RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 BCL11BQ9C0K0 894 aaPredicted RBP21.86■■□□□ 1.09
SPSB4-201ENST00000310546 APBB1O00213 710 aa21.86■■□□□ 1.09
SPSB4-201ENST00000310546 ALDH1L2Q3SY69 923 aa21.86■■□□□ 1.09
SPSB4-201ENST00000310546 ELL2O00472 640 aaPredicted RBP21.85■■□□□ 1.09
SPSB4-201ENST00000310546 GADD45BO75293 160 aaPredicted RBP21.85■■□□□ 1.09
SPSB4-201ENST00000310546 HDGFL2Q7Z4V5 671 aaPredicted RBP21.85■■□□□ 1.09
SPSB4-201ENST00000310546 PHF14O94880 888 aa21.85■■□□□ 1.09
SPSB4-201ENST00000310546 NME9Q86XW9 330 aa21.85■■□□□ 1.09
SPSB4-201ENST00000310546 NSD2O96028 1365 aa21.85■■□□□ 1.09
SPSB4-201ENST00000310546 NEK4P51957 841 aa21.84■■□□□ 1.09
SPSB4-201ENST00000310546 CASC1Q6TDU7 716 aa21.84■■□□□ 1.09
SPSB4-201ENST00000310546 OTUD7AQ8TE49 926 aaPredicted RBP21.84■■□□□ 1.09
SPSB4-201ENST00000310546 SPTLC3Q9NUV7 552 aa21.84■■□□□ 1.09
SPSB4-201ENST00000310546 TMX3Q96JJ7 454 aa21.83■■□□□ 1.09
SPSB4-201ENST00000310546 HCLS1P14317 486 aaPredicted RBP21.83■■□□□ 1.09
SPSB4-201ENST00000310546 DIAPH3Q9NSV4 1193 aa21.83■■□□□ 1.09
SPSB4-201ENST00000310546 CFAP44Q96MT7 982 aa21.83■■□□□ 1.08
SPSB4-201ENST00000310546 FAM184AQ8NB25 1140 aa21.82■■□□□ 1.08
SPSB4-201ENST00000310546 SDSP20132 328 aa21.82■■□□□ 1.08
SPSB4-201ENST00000310546 IL16Q14005 1332 aa21.81■■□□□ 1.08
SPSB4-201ENST00000310546 BRD1O95696 1058 aa21.81■■□□□ 1.08
SPSB4-201ENST00000310546 SMARCA5O60264 1052 aaPredicted RBP21.8■■□□□ 1.08
SPSB4-201ENST00000310546 TAF3Q5VWG9 929 aa21.8■■□□□ 1.08
SPSB4-201ENST00000310546 KCNA6P17658 529 aa21.8■■□□□ 1.08
SPSB4-201ENST00000310546 PRR36Q9H6K5 1346 aa21.8■■□□□ 1.08
SPSB4-201ENST00000310546 REC8O95072 547 aa21.79■■□□□ 1.08
SPSB4-201ENST00000310546 UVSSAQ2YD98 709 aa21.79■■□□□ 1.08
SPSB4-201ENST00000310546 NUTM2GQ5VZR2 741 aa21.79■■□□□ 1.08
SPSB4-201ENST00000310546 SLIT1O75093 1534 aa21.79■■□□□ 1.08
SPSB4-201ENST00000310546 ANKRD7Q92527 254 aa21.79■■□□□ 1.08
SPSB4-201ENST00000310546 CDK11BP21127 795 aaKnown RBP21.79■■□□□ 1.08
SPSB4-201ENST00000310546 USP48Q86UV5 1035 aa21.79■■□□□ 1.08
SPSB4-201ENST00000310546 ARHGAP23Q9P227 1491 aa21.79■■□□□ 1.08
SPSB4-201ENST00000310546 ADGRB2O60241 1585 aa21.78■■□□□ 1.08
SPSB4-201ENST00000310546 RRS1Q15050 365 aaKnown RBP21.78■■□□□ 1.08
SPSB4-201ENST00000310546 PYCARDQ9ULZ3 195 aa21.78■■□□□ 1.08
SPSB4-201ENST00000310546 MED14O60244 1454 aa21.78■■□□□ 1.08
SPSB4-201ENST00000310546 SPC24Q8NBT2 197 aa21.78■■□□□ 1.08
SPSB4-201ENST00000310546 ADAMTS13Q76LX8 1427 aa21.77■■□□□ 1.08
SPSB4-201ENST00000310546 TSPYL6Q8N831 410 aa21.77■■□□□ 1.08
SPSB4-201ENST00000310546 CCDC61Q9Y6R9 512 aa21.77■■□□□ 1.08
SPSB4-201ENST00000310546 KIAA1524Q8TCG1 905 aa21.76■■□□□ 1.07
SPSB4-201ENST00000310546 FEZ1Q99689 392 aa21.76■■□□□ 1.07
SPSB4-201ENST00000310546 MAPK8IP2Q13387 824 aaPredicted RBP21.76■■□□□ 1.07
SPSB4-201ENST00000310546 MRPL50Q8N5N7 158 aaKnown RBP21.76■■□□□ 1.07
SPSB4-201ENST00000310546 EMILIN1Q9Y6C2 1016 aa21.76■■□□□ 1.07
SPSB4-201ENST00000310546 THUMPD2Q9BTF0 503 aaKnown RBP21.75■■□□□ 1.07
SPSB4-201ENST00000310546 OGFRQ9NZT2 677 aa21.75■■□□□ 1.07
SPSB4-201ENST00000310546 LMTK3Q96Q04 1460 aa21.75■■□□□ 1.07
SPSB4-201ENST00000310546 ANKRD26Q9UPS8 1709 aa21.75■■□□□ 1.07
SPSB4-201ENST00000310546 KDM4AO75164 1064 aa21.74■■□□□ 1.07
SPSB4-201ENST00000310546 C14orf37Q86TY3 774 aa21.74■■□□□ 1.07
SPSB4-201ENST00000310546 DCTPP1Q9H773 170 aa21.74■■□□□ 1.07
SPSB4-201ENST00000310546 PTPRUQ92729 1446 aa21.74■■□□□ 1.07
SPSB4-201ENST00000310546 ERC2O15083 957 aa21.74■■□□□ 1.07
SPSB4-201ENST00000310546 KNDC1Q76NI1 1749 aa21.73■■□□□ 1.07
SPSB4-201ENST00000310546 VAMP4O75379 141 aa21.73■■□□□ 1.07
SPSB4-201ENST00000310546 KCNF1Q9H3M0 494 aa21.73■■□□□ 1.07
SPSB4-201ENST00000310546 HMOX1P09601 288 aa21.73■■□□□ 1.07
SPSB4-201ENST00000310546 TECPR2O15040 1411 aa21.73■■□□□ 1.07
SPSB4-201ENST00000310546 KIF20BQ96Q89 1820 aa21.73■■□□□ 1.07
SPSB4-201ENST00000310546 PLCD3Q8N3E9 789 aa21.73■■□□□ 1.07
SPSB4-201ENST00000310546 CTIFO43310 598 aaKnown RBP21.72■■□□□ 1.07
SPSB4-201ENST00000310546 CCDC183Q5T5S1 534 aa21.72■■□□□ 1.07
SPSB4-201ENST00000310546 FAM135BQ49AJ0 1406 aa21.72■■□□□ 1.07
SPSB4-201ENST00000310546 ARHGAP45Q92619 1136 aa21.72■■□□□ 1.07
SPSB4-201ENST00000310546 CPS1P31327 1500 aa21.71■■□□□ 1.07
SPSB4-201ENST00000310546 KCNJ4P48050 445 aa21.71■■□□□ 1.07
SPSB4-201ENST00000310546 HSPA2P54652 639 aa21.71■■□□□ 1.07
SPSB4-201ENST00000310546 NCBP1Q09161 790 aaKnown RBP21.71■■□□□ 1.07
SPSB4-201ENST00000310546 PLEKHG1Q9ULL1 1385 aa21.71■■□□□ 1.07
SPSB4-201ENST00000310546 ATP7BP35670 1465 aa21.71■■□□□ 1.07
SPSB4-201ENST00000310546 BRPF1P55201 1214 aaPredicted RBP21.7■■□□□ 1.06
SPSB4-201ENST00000310546 ACEP12821 1306 aa21.7■■□□□ 1.06
SPSB4-201ENST00000310546 ANKLE2Q86XL3 938 aa21.69■■□□□ 1.06
SPSB4-201ENST00000310546 ZNF428Q96B54 188 aa21.69■■□□□ 1.06
SPSB4-201ENST00000310546 ABCC4O15439 1325 aa21.69■■□□□ 1.06
SPSB4-201ENST00000310546 NAA30Q147X3 362 aaPredicted RBP21.69■■□□□ 1.06
SPSB4-201ENST00000310546 SIRT1Q96EB6 747 aa21.69■■□□□ 1.06
SPSB4-201ENST00000310546 AP5Z1O43299 807 aa21.68■■□□□ 1.06
SPSB4-201ENST00000310546 MX1P20591 662 aa21.68■■□□□ 1.06
SPSB4-201ENST00000310546 NGDNQ8NEJ9 315 aaKnown RBP21.68■■□□□ 1.06
SPSB4-201ENST00000310546 GIMAP6Q6P9H5 292 aa21.68■■□□□ 1.06
SPSB4-201ENST00000310546 CTNNA3Q9UI47 895 aa21.68■■□□□ 1.06
SPSB4-201ENST00000310546 IPO4Q8TEX9 1081 aaKnown RBP21.67■■□□□ 1.06
SPSB4-201ENST00000310546 C16orf45Q96MC5 204 aaPredicted RBP21.67■■□□□ 1.06
SPSB4-201ENST00000310546 CNPY2Q9Y2B0 182 aa21.67■■□□□ 1.06
SPSB4-201ENST00000310546 CPSF1Q10570 1443 aaKnown RBP21.67■■□□□ 1.06
SPSB4-201ENST00000310546 MCM2P49736 904 aa21.67■■□□□ 1.06
SPSB4-201ENST00000310546 UPF3BQ9BZI7 483 aaKnown RBP21.67■■□□□ 1.06
SPSB4-201ENST00000310546 POLKQ9UBT6 870 aa21.67■■□□□ 1.06
SPSB4-201ENST00000310546 TBX22Q9Y458 520 aa21.67■■□□□ 1.06
SPSB4-201ENST00000310546 DIAPH1O60610 1272 aaKnown RBP21.66■■□□□ 1.06
SPSB4-201ENST00000310546 CUL4AQ13619 759 aa21.66■■□□□ 1.06
SPSB4-201ENST00000310546 PIK3R4Q99570 1358 aa21.66■■□□□ 1.06
SPSB4-201ENST00000310546 IRX5P78411 483 aaPredicted RBP21.66■■□□□ 1.06
SPSB4-201ENST00000310546 GABPB1Q06547 395 aaPredicted RBP21.66■■□□□ 1.06
SPSB4-201ENST00000310546 PALD1Q9ULE6 856 aa21.66■■□□□ 1.06
SPSB4-201ENST00000310546 COL3A1P02461 1466 aaPredicted RBP21.66■■□□□ 1.06
SPSB4-201ENST00000310546 SLFN14P0C7P3 912 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms