RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 PRPF40BQ6NWY9 871 aaKnown RBP22.11■■□□□ 1.13
CDK5R1-201ENST00000313401 CCDC8Q9H0W5 538 aaPredicted RBP22.11■■□□□ 1.13
CDK5R1-201ENST00000313401 PHAXQ9H814 394 aaKnown RBP22.11■■□□□ 1.13
CDK5R1-201ENST00000313401 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.11■■□□□ 1.13
CDK5R1-201ENST00000313401 MAP3K4Q9Y6R4 1608 aa22.1■■□□□ 1.13
CDK5R1-201ENST00000313401 ZSCAN30Q86W11 494 aa22.1■■□□□ 1.13
CDK5R1-201ENST00000313401 UHRF1BP1LA0JNW5 1464 aa22.1■■□□□ 1.13
CDK5R1-201ENST00000313401 ZFYVE9O95405 1425 aa22.1■■□□□ 1.13
CDK5R1-201ENST00000313401 WDR33Q9C0J8 1336 aaKnown RBP22.09■■□□□ 1.13
CDK5R1-201ENST00000313401 GAS2L3Q86XJ1 694 aa22.09■■□□□ 1.13
CDK5R1-201ENST00000313401 CHL1O00533 1208 aa22.09■■□□□ 1.13
CDK5R1-201ENST00000313401 GNL2Q13823 731 aaKnown RBP22.09■■□□□ 1.13
CDK5R1-201ENST00000313401 KDM4AO75164 1064 aa22.08■■□□□ 1.13
CDK5R1-201ENST00000313401 TCEANC2Q96MN5 208 aa22.08■■□□□ 1.13
CDK5R1-201ENST00000313401 BOLA2Q9H3K6 86 aa22.08■■□□□ 1.13
CDK5R1-201ENST00000313401 KIF1BO60333 1816 aa22.08■■□□□ 1.13
CDK5R1-201ENST00000313401 PRIM1P49642 420 aaKnown RBP22.08■■□□□ 1.13
CDK5R1-201ENST00000313401 KIF1BPQ96EK5 621 aa22.08■■□□□ 1.13
CDK5R1-201ENST00000313401 ESYT1Q9BSJ8 1104 aa22.08■■□□□ 1.12
CDK5R1-201ENST00000313401 TET3O43151 1660 aa22.08■■□□□ 1.12
CDK5R1-201ENST00000313401 PNMA6EA0A0J9YXQ4 647 aa22.07■■□□□ 1.12
CDK5R1-201ENST00000313401 RNF20Q5VTR2 975 aa22.07■■□□□ 1.12
CDK5R1-201ENST00000313401 CYP46A1Q9Y6A2 500 aa22.07■■□□□ 1.12
CDK5R1-201ENST00000313401 DNAAF4Q8WXU2 420 aa22.07■■□□□ 1.12
CDK5R1-201ENST00000313401 SPHKAPQ2M3C7 1700 aa22.07■■□□□ 1.12
CDK5R1-201ENST00000313401 CHPF2Q9P2E5 772 aa22.07■■□□□ 1.12
CDK5R1-201ENST00000313401 PPFIA3O75145 1194 aa22.06■■□□□ 1.12
CDK5R1-201ENST00000313401 CPA1P15085 419 aa22.06■■□□□ 1.12
CDK5R1-201ENST00000313401 SF3A1Q15459 793 aaKnown RBP22.06■■□□□ 1.12
CDK5R1-201ENST00000313401 ABCC4O15439 1325 aa22.06■■□□□ 1.12
CDK5R1-201ENST00000313401 CCDC39Q9UFE4 941 aa22.05■■□□□ 1.12
CDK5R1-201ENST00000313401 ABCA6Q8N139 1617 aa22.05■■□□□ 1.12
CDK5R1-201ENST00000313401 LRRC59Q96AG4 307 aaKnown RBP22.05■■□□□ 1.12
CDK5R1-201ENST00000313401 PDRG1Q9NUG6 133 aa22.05■■□□□ 1.12
CDK5R1-201ENST00000313401 LARP1BQ659C4 914 aaKnown RBP22.04■■□□□ 1.12
CDK5R1-201ENST00000313401 RHPN1Q8TCX5 695 aa22.04■■□□□ 1.12
CDK5R1-201ENST00000313401 EFCAB6Q5THR3 1501 aa22.04■■□□□ 1.12
CDK5R1-201ENST00000313401 PA2G4Q9UQ80 394 aaKnown RBP22.04■■□□□ 1.12
CDK5R1-201ENST00000313401 ZNF592Q92610 1267 aa22.04■■□□□ 1.12
CDK5R1-201ENST00000313401 PRKCSHP14314 528 aaPredicted RBP22.03■■□□□ 1.12
CDK5R1-201ENST00000313401 CLCN1P35523 988 aa22.03■■□□□ 1.12
CDK5R1-201ENST00000313401 PIP4K2AP48426 406 aaPredicted RBP22.03■■□□□ 1.12
CDK5R1-201ENST00000313401 METP08581 1390 aa22.02■■□□□ 1.12
CDK5R1-201ENST00000313401 CAMK4Q16566 473 aa22.02■■□□□ 1.12
CDK5R1-201ENST00000313401 PHF8Q9UPP1 1060 aa22.02■■□□□ 1.12
CDK5R1-201ENST00000313401 TNRQ92752 1358 aa22.02■■□□□ 1.12
CDK5R1-201ENST00000313401 HTATSF1O43719 755 aaKnown RBP22.02■■□□□ 1.12
CDK5R1-201ENST00000313401 TOMM22Q9NS69 142 aa22.02■■□□□ 1.12
CDK5R1-201ENST00000313401 USP25Q9UHP3 1055 aa22.02■■□□□ 1.12
CDK5R1-201ENST00000313401 GOLGA6L6A8MZA4 724 aa22.02■■□□□ 1.12
CDK5R1-201ENST00000313401 ATP8B2P98198 1209 aa22.02■■□□□ 1.12
CDK5R1-201ENST00000313401 EDC4Q6P2E9 1401 aaKnown RBP22.01■■□□□ 1.11
CDK5R1-201ENST00000313401 BECN2A8MW95 431 aa22.01■■□□□ 1.11
CDK5R1-201ENST00000313401 DDX11Q96FC9 970 aa22.01■■□□□ 1.11
CDK5R1-201ENST00000313401 CCDC85AQ96PX6 553 aaPredicted RBP22.01■■□□□ 1.11
CDK5R1-201ENST00000313401 MAP3K2Q9Y2U5 619 aa22.01■■□□□ 1.11
CDK5R1-201ENST00000313401 RNF17Q9BXT8 1623 aaKnown RBP22.01■■□□□ 1.11
CDK5R1-201ENST00000313401 NECAB1Q8N987 351 aa22■■□□□ 1.11
CDK5R1-201ENST00000313401 GOLGA6L19H0YKK7 550 aa22■■□□□ 1.11
CDK5R1-201ENST00000313401 GLRX3O76003 335 aaKnown RBP22■■□□□ 1.11
CDK5R1-201ENST00000313401 ZMYM3Q14202 1370 aa22■■□□□ 1.11
CDK5R1-201ENST00000313401 ZNF830Q96NB3 372 aaPredicted RBP21.99■■□□□ 1.11
CDK5R1-201ENST00000313401 CHMLP26374 656 aa21.99■■□□□ 1.11
CDK5R1-201ENST00000313401 NCBP3Q53F19 620 aaKnown RBP21.99■■□□□ 1.11
CDK5R1-201ENST00000313401 SHROOM2Q13796 1616 aa21.99■■□□□ 1.11
CDK5R1-201ENST00000313401 BLOC1S2Q6QNY1 142 aa21.98■■□□□ 1.11
CDK5R1-201ENST00000313401 RAB11FIP3O75154 756 aa21.98■■□□□ 1.11
CDK5R1-201ENST00000313401 PROSER2Q86WR7 435 aaPredicted RBP21.98■■□□□ 1.11
CDK5R1-201ENST00000313401 TFIP11Q9UBB9 837 aaKnown RBP21.98■■□□□ 1.11
CDK5R1-201ENST00000313401 CWF19L2Q2TBE0 894 aaKnown RBP21.97■■□□□ 1.11
CDK5R1-201ENST00000313401 RBSNQ9H1K0 784 aa21.97■■□□□ 1.11
CDK5R1-201ENST00000313401 SLC39A6Q13433 755 aa21.97■■□□□ 1.11
CDK5R1-201ENST00000313401 PALD1Q9ULE6 856 aa21.97■■□□□ 1.11
CDK5R1-201ENST00000313401 CNPY2Q9Y2B0 182 aa21.97■■□□□ 1.11
CDK5R1-201ENST00000313401 PSMA5P28066 241 aa21.97■■□□□ 1.11
CDK5R1-201ENST00000313401 WASHC4Q2M389 1173 aa21.97■■□□□ 1.11
CDK5R1-201ENST00000313401 LTKP29376 864 aa21.96■■□□□ 1.11
CDK5R1-201ENST00000313401 HCLS1P14317 486 aaPredicted RBP21.96■■□□□ 1.11
CDK5R1-201ENST00000313401 PRR36Q9H6K5 1346 aa21.96■■□□□ 1.11
CDK5R1-201ENST00000313401 RTL1A6NKG5 1358 aa21.96■■□□□ 1.11
CDK5R1-201ENST00000313401 APPP05067 770 aa21.96■■□□□ 1.11
CDK5R1-201ENST00000313401 SASS6Q6UVJ0 657 aa21.96■■□□□ 1.11
CDK5R1-201ENST00000313401 LIMCH1Q9UPQ0 1083 aa21.96■■□□□ 1.11
CDK5R1-201ENST00000313401 UQCRHLA0A096LP55 91 aa21.95■■□□□ 1.1
CDK5R1-201ENST00000313401 UQCRHP07919 91 aa21.95■■□□□ 1.1
CDK5R1-201ENST00000313401 TRIM5Q9C035 493 aa21.95■■□□□ 1.1
CDK5R1-201ENST00000313401 LGR6Q9HBX8 967 aa21.95■■□□□ 1.1
CDK5R1-201ENST00000313401 KCNA6P17658 529 aa21.95■■□□□ 1.1
CDK5R1-201ENST00000313401 ERC1Q8IUD2 1116 aa21.95■■□□□ 1.1
CDK5R1-201ENST00000313401 NBPF7P0C2Y1 421 aaPredicted RBP21.94■■□□□ 1.1
CDK5R1-201ENST00000313401 ZNF853P0CG23 659 aa21.94■■□□□ 1.1
CDK5R1-201ENST00000313401 USP48Q86UV5 1035 aa21.94■■□□□ 1.1
CDK5R1-201ENST00000313401 PPP6R1Q9UPN7 881 aa21.94■■□□□ 1.1
CDK5R1-201ENST00000313401 MYD88Q99836 296 aa21.94■■□□□ 1.1
CDK5R1-201ENST00000313401 FLT4P35916 1363 aa21.94■■□□□ 1.1
CDK5R1-201ENST00000313401 DBF4Q9UBU7 674 aaPredicted RBP21.94■■□□□ 1.1
CDK5R1-201ENST00000313401 LAMC1P11047 1609 aa21.93■■□□□ 1.1
CDK5R1-201ENST00000313401 ATP5J2-PTCD1G3V325 749 aa21.93■■□□□ 1.1
CDK5R1-201ENST00000313401 PTCD1O75127 700 aaKnown RBP21.93■■□□□ 1.1
CDK5R1-201ENST00000313401 GIMAP6Q6P9H5 292 aa21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms