RNA–Protein interactions for RNA: ENST00000310112.7

SNCB-201, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-201ENST00000310112 MEGF6O75095 1541 aa29.89■■■□□ 2.38
SNCB-201ENST00000310112 PARP4Q9UKK3 1724 aaKnown RBP29.89■■■□□ 2.38
SNCB-201ENST00000310112 COL22A1Q8NFW1 1626 aaPredicted RBP29.89■■■□□ 2.38
SNCB-201ENST00000310112 SIPA1L3O60292 1781 aaPredicted RBP29.89■■■□□ 2.37
SNCB-201ENST00000310112 ZBTB7BO15156 539 aaPredicted RBP29.89■■■□□ 2.37
SNCB-201ENST00000310112 BTBD11A6QL63 1104 aa29.88■■■□□ 2.37
SNCB-201ENST00000310112 EIF4A1P60842 406 aaKnown RBP29.88■■■□□ 2.37
SNCB-201ENST00000310112 PHKG2P15735 406 aa29.87■■■□□ 2.37
SNCB-201ENST00000310112 SCN11AQ9UI33 1791 aa29.87■■■□□ 2.37
SNCB-201ENST00000310112 RGS12O14924 1447 aa29.86■■■□□ 2.37
SNCB-201ENST00000310112 CARD10Q9BWT7 1032 aa29.86■■■□□ 2.37
SNCB-201ENST00000310112 TOM1L2Q6ZVM7 507 aa29.83■■■□□ 2.37
SNCB-201ENST00000310112 DCAF5Q96JK2 942 aa29.83■■■□□ 2.37
SNCB-201ENST00000310112 MRC1P22897 1456 aa29.82■■■□□ 2.36
SNCB-201ENST00000310112 COL14A1Q05707 1796 aaKnown RBP29.81■■■□□ 2.36
SNCB-201ENST00000310112 HDGFL1Q5TGJ6 251 aa29.81■■■□□ 2.36
SNCB-201ENST00000310112 CCT4P50991 539 aaKnown RBP29.8■■■□□ 2.36
SNCB-201ENST00000310112 HEG1Q9ULI3 1381 aa29.8■■■□□ 2.36
SNCB-201ENST00000310112 SLC52A2Q9HAB3 445 aa29.79■■■□□ 2.36
SNCB-201ENST00000310112 KDM6AO15550 1401 aaPredicted RBP29.79■■■□□ 2.36
SNCB-201ENST00000310112 EVA1CP58658 441 aa29.78■■■□□ 2.36
SNCB-201ENST00000310112 PXDNLA1KZ92 1463 aa29.78■■■□□ 2.36
SNCB-201ENST00000310112 PCDH11XQ9BZA7 1347 aa29.78■■■□□ 2.36
SNCB-201ENST00000310112 PCDH11YQ9BZA8 1340 aa29.78■■■□□ 2.36
SNCB-201ENST00000310112 FLIIQ13045 1269 aa29.77■■■□□ 2.36
SNCB-201ENST00000310112 SMC5Q8IY18 1101 aa29.77■■■□□ 2.36
SNCB-201ENST00000310112 TOM1O60784 492 aa29.76■■■□□ 2.35
SNCB-201ENST00000310112 IL2RBP14784 551 aa29.76■■■□□ 2.35
SNCB-201ENST00000310112 ZCRB1Q8TBF4 217 aaKnown RBP29.75■■■□□ 2.35
SNCB-201ENST00000310112 CYP27B1O15528 508 aa29.74■■■□□ 2.35
SNCB-201ENST00000310112 PDE4AP27815 886 aa29.74■■■□□ 2.35
SNCB-201ENST00000310112 G2E3Q7L622 706 aa29.74■■■□□ 2.35
SNCB-201ENST00000310112 N4BP2Q86UW6 1770 aaPredicted RBP29.73■■■□□ 2.35
SNCB-201ENST00000310112 BACH2Q9BYV9 841 aa29.73■■■□□ 2.35
SNCB-201ENST00000310112 PHLPP1O60346 1717 aa29.72■■■□□ 2.35
SNCB-201ENST00000310112 GCC1Q96CN9 775 aa29.72■■■□□ 2.35
SNCB-201ENST00000310112 PDZRN3Q9UPQ7 1066 aa29.72■■■□□ 2.35
SNCB-201ENST00000310112 GIGYF1O75420 1035 aaPredicted RBP29.71■■■□□ 2.35
SNCB-201ENST00000310112 FKBP5Q13451 457 aaPredicted RBP29.71■■■□□ 2.35
SNCB-201ENST00000310112 COL16A1Q07092 1604 aaPredicted RBP29.71■■■□□ 2.35
SNCB-201ENST00000310112 KCNQ3O43525 872 aa29.7■■■□□ 2.35
SNCB-201ENST00000310112 NKX1-1Q15270 411 aaPredicted RBP29.7■■■□□ 2.35
SNCB-201ENST00000310112 RGS3P49796 1198 aa29.69■■■□□ 2.34
SNCB-201ENST00000310112 ZNF790Q6PG37 636 aa29.69■■■□□ 2.34
SNCB-201ENST00000310112 LARP1Q6PKG0 1096 aaKnown RBP29.69■■■□□ 2.34
SNCB-201ENST00000310112 RPAP2Q8IXW5 612 aaPredicted RBP29.69■■■□□ 2.34
SNCB-201ENST00000310112 DBF4Q9UBU7 674 aaPredicted RBP29.69■■■□□ 2.34
SNCB-201ENST00000310112 STRN4Q9NRL3 753 aa29.68■■■□□ 2.34
SNCB-201ENST00000310112 ERVV-2B6SEH9 535 aa29.67■■■□□ 2.34
SNCB-201ENST00000310112 FAM161AQ3B820 660 aa29.67■■■□□ 2.34
SNCB-201ENST00000310112 EIF2S2P20042 333 aaKnown RBP29.65■■■□□ 2.34
SNCB-201ENST00000310112 BTG4Q9NY30 223 aa29.65■■■□□ 2.34
SNCB-201ENST00000310112 GNAI3P08754 354 aa29.64■■■□□ 2.34
SNCB-201ENST00000310112 CABP4P57796 275 aa29.64■■■□□ 2.34
SNCB-201ENST00000310112 SKAP1Q86WV1 359 aa29.64■■■□□ 2.34
SNCB-201ENST00000310112 NFATC2IPQ8NCF5 419 aa29.64■■■□□ 2.34
SNCB-201ENST00000310112 NECTIN2Q92692 538 aa29.64■■■□□ 2.34
SNCB-201ENST00000310112 ANKRD44Q8N8A2 993 aa29.64■■■□□ 2.33
SNCB-201ENST00000310112 SLC4A10Q6U841 1118 aa29.63■■■□□ 2.33
SNCB-201ENST00000310112 TTC5Q8N0Z6 440 aa29.63■■■□□ 2.33
SNCB-201ENST00000310112 HYPKQ9NX55 129 aa29.63■■■□□ 2.33
SNCB-201ENST00000310112 CHPF2Q9P2E5 772 aa29.63■■■□□ 2.33
SNCB-201ENST00000310112 NUCB1Q02818 461 aa29.62■■■□□ 2.33
SNCB-201ENST00000310112 PLCH1Q4KWH8 1693 aa29.62■■■□□ 2.33
SNCB-201ENST00000310112 SHANK3Q9BYB0 1731 aa29.61■■■□□ 2.33
SNCB-201ENST00000310112 F6X3S4 739 aa29.61■■■□□ 2.33
SNCB-201ENST00000310112 FMNL2Q96PY5 1086 aa29.6■■■□□ 2.33
SNCB-201ENST00000310112 ATP10DQ9P241 1426 aa29.59■■■□□ 2.33
SNCB-201ENST00000310112 MEIS3Q99687 375 aa29.59■■■□□ 2.33
SNCB-201ENST00000310112 C1orf115Q9H7X2 142 aa29.59■■■□□ 2.33
SNCB-201ENST00000310112 DDX21Q9NR30 783 aaKnown RBP eCLIP29.59■■■□□ 2.33
SNCB-201ENST00000310112 HMMRO75330 724 aa29.58■■■□□ 2.33
SNCB-201ENST00000310112 SNRPA1P09661 255 aaKnown RBP29.58■■■□□ 2.33
SNCB-201ENST00000310112 SIRT2Q8IXJ6 389 aa29.58■■■□□ 2.33
SNCB-201ENST00000310112 DISP2A7MBM2 1401 aa29.58■■■□□ 2.33
SNCB-201ENST00000310112 PHAXQ9H814 394 aaKnown RBP29.57■■■□□ 2.32
SNCB-201ENST00000310112 GNAI2P04899 355 aa29.56■■■□□ 2.32
SNCB-201ENST00000310112 CEP85Q6P2H3 762 aa29.56■■■□□ 2.32
SNCB-201ENST00000310112 CDCA7Q9BWT1 371 aaPredicted RBP29.56■■■□□ 2.32
SNCB-201ENST00000310112 SLC39A6Q13433 755 aa29.55■■■□□ 2.32
SNCB-201ENST00000310112 CHD1LQ86WJ1 897 aa29.55■■■□□ 2.32
SNCB-201ENST00000310112 DNAAF4Q8WXU2 420 aa29.55■■■□□ 2.32
SNCB-201ENST00000310112 DCTPP1Q9H773 170 aa29.55■■■□□ 2.32
SNCB-201ENST00000310112 DDX58O95786 925 aaKnown RBP29.54■■■□□ 2.32
SNCB-201ENST00000310112 C8orf34Q49A92 452 aa29.54■■■□□ 2.32
SNCB-201ENST00000310112 SRCIN1Q9C0H9 1055 aa29.54■■■□□ 2.32
SNCB-201ENST00000310112 IBTKQ9P2D0 1353 aaPredicted RBP29.54■■■□□ 2.32
SNCB-201ENST00000310112 ZNF496Q96IT1 587 aaPredicted RBP29.53■■■□□ 2.32
SNCB-201ENST00000310112 ERBB4Q15303 1308 aa29.53■■■□□ 2.32
SNCB-201ENST00000310112 THRAP3Q9Y2W1 955 aaKnown RBP29.52■■■□□ 2.32
SNCB-201ENST00000310112 C5P01031 1676 aa29.52■■■□□ 2.32
SNCB-201ENST00000310112 PAPPAQ13219 1627 aa29.52■■■□□ 2.32
SNCB-201ENST00000310112 HDAC5Q9UQL6 1122 aa29.52■■■□□ 2.32
SNCB-201ENST00000310112 LAMB4A4D0S4 1761 aa29.51■■■□□ 2.32
SNCB-201ENST00000310112 ALDH1L1O75891 902 aa29.51■■■□□ 2.31
SNCB-201ENST00000310112 ANP32AP39687 249 aaKnown RBP29.51■■■□□ 2.31
SNCB-201ENST00000310112 KSR2Q6VAB6 950 aa29.51■■■□□ 2.31
SNCB-201ENST00000310112 NWD2Q9ULI1 1742 aa29.51■■■□□ 2.31
SNCB-201ENST00000310112 WNK3Q9BYP7 1800 aa29.5■■■□□ 2.31
SNCB-201ENST00000310112 UBR2Q8IWV8 1755 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms