q15050 365 aaKnown RBP17.52■□□□□ 0.4
CHDH-201ENST00000315251 TDRD12Q587J7 1177 aaKnown RBP17.52■□□□□ 0.4
CHDH-201ENST00000315251 PAXIP1Q6ZW49 1069 aaPredicted RBP17.52■□□□□ 0.4
CHDH-201ENST00000315251 VPS36Q86VN1 386 aa17.52■□□□□ 0.4
CHDH-201ENST00000315251 SMC1AQ14683 1233 aaKnown RBP17.52■□□□□ 0.39
CHDH-201ENST00000315251 SPTY2D1Q68D10 685 aaPredicted RBP17.52■□□□□ 0.39
CHDH-201ENST00000315251 ANKIB1Q9P2G1 1089 aa17.52■□□□□ 0.39
CHDH-201ENST00000315251 WDR70Q9NW82 654 aa17.51■□□□□ 0.39
CHDH-201ENST00000315251 TTLL12Q14166 644 aaPredicted RBP17.51■□□□□ 0.39
CHDH-201ENST00000315251 CCDC96Q2M329 555 aa17.51■□□□□ 0.39
CHDH-201ENST00000315251 SLC12A5Q9H2X9 1139 aa17.51■□□□□ 0.39
CHDH-201ENST00000315251 MIS18AQ9NYP9 233 aa17.51■□□□□ 0.39
CHDH-201ENST00000315251 TRMT1Q9NXH9 659 aaKnown RBP17.51■□□□□ 0.39
CHDH-201ENST00000315251 EXOC6BQ9Y2D4 811 aa17.51■□□□□ 0.39
CHDH-201ENST00000315251 GCOM1H8Y6P7 765 aaPredicted RBP17.51■□□□□ 0.39
CHDH-201ENST00000315251 MYZAPP0CAP1 466 aa17.51■□□□□ 0.39
CHDH-201ENST00000315251 GBP3Q9H0R5 595 aa17.51■□□□□ 0.39
CHDH-201ENST00000315251 ESPNB1AK53 854 aa17.5■□□□□ 0.39
CHDH-201ENST00000315251 TOP1P11387 765 aaKnown RBP17.5■□□□□ 0.39
CHDH-201ENST00000315251 PRPF4BQ13523 1007 aaKnown RBP17.5■□□□□ 0.39
CHDH-201ENST00000315251 HLTFQ14527 1009 aaKnown RBP eCLIP17.5■□□□□ 0.398e-7■■□□□ 11.8
CHDH-201ENST00000315251 MVPQ14764 893 aaKnown RBP17.5■□□□□ 0.39
CHDH-201ENST00000315251 PPM1EQ8WY54 764 aa17.5■□□□□ 0.39
CHDH-201ENST00000315251 CABP1Q9NZU7 370 aa17.5■□□□□ 0.39
CHDH-201ENST00000315251 PNISRQ8TF01 805 aaKnown RBP17.5■□□□□ 0.39
CHDH-201ENST00000315251 FERMT2Q96AC1 680 aa17.49■□□□□ 0.39
CHDH-201ENST00000315251 DRC1Q96MC2 740 aa17.49■□□□□ 0.39
CHDH-201ENST00000315251 ZSCAN12O43309 604 aa17.49■□□□□ 0.39
CHDH-201ENST00000315251 PRKCSHP14314 528 aaPredicted RBP17.49■□□□□ 0.39
CHDH-201ENST00000315251 RANBP6O60518 1105 aaKnown RBP17.49■□□□□ 0.39
CHDH-201ENST00000315251 KIF18AQ8NI77 898 aa17.49■□□□□ 0.39
CHDH-201ENST00000315251 ZNF287Q9HBT7 754 aa17.49■□□□□ 0.39
CHDH-201ENST00000315251 U3KPZ7 1027 aaPredicted RBP17.49■□□□□ 0.39
CHDH-201ENST00000315251 BOLA2Q9H3K6 86 aa17.48■□□□□ 0.39
CHDH-201ENST00000315251 PRDM11Q9NQV5 511 aa17.48■□□□□ 0.39
CHDH-201ENST00000315251 TMCO5BA8MYB1 307 aa17.48■□□□□ 0.39
CHDH-201ENST00000315251 MYOM3Q5VTT5 1437 aa17.48■□□□□ 0.39
CHDH-201ENST00000315251 NAPBQ9H115 298 aa17.48■□□□□ 0.39
CHDH-201ENST00000315251 MCM4P33991 863 aa17.48■□□□□ 0.39
CHDH-201ENST00000315251 DZIP1Q86YF9 867 aaKnown RBP17.48■□□□□ 0.39
CHDH-201ENST00000315251 ZFP91Q96JP5 570 aaPredicted RBP17.48■□□□□ 0.39
CHDH-201ENST00000315251 HOMER2Q9NSB8 354 aa17.48■□□□□ 0.39
CHDH-201ENST00000315251 PTCD1O75127 700 aaKnown RBP17.47■□□□□ 0.39
CHDH-201ENST00000315251 ARHGAP5Q13017 1502 aa17.47■□□□□ 0.39
CHDH-201ENST00000315251 SMARCA5O60264 1052 aaPredicted RBP17.47■□□□□ 0.39
CHDH-201ENST00000315251 CAVIN4Q5BKX8 364 aa17.47■□□□□ 0.39
CHDH-201ENST00000315251 PRPF40BQ6NWY9 871 aaKnown RBP17.47■□□□□ 0.39
CHDH-201ENST00000315251 IPO4Q8TEX9 1081 aaKnown RBP17.47■□□□□ 0.39
CHDH-201ENST00000315251 PUF60Q9UHX1 559 aaKnown RBP17.47■□□□□ 0.39
CHDH-201ENST00000315251 PAFAH1B1P43034 410 aa17.47■□□□□ 0.39
CHDH-201ENST00000315251 SLC4A8Q2Y0W8 1093 aa17.47■□□□□ 0.39
CHDH-201ENST00000315251 OSCARQ8IYS5 282 aa17.46■□□□□ 0.39
CHDH-201ENST00000315251 CCDC175P0C221 793 aa17.46■□□□□ 0.39
CHDH-201ENST00000315251 C8orf76Q96K31 380 aa17.46■□□□□ 0.39
CHDH-201ENST00000315251 DDX23Q9BUQ8 820 aaKnown RBP17.46■□□□□ 0.39
CHDH-201ENST00000315251 CLIP2Q9UDT6 1046 aa17.46■□□□□ 0.39
CHDH-201ENST00000315251 LARP6Q9BRS8 491 aaKnown RBP17.46■□□□□ 0.39
CHDH-201ENST00000315251 ZNF219Q9P2Y4 722 aaPredicted RBP17.46■□□□□ 0.39
CHDH-201ENST00000315251 ANO10Q9NW15 660 aa17.46■□□□□ 0.39
CHDH-201ENST00000315251 FYCO1Q9BQS8 1478 aa17.46■□□□□ 0.39
CHDH-201ENST00000315251 TCERG1LQ5VWI1 586 aa17.46■□□□□ 0.39
CHDH-201ENST00000315251 GPATCH11Q8N954 259 aa17.45■□□□□ 0.38
CHDH-201ENST00000315251 CUL5Q93034 780 aa17.45■□□□□ 0.38
CHDH-201ENST00000315251 BACH2Q9BYV9 841 aa17.45■□□□□ 0.38
CHDH-201ENST00000315251 USO1O60763 962 aaKnown RBP17.45■□□□□ 0.38
CHDH-201ENST00000315251 ZNF444Q8N0Y2 327 aaPredicted RBP17.45■□□□□ 0.38
CHDH-201ENST00000315251 NOP2P46087 812 aaKnown RBP17.45■□□□□ 0.38
CHDH-201ENST00000315251 CKAP2LQ8IYA6 745 aa17.45■□□□□ 0.38
CHDH-201ENST00000315251 ISM2Q6H9L7 571 aa17.45■□□□□ 0.38
CHDH-201ENST00000315251 CCDC144CPQ8IYA2 1237 aa17.45■□□□□ 0.38
CHDH-201ENST00000315251 ZPR1O75312 459 aa17.45■□□□□ 0.38
CHDH-201ENST00000315251 FGFR1OPO95684 399 aaKnown RBP17.44■□□□□ 0.38
CHDH-201ENST00000315251 STARD3NLO95772 234 aa17.44■□□□□ 0.38
CHDH-201ENST00000315251 C16orf45Q96MC5 204 aaPredicted RBP17.44■□□□□ 0.38
CHDH-201ENST00000315251 ZC3H6P61129 1189 aaKnown RBP17.44■□□□□ 0.38
CHDH-201ENST00000315251 TMEM266Q2M3C6 531 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms