RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 PA2G4Q9UQ80 394 aaKnown RBP15.33■□□□□ 0.04
RETREG3-201ENST00000309428 TCEANC2Q96MN5 208 aa15.33■□□□□ 0.04
RETREG3-201ENST00000309428 FIBPO43427 364 aa15.32■□□□□ 0.04
RETREG3-201ENST00000309428 CCDC30Q5VVM6 783 aa15.32■□□□□ 0.04
RETREG3-201ENST00000309428 TSC1Q92574 1164 aa15.32■□□□□ 0.04
RETREG3-201ENST00000309428 CHPF2Q9P2E5 772 aa15.32■□□□□ 0.04
RETREG3-201ENST00000309428 PRAMEF22A3QJZ6 481 aa15.32■□□□□ 0.04
RETREG3-201ENST00000309428 NPHP1O15259 732 aa15.32■□□□□ 0.04
RETREG3-201ENST00000309428 AAMPQ13685 434 aa15.32■□□□□ 0.04
RETREG3-201ENST00000309428 ZNF771Q7L3S4 317 aaPredicted RBP15.32■□□□□ 0.04
RETREG3-201ENST00000309428 TTC22Q5TAA0 569 aa15.31■□□□□ 0.04
RETREG3-201ENST00000309428 THEMISQ8N1K5 641 aaPredicted RBP15.31■□□□□ 0.04
RETREG3-201ENST00000309428 LRRCC1Q9C099 1032 aa15.31■□□□□ 0.04
RETREG3-201ENST00000309428 ERBB4Q15303 1308 aa15.31■□□□□ 0.04
RETREG3-201ENST00000309428 VPS37CA5D8V6 355 aaPredicted RBP15.31■□□□□ 0.04
RETREG3-201ENST00000309428 REC8O95072 547 aa15.31■□□□□ 0.04
RETREG3-201ENST00000309428 PRIM1P49642 420 aaKnown RBP15.31■□□□□ 0.04
RETREG3-201ENST00000309428 ANTXR1Q9H6X2 564 aa15.31■□□□□ 0.04
RETREG3-201ENST00000309428 KLHDC4Q8TBB5 520 aa15.3■□□□□ 0.04
RETREG3-201ENST00000309428 BTBD11A6QL63 1104 aa15.3■□□□□ 0.04
RETREG3-201ENST00000309428 KDM4AO75164 1064 aa15.3■□□□□ 0.04
RETREG3-201ENST00000309428 CWF19L2Q2TBE0 894 aaKnown RBP15.3■□□□□ 0.04
RETREG3-201ENST00000309428 PHF8Q9UPP1 1060 aa15.3■□□□□ 0.04
RETREG3-201ENST00000309428 NDUFB9Q9Y6M9 179 aa15.3■□□□□ 0.04
RETREG3-201ENST00000309428 LAMC1P11047 1609 aa15.3■□□□□ 0.04
RETREG3-201ENST00000309428 CSPP1Q1MSJ5 1256 aa15.29■□□□□ 0.04
RETREG3-201ENST00000309428 ANKRD44Q8N8A2 993 aa15.29■□□□□ 0.04
RETREG3-201ENST00000309428 CHL1O00533 1208 aa15.29■□□□□ 0.04
RETREG3-201ENST00000309428 RABEP1Q15276 862 aa15.29■□□□□ 0.04
RETREG3-201ENST00000309428 PPP1R42Q7Z4L9 355 aa15.29■□□□□ 0.04
RETREG3-201ENST00000309428 CCDC39Q9UFE4 941 aa15.29■□□□□ 0.04
RETREG3-201ENST00000309428 CIZ1Q9ULV3 898 aaPredicted RBP15.29■□□□□ 0.04
RETREG3-201ENST00000309428 PTPRMP28827 1452 aa15.29■□□□□ 0.04
RETREG3-201ENST00000309428 SPDYE4A6NLX3 237 aa15.29■□□□□ 0.04
RETREG3-201ENST00000309428 IL17REQ8NFR9 667 aa15.29■□□□□ 0.04
RETREG3-201ENST00000309428 NEXMIFQ5QGS0 1516 aa15.29■□□□□ 0.04
RETREG3-201ENST00000309428 ZRSR1Q15695 479 aaKnown RBP15.28■□□□□ 0.04
RETREG3-201ENST00000309428 CCDC8Q9H0W5 538 aaPredicted RBP15.28■□□□□ 0.04
RETREG3-201ENST00000309428 DCTPP1Q9H773 170 aa15.28■□□□□ 0.04
RETREG3-201ENST00000309428 NBPF7P0C2Y1 421 aaPredicted RBP15.28■□□□□ 0.04
RETREG3-201ENST00000309428 ZSCAN23Q3MJ62 389 aa15.28■□□□□ 0.04
RETREG3-201ENST00000309428 PROSER2Q86WR7 435 aaPredicted RBP15.28■□□□□ 0.04
RETREG3-201ENST00000309428 UNC5CLQ8IV45 518 aa15.28■□□□□ 0.04
RETREG3-201ENST00000309428 LRRC7Q96NW7 1537 aa15.28■□□□□ 0.04
RETREG3-201ENST00000309428 MX1P20591 662 aa15.28■□□□□ 0.04
RETREG3-201ENST00000309428 USP25Q9UHP3 1055 aa15.28■□□□□ 0.04
RETREG3-201ENST00000309428 NBPF6Q5VWK0 638 aa15.27■□□□□ 0.04
RETREG3-201ENST00000309428 NBPF4Q96M43 638 aa15.27■□□□□ 0.04
RETREG3-201ENST00000309428 SRCIN1Q9C0H9 1055 aa15.27■□□□□ 0.04
RETREG3-201ENST00000309428 ERC2O15083 957 aa15.27■□□□□ 0.03
RETREG3-201ENST00000309428 PDE1AP54750 535 aa15.27■□□□□ 0.03
RETREG3-201ENST00000309428 RPAP2Q8IXW5 612 aaPredicted RBP15.27■□□□□ 0.03
RETREG3-201ENST00000309428 PUS7Q96PZ0 661 aaKnown RBP15.27■□□□□ 0.03
RETREG3-201ENST00000309428 ISY1Q9ULR0 285 aaKnown RBP15.27■□□□□ 0.03
RETREG3-201ENST00000309428 TSPY26PQ9H489 355 aa15.27■□□□□ 0.03
RETREG3-201ENST00000309428 NEO1Q92859 1461 aa15.27■□□□□ 0.03
RETREG3-201ENST00000309428 EDC4Q6P2E9 1401 aaKnown RBP15.26■□□□□ 0.03
RETREG3-201ENST00000309428 HOXC9P31274 260 aa15.26■□□□□ 0.03
RETREG3-201ENST00000309428 RIC3Q7Z5B4 369 aa15.26■□□□□ 0.03
RETREG3-201ENST00000309428 ALKQ9UM73 1620 aa15.26■□□□□ 0.03
RETREG3-201ENST00000309428 STK3Q13188 491 aa15.26■□□□□ 0.03
RETREG3-201ENST00000309428 CPS1P31327 1500 aa15.26■□□□□ 0.03
RETREG3-201ENST00000309428 DIP2CQ9Y2E4 1556 aa15.26■□□□□ 0.03
RETREG3-201ENST00000309428 C17orf53Q8N3J3 647 aaPredicted RBP15.26■□□□□ 0.03
RETREG3-201ENST00000309428 DIAPH3Q9NSV4 1193 aa15.26■□□□□ 0.03
RETREG3-201ENST00000309428 PALD1Q9ULE6 856 aa15.26■□□□□ 0.03
RETREG3-201ENST00000309428 ATP5J2-PTCD1G3V325 749 aa15.25■□□□□ 0.03
RETREG3-201ENST00000309428 PTCD1O75127 700 aaKnown RBP15.25■□□□□ 0.03
RETREG3-201ENST00000309428 PHF14O94880 888 aa15.25■□□□□ 0.03
RETREG3-201ENST00000309428 A2ML1A8K2U0 1454 aa15.25■□□□□ 0.03
RETREG3-201ENST00000309428 PIK3C2BO00750 1634 aa15.25■□□□□ 0.03
RETREG3-201ENST00000309428 CCT4P50991 539 aaKnown RBP15.25■□□□□ 0.03
RETREG3-201ENST00000309428 IFIT2P09913 472 aaKnown RBP15.25■□□□□ 0.03
RETREG3-201ENST00000309428 IQSEC2Q5JU85 1478 aa15.25■□□□□ 0.03
RETREG3-201ENST00000309428 VWDEQ8N2E2 1590 aa15.24■□□□□ 0.03
RETREG3-201ENST00000309428 ABCC4O15439 1325 aa15.24■□□□□ 0.03
RETREG3-201ENST00000309428 GNAI3P08754 354 aa15.24■□□□□ 0.03
RETREG3-201ENST00000309428 RBSNQ9H1K0 784 aa15.24■□□□□ 0.03
RETREG3-201ENST00000309428 ARAP3Q8WWN8 1544 aa15.24■□□□□ 0.03
RETREG3-201ENST00000309428 TMEM2Q9UHN6 1383 aa15.24■□□□□ 0.03
RETREG3-201ENST00000309428 ZNF853P0CG23 659 aa15.24■□□□□ 0.03
RETREG3-201ENST00000309428 KLHL40Q2TBA0 621 aa15.24■□□□□ 0.03
RETREG3-201ENST00000309428 FERMT3Q86UX7 667 aa15.24■□□□□ 0.03
RETREG3-201ENST00000309428 CD163L1Q9NR16 1453 aa15.24■□□□□ 0.03
RETREG3-201ENST00000309428 RAB3GAP1Q15042 981 aa15.24■□□□□ 0.03
RETREG3-201ENST00000309428 TTC12Q9H892 705 aaPredicted RBP15.24■□□□□ 0.03
RETREG3-201ENST00000309428 STRN4Q9NRL3 753 aa15.24■□□□□ 0.03
RETREG3-201ENST00000309428 FAM135BQ49AJ0 1406 aa15.23■□□□□ 0.03
RETREG3-201ENST00000309428 MYO5BQ9ULV0 1848 aa15.23■□□□□ 0.03
RETREG3-201ENST00000309428 ARHGAP45Q92619 1136 aa15.23■□□□□ 0.03
RETREG3-201ENST00000309428 SIGLEC1Q9BZZ2 1709 aa15.23■□□□□ 0.03
RETREG3-201ENST00000309428 BOLA2Q9H3K6 86 aa15.23■□□□□ 0.03
RETREG3-201ENST00000309428 FSD2A1L4K1 749 aa15.23■□□□□ 0.03
RETREG3-201ENST00000309428 DEPDC5O75140 1603 aa15.22■□□□□ 0.03
RETREG3-201ENST00000309428 NRXN1Q9ULB1 1477 aa15.22■□□□□ 0.03
RETREG3-201ENST00000309428 PROSER3Q2NL68 480 aa15.22■□□□□ 0.03
RETREG3-201ENST00000309428 SYTL4Q96C24 671 aaPredicted RBP15.22■□□□□ 0.03
RETREG3-201ENST00000309428 MAP7D2Q96T17 732 aa15.22■□□□□ 0.03
RETREG3-201ENST00000309428 DNAJC2Q99543 621 aaKnown RBP15.22■□□□□ 0.03
RETREG3-201ENST00000309428 MAP3K2Q9Y2U5 619 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms