RNA–Protein interactions for RNA: ENST00000312413.10

CLCN6-201, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 2 BASIC

Gene CLCN6, Length 5,631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-201ENST00000312413 KIF1BPQ96EK5 621 aa15.93■□□□□ 0.14
CLCN6-201ENST00000312413 PRIMPOLQ96LW4 560 aa15.93■□□□□ 0.14
CLCN6-201ENST00000312413 U3KPZ7 1027 aaPredicted RBP15.93■□□□□ 0.14
CLCN6-201ENST00000312413 TATP17735 454 aaPredicted RBP15.93■□□□□ 0.14
CLCN6-201ENST00000312413 KLHL10Q6JEL2 608 aa15.93■□□□□ 0.14
CLCN6-201ENST00000312413 FCHSD2O94868 740 aa15.93■□□□□ 0.14
CLCN6-201ENST00000312413 SMC1AQ14683 1233 aaKnown RBP15.93■□□□□ 0.14
CLCN6-201ENST00000312413 BMS1Q14692 1282 aaKnown RBP15.93■□□□□ 0.14
CLCN6-201ENST00000312413 RAI14Q9P0K7 980 aa15.93■□□□□ 0.14
CLCN6-201ENST00000312413 MPHOSPH8Q99549 860 aa15.93■□□□□ 0.14
CLCN6-201ENST00000312413 ZNF530Q6P9A1 599 aaPredicted RBP15.92■□□□□ 0.14
CLCN6-201ENST00000312413 CKAP2LQ8IYA6 745 aa15.92■□□□□ 0.14
CLCN6-201ENST00000312413 ADCY5O95622 1261 aa15.92■□□□□ 0.14
CLCN6-201ENST00000312413 ZNF692Q9BU19 519 aaPredicted RBP15.92■□□□□ 0.14
CLCN6-201ENST00000312413 ERBINQ96RT1 1412 aa15.92■□□□□ 0.14
CLCN6-201ENST00000312413 DESP17661 470 aa15.92■□□□□ 0.14
CLCN6-201ENST00000312413 PPP1R12BO60237 982 aaPredicted RBP15.91■□□□□ 0.14
CLCN6-201ENST00000312413 USO1O60763 962 aaKnown RBP15.91■□□□□ 0.14
CLCN6-201ENST00000312413 SSR1P43307 286 aaKnown RBP15.91■□□□□ 0.14
CLCN6-201ENST00000312413 TICAM2Q86XR7 235 aa15.91■□□□□ 0.14
CLCN6-201ENST00000312413 CACNA2D4Q7Z3S7 1137 aa15.91■□□□□ 0.14
CLCN6-201ENST00000312413 RAB11FIP3O75154 756 aa15.91■□□□□ 0.14
CLCN6-201ENST00000312413 CABP1Q9NZU7 370 aa15.91■□□□□ 0.14
CLCN6-201ENST00000312413 KIAA1107Q9UPP5 1409 aa15.91■□□□□ 0.14
CLCN6-201ENST00000312413 MYL6BP14649 208 aa15.91■□□□□ 0.14
CLCN6-201ENST00000312413 VPS36Q86VN1 386 aa15.91■□□□□ 0.14
CLCN6-201ENST00000312413 LIMCH1Q9UPQ0 1083 aa15.91■□□□□ 0.14
CLCN6-201ENST00000312413 GOLGA6L9A6NEM1 432 aa15.9■□□□□ 0.14
CLCN6-201ENST00000312413 TMPOP42166 694 aaKnown RBP15.9■□□□□ 0.14
CLCN6-201ENST00000312413 CASKIN1Q8WXD9 1431 aa15.9■□□□□ 0.14
CLCN6-201ENST00000312413 CCDC175P0C221 793 aa15.9■□□□□ 0.14
CLCN6-201ENST00000312413 C8orf76Q96K31 380 aa15.9■□□□□ 0.14
CLCN6-201ENST00000312413 GCOM1H8Y6P7 765 aaPredicted RBP15.9■□□□□ 0.14
CLCN6-201ENST00000312413 MYZAPP0CAP1 466 aa15.9■□□□□ 0.14
CLCN6-201ENST00000312413 UVSSAQ2YD98 709 aa15.9■□□□□ 0.14
CLCN6-201ENST00000312413 IFT140Q96RY7 1462 aa15.9■□□□□ 0.14
CLCN6-201ENST00000312413 YEATS4O95619 227 aa15.9■□□□□ 0.14
CLCN6-201ENST00000312413 NFE2L2Q16236 605 aa15.9■□□□□ 0.14
CLCN6-201ENST00000312413 IPO4Q8TEX9 1081 aaKnown RBP15.9■□□□□ 0.14
CLCN6-201ENST00000312413 GRIN2BQ13224 1484 aa15.89■□□□□ 0.13
CLCN6-201ENST00000312413 SPDYE4A6NLX3 237 aa15.89■□□□□ 0.13
CLCN6-201ENST00000312413 POTEJP0CG39 1038 aa15.89■□□□□ 0.13
CLCN6-201ENST00000312413 CABP4P57796 275 aa15.89■□□□□ 0.13
CLCN6-201ENST00000312413 SNW1Q13573 536 aaKnown RBP15.89■□□□□ 0.13
CLCN6-201ENST00000312413 SPECC1Q5M775 1068 aa15.89■□□□□ 0.13
CLCN6-201ENST00000312413 ZMYND15Q9H091 742 aa15.89■□□□□ 0.13
CLCN6-201ENST00000312413 LMAN1P49257 510 aa15.89■□□□□ 0.13
CLCN6-201ENST00000312413 PAXBP1Q9Y5B6 917 aa15.89■□□□□ 0.13
CLCN6-201ENST00000312413 NUP88Q99567 741 aaPredicted RBP15.89■□□□□ 0.13
CLCN6-201ENST00000312413 CCDC178Q5BJE1 867 aa15.89■□□□□ 0.13
CLCN6-201ENST00000312413 C20orf194Q5TEA3 1177 aa15.89■□□□□ 0.13
CLCN6-201ENST00000312413 AIDAQ96BJ3 306 aa15.89■□□□□ 0.13
CLCN6-201ENST00000312413 CDK19Q9BWU1 502 aa15.89■□□□□ 0.13
CLCN6-201ENST00000312413 CC2D2AQ9P2K1 1620 aa15.89■□□□□ 0.13
CLCN6-201ENST00000312413 RARSP54136 660 aaKnown RBP15.88■□□□□ 0.13
CLCN6-201ENST00000312413 KLHL40Q2TBA0 621 aa15.88■□□□□ 0.13
CLCN6-201ENST00000312413 CTR9Q6PD62 1173 aa15.88■□□□□ 0.13
CLCN6-201ENST00000312413 SKAP1Q86WV1 359 aa15.88■□□□□ 0.13
CLCN6-201ENST00000312413 GPATCH11Q8N954 259 aa15.88■□□□□ 0.13
CLCN6-201ENST00000312413 UBE2Q2Q8WVN8 375 aa15.88■□□□□ 0.13
CLCN6-201ENST00000312413 GSTTP1A0A1W2PQM5 241 aa15.88■□□□□ 0.13
CLCN6-201ENST00000312413 IDH1O75874 414 aaKnown RBP15.88■□□□□ 0.13
CLCN6-201ENST00000312413 TIGD1Q96MW7 591 aa15.88■□□□□ 0.13
CLCN6-201ENST00000312413 SMARCA5O60264 1052 aaPredicted RBP15.88■□□□□ 0.13
CLCN6-201ENST00000312413 TMC6Q7Z403 805 aa15.88■□□□□ 0.13
CLCN6-201ENST00000312413 NAA15Q9BXJ9 866 aaKnown RBP15.88■□□□□ 0.13
CLCN6-201ENST00000312413 BCCIPQ9P287 314 aaKnown RBP eCLIP15.88■□□□□ 0.13
CLCN6-201ENST00000312413 STX1AQ16623 288 aa15.88■□□□□ 0.13
CLCN6-201ENST00000312413 CYB5RLQ6IPT4 315 aa15.88■□□□□ 0.13
CLCN6-201ENST00000312413 PHAXQ9H814 394 aaKnown RBP15.88■□□□□ 0.13
CLCN6-201ENST00000312413 BAG4O95429 457 aaKnown RBP15.88■□□□□ 0.13
CLCN6-201ENST00000312413 HMGB1P09429 215 aaKnown RBP15.88■□□□□ 0.13
CLCN6-201ENST00000312413 CPLX3Q8WVH0 158 aa15.88■□□□□ 0.13
CLCN6-201ENST00000312413 PIBF1Q8WXW3 757 aa15.88■□□□□ 0.13
CLCN6-201ENST00000312413 TSG101Q99816 390 aa15.88■□□□□ 0.13
CLCN6-201ENST00000312413 CCDC196A0A1B0GTZ2 297 aa15.87■□□□□ 0.13
CLCN6-201ENST00000312413 CAVIN2O95810 425 aa15.87■□□□□ 0.13
CLCN6-201ENST00000312413 FSIP1Q8NA03 581 aa15.87■□□□□ 0.13
CLCN6-201ENST00000312413 GOPCQ9HD26 462 aa15.87■□□□□ 0.13
CLCN6-201ENST00000312413 ZNF165P49910 485 aa15.87■□□□□ 0.13
CLCN6-201ENST00000312413 ALDH1L2Q3SY69 923 aa15.87■□□□□ 0.13
CLCN6-201ENST00000312413 CEP135Q66GS9 1140 aa15.87■□□□□ 0.13
CLCN6-201ENST00000312413 CNNM3Q8NE01 707 aa15.87■□□□□ 0.13
CLCN6-201ENST00000312413 ZNF76P36508 570 aa15.87■□□□□ 0.13
CLCN6-201ENST00000312413 LRP2BPQ9P2M1 347 aa15.87■□□□□ 0.13
CLCN6-201ENST00000312413 CFTRP13569 1480 aa15.86■□□□□ 0.13
CLCN6-201ENST00000312413 FGFR1OPO95684 399 aaKnown RBP15.86■□□□□ 0.13
CLCN6-201ENST00000312413 CLCN1P35523 988 aa15.86■□□□□ 0.13
CLCN6-201ENST00000312413 KRT222Q8N1A0 295 aa15.86■□□□□ 0.13
CLCN6-201ENST00000312413 SSH1Q8WYL5 1049 aa15.86■□□□□ 0.13
CLCN6-201ENST00000312413 ESCO1Q5FWF5 840 aa15.86■□□□□ 0.13
CLCN6-201ENST00000312413 GDPD2Q9HCC8 539 aa15.86■□□□□ 0.13
CLCN6-201ENST00000312413 HLTFQ14527 1009 aaKnown RBP eCLIP15.86■□□□□ 0.13
CLCN6-201ENST00000312413 DNA2P51530 1060 aa15.86■□□□□ 0.13
CLCN6-201ENST00000312413 TMX1Q9H3N1 280 aa15.86■□□□□ 0.13
CLCN6-201ENST00000312413 POLA1P09884 1462 aaPredicted RBP15.85■□□□□ 0.13
CLCN6-201ENST00000312413 ALS2CR12Q96Q35 445 aa15.85■□□□□ 0.13
CLCN6-201ENST00000312413 GUCY1B3Q02153 619 aa15.85■□□□□ 0.13
CLCN6-201ENST00000312413 TDRD12Q587J7 1177 aaKnown RBP15.85■□□□□ 0.13
CLCN6-201ENST00000312413 SPG7Q9UQ90 795 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms