RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 IL17REQ8NFR9 667 aa23.66■■□□□ 1.38
CCS-201ENST00000310190 ANO8Q9HCE9 1232 aaPredicted RBP23.66■■□□□ 1.38
CCS-201ENST00000310190 ASAP1Q9ULH1 1129 aa23.66■■□□□ 1.38
CCS-201ENST00000310190 SRCAPQ6ZRS2 3230 aa23.66■■□□□ 1.38
CCS-201ENST00000310190 SLC15A2Q16348 729 aa23.65■■□□□ 1.38
CCS-201ENST00000310190 AKT1S1Q96B36 256 aa23.65■■□□□ 1.38
CCS-201ENST00000310190 DLG5Q8TDM6 1919 aa23.65■■□□□ 1.38
CCS-201ENST00000310190 C5P01031 1676 aa23.64■■□□□ 1.38
CCS-201ENST00000310190 NEFMP07197 916 aa23.64■■□□□ 1.37
CCS-201ENST00000310190 CCNL1Q9UK58 526 aaPredicted RBP23.64■■□□□ 1.37
CCS-201ENST00000310190 LOC102724428A0A0B4J2F2 783 aa23.63■■□□□ 1.37
CCS-201ENST00000310190 SIK1P57059 783 aa23.63■■□□□ 1.37
CCS-201ENST00000310190 NFE2L2Q16236 605 aa23.62■■□□□ 1.37
CCS-201ENST00000310190 STK32BQ9NY57 414 aa23.62■■□□□ 1.37
CCS-201ENST00000310190 CASZ1Q86V15 1759 aa23.62■■□□□ 1.37
CCS-201ENST00000310190 UBR2Q8IWV8 1755 aa23.62■■□□□ 1.37
CCS-201ENST00000310190 R3HDM1Q15032 1099 aaKnown RBP23.61■■□□□ 1.37
CCS-201ENST00000310190 WDR43Q15061 677 aaKnown RBP eCLIP23.61■■□□□ 1.37
CCS-201ENST00000310190 ADAMTS8Q9UP79 889 aa23.61■■□□□ 1.37
CCS-201ENST00000310190 COL5A3P25940 1745 aaPredicted RBP23.59■■□□□ 1.37
CCS-201ENST00000310190 MAPK8IP3Q9UPT6 1336 aa23.59■■□□□ 1.37
CCS-201ENST00000310190 RUNDC1Q96C34 613 aa23.58■■□□□ 1.37
CCS-201ENST00000310190 SLC4A9Q96Q91 983 aa23.58■■□□□ 1.37
CCS-201ENST00000310190 C4BP0C0L5 1744 aa23.58■■□□□ 1.37
CCS-201ENST00000310190 LRP5O75197 1615 aa23.58■■□□□ 1.36
CCS-201ENST00000310190 TEFQ10587 303 aa23.57■■□□□ 1.36
CCS-201ENST00000310190 ZNF827Q17R98 1081 aa23.57■■□□□ 1.36
CCS-201ENST00000310190 VSIG10Q8N0Z9 540 aa23.57■■□□□ 1.36
CCS-201ENST00000310190 PNISRQ8TF01 805 aaKnown RBP23.57■■□□□ 1.36
CCS-201ENST00000310190 RTF1Q92541 710 aaKnown RBP23.57■■□□□ 1.36
CCS-201ENST00000310190 KCPQ6ZWJ8 1503 aa23.57■■□□□ 1.36
CCS-201ENST00000310190 TUBGCP6Q96RT7 1819 aa23.56■■□□□ 1.36
CCS-201ENST00000310190 RC3H1Q5TC82 1133 aaKnown RBP23.56■■□□□ 1.36
CCS-201ENST00000310190 PSDA5PKW4 1024 aaPredicted RBP23.55■■□□□ 1.36
CCS-201ENST00000310190 TMPOP42166 694 aaKnown RBP23.55■■□□□ 1.36
CCS-201ENST00000310190 UBR3Q6ZT12 1888 aa23.54■■□□□ 1.36
CCS-201ENST00000310190 COL24A1Q17RW2 1714 aa23.54■■□□□ 1.36
CCS-201ENST00000310190 ITPK1Q13572 414 aa23.54■■□□□ 1.36
CCS-201ENST00000310190 CCDC184Q52MB2 194 aa23.54■■□□□ 1.36
CCS-201ENST00000310190 NCBP3Q53F19 620 aaKnown RBP23.54■■□□□ 1.36
CCS-201ENST00000310190 ATP6V1AP38606 617 aa23.53■■□□□ 1.36
CCS-201ENST00000310190 KCNQ4P56696 695 aa23.53■■□□□ 1.36
CCS-201ENST00000310190 SLC16A10Q8TF71 515 aa23.53■■□□□ 1.36
CCS-201ENST00000310190 TJP1Q07157 1748 aa23.53■■□□□ 1.36
CCS-201ENST00000310190 LMOD3Q0VAK6 560 aa23.52■■□□□ 1.36
CCS-201ENST00000310190 ZNF790Q6PG37 636 aa23.52■■□□□ 1.36
CCS-201ENST00000310190 LINC00116Q8NCU8 138 aa23.52■■□□□ 1.36
CCS-201ENST00000310190 FLAD1Q8NFF5 587 aa23.52■■□□□ 1.36
CCS-201ENST00000310190 CNTNAP4Q9C0A0 1308 aa23.52■■□□□ 1.36
CCS-201ENST00000310190 MCM10Q7L590 875 aa23.51■■□□□ 1.35
CCS-201ENST00000310190 BABAM1Q9NWV8 329 aa23.51■■□□□ 1.35
CCS-201ENST00000310190 MYH14Q7Z406 1995 aaKnown RBP23.51■■□□□ 1.35
CCS-201ENST00000310190 TAF7Q15545 349 aaPredicted RBP23.5■■□□□ 1.35
CCS-201ENST00000310190 PNPLA7Q6ZV29 1317 aa23.5■■□□□ 1.35
CCS-201ENST00000310190 RIPK4P57078 832 aa23.49■■□□□ 1.35
CCS-201ENST00000310190 RBM42Q9BTD8 480 aaKnown RBP23.49■■□□□ 1.35
CCS-201ENST00000310190 MRS2Q9HD23 443 aa23.49■■□□□ 1.35
CCS-201ENST00000310190 SSFA2P28290 1259 aa23.48■■□□□ 1.35
CCS-201ENST00000310190 SLC39A6Q13433 755 aa23.48■■□□□ 1.35
CCS-201ENST00000310190 TFCP2L1Q9NZI6 479 aa23.48■■□□□ 1.35
CCS-201ENST00000310190 KDM3BQ7LBC6 1761 aa23.47■■□□□ 1.35
CCS-201ENST00000310190 BTBD11A6QL63 1104 aa23.47■■□□□ 1.35
CCS-201ENST00000310190 PTCD1O75127 700 aaKnown RBP23.47■■□□□ 1.35
CCS-201ENST00000310190 TEX13AQ9BXU3 409 aaPredicted RBP23.47■■□□□ 1.35
CCS-201ENST00000310190 DCTN1Q14203 1278 aa23.46■■□□□ 1.35
CCS-201ENST00000310190 TTC5Q8N0Z6 440 aa23.46■■□□□ 1.35
CCS-201ENST00000310190 HEG1Q9ULI3 1381 aa23.46■■□□□ 1.35
CCS-201ENST00000310190 ADRA2BP18089 450 aa23.45■■□□□ 1.34
CCS-201ENST00000310190 CCDC146Q8IYE0 955 aa23.45■■□□□ 1.34
CCS-201ENST00000310190 ZNF496Q96IT1 587 aaPredicted RBP23.45■■□□□ 1.34
CCS-201ENST00000310190 MTFR1LQ9H019 292 aa23.45■■□□□ 1.34
CCS-201ENST00000310190 TRIM35Q9UPQ4 493 aa23.45■■□□□ 1.34
CCS-201ENST00000310190 AK7Q96M32 723 aa23.44■■□□□ 1.34
CCS-201ENST00000310190 FMNL2Q96PY5 1086 aa23.44■■□□□ 1.34
CCS-201ENST00000310190 PDGFDQ9GZP0 370 aaPredicted RBP23.44■■□□□ 1.34
CCS-201ENST00000310190 RPS6KA4O75676 772 aa23.43■■□□□ 1.34
CCS-201ENST00000310190 CYP19A1P11511 503 aaPredicted RBP23.43■■□□□ 1.34
CCS-201ENST00000310190 SGIP1Q9BQI5 828 aa23.43■■□□□ 1.34
CCS-201ENST00000310190 SPON1Q9HCB6 807 aa23.43■■□□□ 1.34
CCS-201ENST00000310190 CCER2I3L3R5 266 aa23.42■■□□□ 1.34
CCS-201ENST00000310190 COL23A1Q86Y22 540 aaPredicted RBP23.42■■□□□ 1.34
CCS-201ENST00000310190 CCDC27Q2M243 656 aa23.41■■□□□ 1.34
CCS-201ENST00000310190 APAF1O14727 1248 aa23.4■■□□□ 1.34
CCS-201ENST00000310190 CRKLP46109 303 aaKnown RBP23.4■■□□□ 1.34
CCS-201ENST00000310190 INTS5Q6P9B9 1019 aaKnown RBP23.4■■□□□ 1.34
CCS-201ENST00000310190 AMIGO3Q86WK7 504 aa23.4■■□□□ 1.34
CCS-201ENST00000310190 DNAJC10Q8IXB1 793 aa23.4■■□□□ 1.34
CCS-201ENST00000310190 KCNQ3O43525 872 aa23.39■■□□□ 1.33
CCS-201ENST00000310190 PTGER2P43116 358 aa23.39■■□□□ 1.33
CCS-201ENST00000310190 NGEFQ8N5V2 710 aa23.39■■□□□ 1.33
CCS-201ENST00000310190 RTCBQ9Y3I0 505 aaKnown RBP23.39■■□□□ 1.33
CCS-201ENST00000310190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.38■■□□□ 1.33
CCS-201ENST00000310190 GNPATO15228 680 aa23.38■■□□□ 1.33
CCS-201ENST00000310190 STARD3NLO95772 234 aa23.38■■□□□ 1.33
CCS-201ENST00000310190 CCDC87Q9NVE4 849 aa23.38■■□□□ 1.33
CCS-201ENST00000310190 CHL1O00533 1208 aa23.37■■□□□ 1.33
CCS-201ENST00000310190 SNRPA1P09661 255 aaKnown RBP23.37■■□□□ 1.33
CCS-201ENST00000310190 THUMPD2Q9BTF0 503 aaKnown RBP23.37■■□□□ 1.33
CCS-201ENST00000310190 EIF4A1P60842 406 aaKnown RBP23.36■■□□□ 1.33
CCS-201ENST00000310190 RRP7AQ9Y3A4 280 aaKnown RBP23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms