RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 GNAI3P08754 354 aa14.24□□□□□ -0.13
PTPN2-201ENST00000309660 UBTFL1P0CB47 393 aaPredicted RBP14.24□□□□□ -0.13
PTPN2-201ENST00000309660 IP6K1Q92551 441 aa14.24□□□□□ -0.13
PTPN2-201ENST00000309660 PIK3C2AO00443 1686 aa14.24□□□□□ -0.13
PTPN2-201ENST00000309660 HTATSF1O43719 755 aaKnown RBP14.23□□□□□ -0.13
PTPN2-201ENST00000309660 TRAK2O60296 914 aa14.23□□□□□ -0.13
PTPN2-201ENST00000309660 SNX21Q969T3 373 aa14.23□□□□□ -0.13
PTPN2-201ENST00000309660 ANKARQ7Z5J8 1434 aa14.22□□□□□ -0.13
PTPN2-201ENST00000309660 LRRCC1Q9C099 1032 aa14.22□□□□□ -0.13
PTPN2-201ENST00000309660 PDE1AP54750 535 aa14.22□□□□□ -0.13
PTPN2-201ENST00000309660 ZC3H6P61129 1189 aaKnown RBP14.22□□□□□ -0.13
PTPN2-201ENST00000309660 TNPO1Q92973 898 aaKnown RBP14.22□□□□□ -0.13
PTPN2-201ENST00000309660 CHPF2Q9P2E5 772 aa14.22□□□□□ -0.13
PTPN2-201ENST00000309660 NALCNQ8IZF0 1738 aa14.21□□□□□ -0.13
PTPN2-201ENST00000309660 NOL8Q76FK4 1167 aaKnown RBP14.21□□□□□ -0.13
PTPN2-201ENST00000309660 BTBD11A6QL63 1104 aa14.21□□□□□ -0.14
PTPN2-201ENST00000309660 GCP02774 474 aa14.21□□□□□ -0.14
PTPN2-201ENST00000309660 C1orf141Q5JVX7 400 aa14.21□□□□□ -0.14
PTPN2-201ENST00000309660 PROSER2Q86WR7 435 aaPredicted RBP14.2□□□□□ -0.14
PTPN2-201ENST00000309660 RGPD1P0DJD0 1748 aa14.2□□□□□ -0.14
PTPN2-201ENST00000309660 SURF6O75683 361 aaKnown RBP14.2□□□□□ -0.14
PTPN2-201ENST00000309660 MAP4K4O95819 1239 aaPredicted RBP14.2□□□□□ -0.14
PTPN2-201ENST00000309660 USP26Q9BXU7 913 aa14.2□□□□□ -0.14
PTPN2-201ENST00000309660 PI4KAP2A4QPH2 592 aa14.2□□□□□ -0.14
PTPN2-201ENST00000309660 NUTM1Q86Y26 1132 aa14.2□□□□□ -0.14
PTPN2-201ENST00000309660 PI4KAP1Q8N8J0 262 aa14.2□□□□□ -0.14
PTPN2-201ENST00000309660 KCNH5Q8NCM2 988 aa14.2□□□□□ -0.14
PTPN2-201ENST00000309660 USP44Q9H0E7 712 aa14.2□□□□□ -0.14
PTPN2-201ENST00000309660 SRCIN1Q9C0H9 1055 aa14.19□□□□□ -0.14
PTPN2-201ENST00000309660 MX1P20591 662 aa14.19□□□□□ -0.14
PTPN2-201ENST00000309660 REC8O95072 547 aa14.18□□□□□ -0.14
PTPN2-201ENST00000309660 SSFA2P28290 1259 aa14.18□□□□□ -0.14
PTPN2-201ENST00000309660 OS9Q13438 667 aaPredicted RBP14.18□□□□□ -0.14
PTPN2-201ENST00000309660 RABEP1Q15276 862 aa14.18□□□□□ -0.14
PTPN2-201ENST00000309660 PLEKHO1Q53GL0 409 aaPredicted RBP14.18□□□□□ -0.14
PTPN2-201ENST00000309660 DDX17Q92841 729 aaKnown RBP14.18□□□□□ -0.14
PTPN2-201ENST00000309660 GBP4Q96PP9 640 aa14.18□□□□□ -0.14
PTPN2-201ENST00000309660 ANO2Q9NQ90 1003 aa14.18□□□□□ -0.14
PTPN2-201ENST00000309660 FMN2Q9NZ56 1722 aa14.18□□□□□ -0.14
PTPN2-201ENST00000309660 ERC2O15083 957 aa14.18□□□□□ -0.14
PTPN2-201ENST00000309660 SRGAP3O43295 1099 aa14.18□□□□□ -0.14
PTPN2-201ENST00000309660 ATP8B2P98198 1209 aa14.18□□□□□ -0.14
PTPN2-201ENST00000309660 ANKRD24Q8TF21 1146 aa14.18□□□□□ -0.14
PTPN2-201ENST00000309660 GOLGA6L3A6NEY3 463 aa14.17□□□□□ -0.14
PTPN2-201ENST00000309660 DDX11L8A8MPP1 907 aa14.17□□□□□ -0.14
PTPN2-201ENST00000309660 NBPF7P0C2Y1 421 aaPredicted RBP14.17□□□□□ -0.14
PTPN2-201ENST00000309660 PPP1R42Q7Z4L9 355 aa14.17□□□□□ -0.14
PTPN2-201ENST00000309660 EIF4A1P60842 406 aaKnown RBP14.17□□□□□ -0.14
PTPN2-201ENST00000309660 AIMP1Q12904 312 aaKnown RBP14.17□□□□□ -0.14
PTPN2-201ENST00000309660 FOXD4L5Q5VV16 416 aaPredicted RBP14.17□□□□□ -0.14
PTPN2-201ENST00000309660 FOXD4L4Q8WXT5 416 aaPredicted RBP14.17□□□□□ -0.14
PTPN2-201ENST00000309660 KRT28Q7Z3Y7 464 aa14.16□□□□□ -0.14
PTPN2-201ENST00000309660 XRN1Q8IZH2 1706 aaKnown RBP14.16□□□□□ -0.14
PTPN2-201ENST00000309660 PRAMEF22A3QJZ6 481 aa14.16□□□□□ -0.14
PTPN2-201ENST00000309660 ST18O60284 1047 aa14.16□□□□□ -0.14
PTPN2-201ENST00000309660 NLRP2Q9NX02 1062 aa14.16□□□□□ -0.14
PTPN2-201ENST00000309660 AXIN2Q9Y2T1 843 aa14.15□□□□□ -0.14
PTPN2-201ENST00000309660 NEK4P51957 841 aa14.15□□□□□ -0.14
PTPN2-201ENST00000309660 DNAAF4Q8WXU2 420 aa14.15□□□□□ -0.14
PTPN2-201ENST00000309660 CSB-PGBD3P0DP91 1061 aa14.14□□□□□ -0.15
PTPN2-201ENST00000309660 EIF5BO60841 1220 aaKnown RBP14.14□□□□□ -0.15
PTPN2-201ENST00000309660 NCLP19338 710 aaKnown RBP14.14□□□□□ -0.15
PTPN2-201ENST00000309660 RAB3GAP1Q15042 981 aa14.14□□□□□ -0.15
PTPN2-201ENST00000309660 AKAP4Q5JQC9 854 aa14.14□□□□□ -0.15
PTPN2-201ENST00000309660 L1TD1Q5T7N2 865 aaKnown RBP14.14□□□□□ -0.15
PTPN2-201ENST00000309660 UNC5CLQ8IV45 518 aa14.14□□□□□ -0.15
PTPN2-201ENST00000309660 C9orf78Q9NZ63 289 aaPredicted RBP14.14□□□□□ -0.15
PTPN2-201ENST00000309660 CABLES1Q8TDN4 633 aa14.13□□□□□ -0.15
PTPN2-201ENST00000309660 CIZ1Q9ULV3 898 aaPredicted RBP14.13□□□□□ -0.15
PTPN2-201ENST00000309660 SLC39A6Q13433 755 aa14.13□□□□□ -0.15
PTPN2-201ENST00000309660 PROSER3Q2NL68 480 aa14.13□□□□□ -0.15
PTPN2-201ENST00000309660 ARHGEF25Q86VW2 580 aa14.13□□□□□ -0.15
PTPN2-201ENST00000309660 ZGPATQ8N5A5 531 aaKnown RBP14.13□□□□□ -0.15
PTPN2-201ENST00000309660 PANK2Q9BZ23 570 aa14.13□□□□□ -0.15
PTPN2-201ENST00000309660 NWD1Q149M9 1564 aa14.13□□□□□ -0.15
PTPN2-201ENST00000309660 ADGRL3Q9HAR2 1447 aa14.13□□□□□ -0.15
PTPN2-201ENST00000309660 DDIT3P35638 169 aa14.13□□□□□ -0.15
PTPN2-201ENST00000309660 GOLGA6L22H0YM25 854 aa14.12□□□□□ -0.15
PTPN2-201ENST00000309660 PKP1Q13835 747 aa14.12□□□□□ -0.15
PTPN2-201ENST00000309660 RNMTO43148 476 aaKnown RBP14.12□□□□□ -0.15
PTPN2-201ENST00000309660 CWF19L2Q2TBE0 894 aaKnown RBP14.12□□□□□ -0.15
PTPN2-201ENST00000309660 MAP3K2Q9Y2U5 619 aa14.12□□□□□ -0.15
PTPN2-201ENST00000309660 IBTKQ9P2D0 1353 aaPredicted RBP14.12□□□□□ -0.15
PTPN2-201ENST00000309660 UPF3BQ9BZI7 483 aaKnown RBP14.11□□□□□ -0.15
PTPN2-201ENST00000309660 NCOA3Q9Y6Q9 1424 aa14.11□□□□□ -0.15
PTPN2-201ENST00000309660 SOS1Q07889 1333 aaPredicted RBP14.11□□□□□ -0.15
PTPN2-201ENST00000309660 MCTP1Q6DN14 999 aa14.11□□□□□ -0.15
PTPN2-201ENST00000309660 ESYT1Q9BSJ8 1104 aa14.11□□□□□ -0.15
PTPN2-201ENST00000309660 MYL6BP14649 208 aa14.11□□□□□ -0.15
PTPN2-201ENST00000309660 AMOTQ4VCS5 1084 aa14.11□□□□□ -0.15
PTPN2-201ENST00000309660 RHPN1Q8TCX5 695 aa14.11□□□□□ -0.15
PTPN2-201ENST00000309660 RAPGEF4Q8WZA2 1011 aa14.11□□□□□ -0.15
PTPN2-201ENST00000309660 BABAM1Q9NWV8 329 aa14.11□□□□□ -0.15
PTPN2-201ENST00000309660 XRCC6P12956 609 aaKnown RBP eCLIP14.1□□□□□ -0.15
PTPN2-201ENST00000309660 CHRNA2Q15822 529 aa14.1□□□□□ -0.15
PTPN2-201ENST00000309660 OSBPL3Q9H4L5 887 aa14.1□□□□□ -0.15
PTPN2-201ENST00000309660 DBF4Q9UBU7 674 aaPredicted RBP14.1□□□□□ -0.15
PTPN2-201ENST00000309660 NPHP4O75161 1426 aaPredicted RBP14.1□□□□□ -0.15
PTPN2-201ENST00000309660 MCCP23508 829 aa14.1□□□□□ -0.15
PTPN2-201ENST00000309660 PIP4K2AP48426 406 aaPredicted RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms