RNA–Protein interactions for RNA: ENST00000313352.11

PUF60-201, Transcript of poly(U) binding splicing factor 60, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PUF60, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-201ENST00000313352 SLC4A9Q96Q91 983 aa22.8■■□□□ 1.24
PUF60-201ENST00000313352 SLC52A2Q9HAB3 445 aa22.8■■□□□ 1.24
PUF60-201ENST00000313352 SLC39A6Q13433 755 aa22.79■■□□□ 1.24
PUF60-201ENST00000313352 CCDC146Q8IYE0 955 aa22.79■■□□□ 1.24
PUF60-201ENST00000313352 LOC102724428A0A0B4J2F2 783 aa22.78■■□□□ 1.24
PUF60-201ENST00000313352 SIK1P57059 783 aa22.78■■□□□ 1.24
PUF60-201ENST00000313352 AKT1S1Q96B36 256 aa22.78■■□□□ 1.24
PUF60-201ENST00000313352 ADAMTS8Q9UP79 889 aa22.78■■□□□ 1.24
PUF60-201ENST00000313352 ITPK1Q13572 414 aa22.78■■□□□ 1.24
PUF60-201ENST00000313352 MCM10Q7L590 875 aa22.78■■□□□ 1.24
PUF60-201ENST00000313352 SMARCC1Q92922 1105 aaPredicted RBP22.78■■□□□ 1.24
PUF60-201ENST00000313352 STK32BQ9NY57 414 aa22.78■■□□□ 1.24
PUF60-201ENST00000313352 MRC1P22897 1456 aa22.77■■□□□ 1.24
PUF60-201ENST00000313352 ANP32CO43423 234 aa22.77■■□□□ 1.24
PUF60-201ENST00000313352 SMIM5Q71RC9 77 aa22.77■■□□□ 1.24
PUF60-201ENST00000313352 PTCD1O75127 700 aaKnown RBP22.76■■□□□ 1.23
PUF60-201ENST00000313352 RBM42Q9BTD8 480 aaKnown RBP22.76■■□□□ 1.23
PUF60-201ENST00000313352 C5P01031 1676 aa22.76■■□□□ 1.23
PUF60-201ENST00000313352 TAF1LQ8IZX4 1826 aa22.75■■□□□ 1.23
PUF60-201ENST00000313352 AMIGO3Q86WK7 504 aa22.75■■□□□ 1.23
PUF60-201ENST00000313352 DLG5Q8TDM6 1919 aa22.75■■□□□ 1.23
PUF60-201ENST00000313352 LINC00116Q8NCU8 138 aa22.75■■□□□ 1.23
PUF60-201ENST00000313352 ATP6V1AP38606 617 aa22.74■■□□□ 1.23
PUF60-201ENST00000313352 TUBGCP6Q96RT7 1819 aa22.74■■□□□ 1.23
PUF60-201ENST00000313352 CEMIPQ8WUJ3 1361 aa22.74■■□□□ 1.23
PUF60-201ENST00000313352 WDR43Q15061 677 aaKnown RBP eCLIP22.73■■□□□ 1.23
PUF60-201ENST00000313352 THUMPD2Q9BTF0 503 aaKnown RBP22.73■■□□□ 1.23
PUF60-201ENST00000313352 RRP7AQ9Y3A4 280 aaKnown RBP22.72■■□□□ 1.23
PUF60-201ENST00000313352 SIPA1L3O60292 1781 aaPredicted RBP22.72■■□□□ 1.23
PUF60-201ENST00000313352 CASZ1Q86V15 1759 aa22.72■■□□□ 1.23
PUF60-201ENST00000313352 NFE2L2Q16236 605 aa22.71■■□□□ 1.23
PUF60-201ENST00000313352 KCNQ3O43525 872 aa22.71■■□□□ 1.23
PUF60-201ENST00000313352 PNPLA7Q6ZV29 1317 aa22.7■■□□□ 1.22
PUF60-201ENST00000313352 MAPK8IP3Q9UPT6 1336 aa22.7■■□□□ 1.22
PUF60-201ENST00000313352 C4BP0C0L5 1744 aa22.7■■□□□ 1.22
PUF60-201ENST00000313352 SENP3-EIF4A1A0A087X0R7 540 aa22.7■■□□□ 1.22
PUF60-201ENST00000313352 TEFQ10587 303 aa22.7■■□□□ 1.22
PUF60-201ENST00000313352 TFCP2L1Q9NZI6 479 aa22.7■■□□□ 1.22
PUF60-201ENST00000313352 ZBTB7AO95365 584 aa22.69■■□□□ 1.22
PUF60-201ENST00000313352 NEFMP07197 916 aa22.68■■□□□ 1.22
PUF60-201ENST00000313352 RTF1Q92541 710 aaKnown RBP22.68■■□□□ 1.22
PUF60-201ENST00000313352 KCPQ6ZWJ8 1503 aa22.68■■□□□ 1.22
PUF60-201ENST00000313352 NEUROD2Q15784 382 aa22.68■■□□□ 1.22
PUF60-201ENST00000313352 MRS2Q9HD23 443 aa22.67■■□□□ 1.22
PUF60-201ENST00000313352 MIS18AQ9NYP9 233 aa22.67■■□□□ 1.22
PUF60-201ENST00000313352 TMPOP42166 694 aaKnown RBP22.66■■□□□ 1.22
PUF60-201ENST00000313352 PNNQ9H307 717 aaKnown RBP22.66■■□□□ 1.22
PUF60-201ENST00000313352 TJP1Q07157 1748 aa22.66■■□□□ 1.22
PUF60-201ENST00000313352 RIPK4P57078 832 aa22.66■■□□□ 1.22
PUF60-201ENST00000313352 COL23A1Q86Y22 540 aaPredicted RBP22.66■■□□□ 1.22
PUF60-201ENST00000313352 RUNDC1Q96C34 613 aa22.66■■□□□ 1.22
PUF60-201ENST00000313352 ATF5Q9Y2D1 282 aaPredicted RBP22.66■■□□□ 1.22
PUF60-201ENST00000313352 COL5A3P25940 1745 aaPredicted RBP22.64■■□□□ 1.22
PUF60-201ENST00000313352 BTBD11A6QL63 1104 aa22.64■■□□□ 1.22
PUF60-201ENST00000313352 PHF14O94880 888 aa22.64■■□□□ 1.22
PUF60-201ENST00000313352 ZNF790Q6PG37 636 aa22.64■■□□□ 1.22
PUF60-201ENST00000313352 DNAJC10Q8IXB1 793 aa22.64■■□□□ 1.22
PUF60-201ENST00000313352 PNISRQ8TF01 805 aaKnown RBP22.64■■□□□ 1.22
PUF60-201ENST00000313352 ZNF496Q96IT1 587 aaPredicted RBP22.64■■□□□ 1.22
PUF60-201ENST00000313352 UBR2Q8IWV8 1755 aa22.64■■□□□ 1.21
PUF60-201ENST00000313352 HTATSF1O43719 755 aaKnown RBP22.64■■□□□ 1.21
PUF60-201ENST00000313352 AK7Q96M32 723 aa22.63■■□□□ 1.21
PUF60-201ENST00000313352 ZNF831Q5JPB2 1677 aa22.63■■□□□ 1.21
PUF60-201ENST00000313352 UBR3Q6ZT12 1888 aa22.63■■□□□ 1.21
PUF60-201ENST00000313352 MYH14Q7Z406 1995 aaKnown RBP22.63■■□□□ 1.21
PUF60-201ENST00000313352 QSER1Q2KHR3 1735 aa22.62■■□□□ 1.21
PUF60-201ENST00000313352 GNPATO15228 680 aa22.61■■□□□ 1.21
PUF60-201ENST00000313352 TRIM35Q9UPQ4 493 aa22.61■■□□□ 1.21
PUF60-201ENST00000313352 PRAMEF22A3QJZ6 481 aa22.6■■□□□ 1.21
PUF60-201ENST00000313352 APAF1O14727 1248 aa22.6■■□□□ 1.21
PUF60-201ENST00000313352 MSH5O43196 834 aa22.6■■□□□ 1.21
PUF60-201ENST00000313352 TTC5Q8N0Z6 440 aa22.6■■□□□ 1.21
PUF60-201ENST00000313352 LRP5O75197 1615 aa22.6■■□□□ 1.21
PUF60-201ENST00000313352 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.59■■□□□ 1.21
PUF60-201ENST00000313352 PTGER2P43116 358 aa22.59■■□□□ 1.21
PUF60-201ENST00000313352 CRKLP46109 303 aaKnown RBP22.59■■□□□ 1.21
PUF60-201ENST00000313352 TAF7Q15545 349 aaPredicted RBP22.59■■□□□ 1.21
PUF60-201ENST00000313352 SPON1Q9HCB6 807 aa22.58■■□□□ 1.21
PUF60-201ENST00000313352 MSL1Q68DK7 614 aa22.57■■□□□ 1.2
PUF60-201ENST00000313352 INTS5Q6P9B9 1019 aaKnown RBP22.57■■□□□ 1.2
PUF60-201ENST00000313352 HEG1Q9ULI3 1381 aa22.57■■□□□ 1.2
PUF60-201ENST00000313352 CICQ96RK0 1608 aaPredicted RBP22.57■■□□□ 1.2
PUF60-201ENST00000313352 CYP19A1P11511 503 aaPredicted RBP22.57■■□□□ 1.2
PUF60-201ENST00000313352 CNTNAP4Q9C0A0 1308 aa22.56■■□□□ 1.2
PUF60-201ENST00000313352 MTFR1LQ9H019 292 aa22.56■■□□□ 1.2
PUF60-201ENST00000313352 SGIP1Q9BQI5 828 aa22.55■■□□□ 1.2
PUF60-201ENST00000313352 RC3H1Q5TC82 1133 aaKnown RBP22.54■■□□□ 1.2
PUF60-201ENST00000313352 FAM9BQ8IZU0 186 aa22.54■■□□□ 1.2
PUF60-201ENST00000313352 VSIG10Q8N0Z9 540 aa22.54■■□□□ 1.2
PUF60-201ENST00000313352 FMNL2Q96PY5 1086 aa22.54■■□□□ 1.2
PUF60-201ENST00000313352 ZBTB1Q9Y2K1 713 aa22.54■■□□□ 1.2
PUF60-201ENST00000313352 USP16Q9Y5T5 823 aa22.54■■□□□ 1.2
PUF60-201ENST00000313352 SSFA2P28290 1259 aa22.53■■□□□ 1.2
PUF60-201ENST00000313352 RTCBQ9Y3I0 505 aaKnown RBP22.53■■□□□ 1.2
PUF60-201ENST00000313352 KDM3BQ7LBC6 1761 aa22.53■■□□□ 1.2
PUF60-201ENST00000313352 RPS6KA4O75676 772 aa22.52■■□□□ 1.2
PUF60-201ENST00000313352 ARHGEF1Q92888 912 aaKnown RBP22.52■■□□□ 1.2
PUF60-201ENST00000313352 PIP4K2AP48426 406 aaPredicted RBP22.52■■□□□ 1.2
PUF60-201ENST00000313352 CCDC87Q9NVE4 849 aa22.51■■□□□ 1.19
PUF60-201ENST00000313352 A1BGP04217 495 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms