RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 RBM19Q9Y4C8 960 aaKnown RBP21.18■□□□□ 0.98
CLCF1-201ENST00000312438 ROBO1Q9Y6N7 1651 aa21.18■□□□□ 0.98
CLCF1-201ENST00000312438 DCAF5Q96JK2 942 aa21.18■□□□□ 0.98
CLCF1-201ENST00000312438 HDAC1Q13547 482 aaPredicted RBP21.17■□□□□ 0.98
CLCF1-201ENST00000312438 STRN4Q9NRL3 753 aa21.17■□□□□ 0.98
CLCF1-201ENST00000312438 CYP27B1O15528 508 aa21.16■□□□□ 0.98
CLCF1-201ENST00000312438 KCNQ3O43525 872 aa21.16■□□□□ 0.98
CLCF1-201ENST00000312438 HDGFL1Q5TGJ6 251 aa21.16■□□□□ 0.98
CLCF1-201ENST00000312438 LARP1Q6PKG0 1096 aaKnown RBP21.16■□□□□ 0.98
CLCF1-201ENST00000312438 SLC52A2Q9HAB3 445 aa21.16■□□□□ 0.98
CLCF1-201ENST00000312438 ZCRB1Q8TBF4 217 aaKnown RBP21.15■□□□□ 0.98
CLCF1-201ENST00000312438 IL2RBP14784 551 aa21.15■□□□□ 0.98
CLCF1-201ENST00000312438 G2E3Q7L622 706 aa21.15■□□□□ 0.98
CLCF1-201ENST00000312438 BTG4Q9NY30 223 aa21.14■□□□□ 0.97
CLCF1-201ENST00000312438 RGS12O14924 1447 aa21.13■□□□□ 0.97
CLCF1-201ENST00000312438 NECTIN2Q92692 538 aa21.13■□□□□ 0.97
CLCF1-201ENST00000312438 ABCA3Q99758 1704 aa21.13■□□□□ 0.97
CLCF1-201ENST00000312438 FLIIQ13045 1269 aa21.13■□□□□ 0.97
CLCF1-201ENST00000312438 SKAP1Q86WV1 359 aa21.13■□□□□ 0.97
CLCF1-201ENST00000312438 KDM6AO15550 1401 aaPredicted RBP21.12■□□□□ 0.97
CLCF1-201ENST00000312438 EIF2S2P20042 333 aaKnown RBP21.12■□□□□ 0.97
CLCF1-201ENST00000312438 NFATC2IPQ8NCF5 419 aa21.12■□□□□ 0.97
CLCF1-201ENST00000312438 PCDH11XQ9BZA7 1347 aa21.12■□□□□ 0.97
CLCF1-201ENST00000312438 PCDH11YQ9BZA8 1340 aa21.12■□□□□ 0.97
CLCF1-201ENST00000312438 GIGYF1O75420 1035 aaPredicted RBP21.11■□□□□ 0.97
CLCF1-201ENST00000312438 HEG1Q9ULI3 1381 aa21.11■□□□□ 0.97
CLCF1-201ENST00000312438 ADAMTS7Q9UKP4 1686 aa21.11■□□□□ 0.97
CLCF1-201ENST00000312438 ZNF790Q6PG37 636 aa21.11■□□□□ 0.97
CLCF1-201ENST00000312438 CCT4P50991 539 aaKnown RBP21.1■□□□□ 0.97
CLCF1-201ENST00000312438 PIP4K2BP78356 416 aa21.1■□□□□ 0.97
CLCF1-201ENST00000312438 FKBP5Q13451 457 aaPredicted RBP21.1■□□□□ 0.97
CLCF1-201ENST00000312438 CABP4P57796 275 aa21.08■□□□□ 0.97
CLCF1-201ENST00000312438 NKX1-1Q15270 411 aaPredicted RBP21.08■□□□□ 0.97
CLCF1-201ENST00000312438 RGS3P49796 1198 aa21.08■□□□□ 0.96
CLCF1-201ENST00000312438 KDM3BQ7LBC6 1761 aa21.07■□□□□ 0.96
CLCF1-201ENST00000312438 COL22A1Q8NFW1 1626 aaPredicted RBP21.07■□□□□ 0.96
CLCF1-201ENST00000312438 F6X3S4 739 aa21.07■□□□□ 0.96
CLCF1-201ENST00000312438 SLC4A10Q6U841 1118 aa21.07■□□□□ 0.96
CLCF1-201ENST00000312438 DBF4Q9UBU7 674 aaPredicted RBP21.07■□□□□ 0.96
CLCF1-201ENST00000312438 SMC5Q8IY18 1101 aa21.06■□□□□ 0.96
CLCF1-201ENST00000312438 PDZRN3Q9UPQ7 1066 aa21.06■□□□□ 0.96
CLCF1-201ENST00000312438 PDE4AP27815 886 aa21.06■□□□□ 0.96
CLCF1-201ENST00000312438 SLC39A6Q13433 755 aa21.06■□□□□ 0.96
CLCF1-201ENST00000312438 CHPF2Q9P2E5 772 aa21.06■□□□□ 0.96
CLCF1-201ENST00000312438 USP35Q9P2H5 1018 aa21.06■□□□□ 0.96
CLCF1-201ENST00000312438 PKD1L3Q7Z443 1732 aa21.05■□□□□ 0.96
CLCF1-201ENST00000312438 ERVV-2B6SEH9 535 aa21.05■□□□□ 0.96
CLCF1-201ENST00000312438 UBAP1LF5GYI3 381 aa21.05■□□□□ 0.96
CLCF1-201ENST00000312438 PHAXQ9H814 394 aaKnown RBP21.05■□□□□ 0.96
CLCF1-201ENST00000312438 TTC5Q8N0Z6 440 aa21.04■□□□□ 0.96
CLCF1-201ENST00000312438 DDX54Q8TDD1 881 aaKnown RBP21.04■□□□□ 0.96
CLCF1-201ENST00000312438 C1orf115Q9H7X2 142 aa21.04■□□□□ 0.96
CLCF1-201ENST00000312438 RPAP2Q8IXW5 612 aaPredicted RBP21.03■□□□□ 0.96
CLCF1-201ENST00000312438 BACH2Q9BYV9 841 aa21.03■□□□□ 0.96
CLCF1-201ENST00000312438 MRC1P22897 1456 aa21.03■□□□□ 0.96
CLCF1-201ENST00000312438 COL14A1Q05707 1796 aaKnown RBP21.02■□□□□ 0.96
CLCF1-201ENST00000312438 GCC1Q96CN9 775 aa21.02■□□□□ 0.96
CLCF1-201ENST00000312438 PARP4Q9UKK3 1724 aaKnown RBP21.02■□□□□ 0.95
CLCF1-201ENST00000312438 SIRT2Q8IXJ6 389 aa21.01■□□□□ 0.95
CLCF1-201ENST00000312438 PRAMEF22A3QJZ6 481 aa21.01■□□□□ 0.95
CLCF1-201ENST00000312438 ADAMTS2O95450 1211 aa21.01■□□□□ 0.95
CLCF1-201ENST00000312438 ZNF496Q96IT1 587 aaPredicted RBP21.01■□□□□ 0.95
CLCF1-201ENST00000312438 FMNL2Q96PY5 1086 aa21.01■□□□□ 0.95
CLCF1-201ENST00000312438 MEIS3Q99687 375 aa21.01■□□□□ 0.95
CLCF1-201ENST00000312438 HYPKQ9NX55 129 aa21.01■□□□□ 0.95
CLCF1-201ENST00000312438 COL16A1Q07092 1604 aaPredicted RBP21.01■□□□□ 0.95
CLCF1-201ENST00000312438 SCN11AQ9UI33 1791 aa21■□□□□ 0.95
CLCF1-201ENST00000312438 SNRPA1P09661 255 aaKnown RBP21■□□□□ 0.95
CLCF1-201ENST00000312438 SIPA1L3O60292 1781 aaPredicted RBP21■□□□□ 0.95
CLCF1-201ENST00000312438 PHLPP1O60346 1717 aa21■□□□□ 0.95
CLCF1-201ENST00000312438 ANKRD44Q8N8A2 993 aa20.99■□□□□ 0.95
CLCF1-201ENST00000312438 GNAI3P08754 354 aa20.99■□□□□ 0.95
CLCF1-201ENST00000312438 AEBP2Q6ZN18 517 aaPredicted RBP20.99■□□□□ 0.95
CLCF1-201ENST00000312438 DDX21Q9NR30 783 aaKnown RBP eCLIP20.99■□□□□ 0.95
CLCF1-201ENST00000312438 FAM161AQ3B820 660 aa20.98■□□□□ 0.95
CLCF1-201ENST00000312438 NUTM2BA6NNL0 878 aaPredicted RBP20.97■□□□□ 0.95
CLCF1-201ENST00000312438 NUTM2EB1AL46 878 aaPredicted RBP20.97■□□□□ 0.95
CLCF1-201ENST00000312438 NUCB1Q02818 461 aa20.97■□□□□ 0.95
CLCF1-201ENST00000312438 NUTM2AQ8IVF1 878 aaPredicted RBP20.97■□□□□ 0.95
CLCF1-201ENST00000312438 PI4KAP2A4QPH2 592 aa20.97■□□□□ 0.95
CLCF1-201ENST00000312438 ANXA1P04083 346 aa20.97■□□□□ 0.95
CLCF1-201ENST00000312438 CEP85Q6P2H3 762 aa20.97■□□□□ 0.95
CLCF1-201ENST00000312438 PI4KAP1Q8N8J0 262 aa20.97■□□□□ 0.95
CLCF1-201ENST00000312438 DNAAF4Q8WXU2 420 aa20.97■□□□□ 0.95
CLCF1-201ENST00000312438 PXDNLA1KZ92 1463 aa20.96■□□□□ 0.95
CLCF1-201ENST00000312438 GNAI2P04899 355 aa20.96■□□□□ 0.95
CLCF1-201ENST00000312438 SRCIN1Q9C0H9 1055 aa20.96■□□□□ 0.95
CLCF1-201ENST00000312438 EXOC5O00471 708 aa20.95■□□□□ 0.94
CLCF1-201ENST00000312438 PDIA6Q15084 440 aa20.95■□□□□ 0.94
CLCF1-201ENST00000312438 CDCA7Q9BWT1 371 aaPredicted RBP20.95■□□□□ 0.94
CLCF1-201ENST00000312438 THRAP3Q9Y2W1 955 aaKnown RBP20.95■□□□□ 0.94
CLCF1-201ENST00000312438 DISP2A7MBM2 1401 aa20.95■□□□□ 0.94
CLCF1-201ENST00000312438 CACNA1FO60840 1977 aa20.95■□□□□ 0.94
CLCF1-201ENST00000312438 PROSER3Q2NL68 480 aa20.94■□□□□ 0.94
CLCF1-201ENST00000312438 KSR2Q6VAB6 950 aa20.94■□□□□ 0.94
CLCF1-201ENST00000312438 CHD1LQ86WJ1 897 aa20.94■□□□□ 0.94
CLCF1-201ENST00000312438 DCTPP1Q9H773 170 aa20.94■□□□□ 0.94
CLCF1-201ENST00000312438 USP16Q9Y5T5 823 aa20.94■□□□□ 0.94
CLCF1-201ENST00000312438 VIRMAQ69YN4 1812 aaKnown RBP20.94■□□□□ 0.94
CLCF1-201ENST00000312438 DDX58O95786 925 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 490.2 ms