RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 G2E3Q7L622 706 aa13.45□□□□□ -0.26
PTPN7-201ENST00000309017 JARID2Q92833 1246 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-201ENST00000309017 ZHX1Q9UKY1 873 aaPredicted RBP13.45□□□□□ -0.26
PTPN7-201ENST00000309017 CD163L1Q9NR16 1453 aa13.45□□□□□ -0.26
PTPN7-201ENST00000309017 ABCC3O15438 1527 aa13.45□□□□□ -0.26
PTPN7-201ENST00000309017 NOLC1Q14978 699 aaKnown RBP eCLIP13.45□□□□□ -0.26
PTPN7-201ENST00000309017 TXNDC2Q86VQ3 553 aa13.44□□□□□ -0.26
PTPN7-201ENST00000309017 CNPY2Q9Y2B0 182 aa13.44□□□□□ -0.26
PTPN7-201ENST00000309017 CHMP3Q9Y3E7 222 aa13.44□□□□□ -0.26
PTPN7-201ENST00000309017 ATP10DQ9P241 1426 aa13.44□□□□□ -0.26
PTPN7-201ENST00000309017 CCDC183Q5T5S1 534 aa13.44□□□□□ -0.26
PTPN7-201ENST00000309017 SPC24Q8NBT2 197 aa13.44□□□□□ -0.26
PTPN7-201ENST00000309017 REREQ9P2R6 1566 aa13.44□□□□□ -0.26
PTPN7-201ENST00000309017 NEXMIFQ5QGS0 1516 aa13.44□□□□□ -0.26
PTPN7-201ENST00000309017 CHMLP26374 656 aa13.43□□□□□ -0.26
PTPN7-201ENST00000309017 NUDT16Q96DE0 195 aaKnown RBP13.43□□□□□ -0.26
PTPN7-201ENST00000309017 INTS4Q96HW7 963 aaKnown RBP13.43□□□□□ -0.26
PTPN7-201ENST00000309017 SMC3Q9UQE7 1217 aa13.43□□□□□ -0.26
PTPN7-201ENST00000309017 CBX1P83916 185 aa13.43□□□□□ -0.26
PTPN7-201ENST00000309017 CHL1O00533 1208 aa13.43□□□□□ -0.26
PTPN7-201ENST00000309017 NUTM1Q86Y26 1132 aa13.43□□□□□ -0.26
PTPN7-201ENST00000309017 DTNBO60941 627 aa13.42□□□□□ -0.26
PTPN7-201ENST00000309017 MYRIPQ8NFW9 859 aa13.42□□□□□ -0.26
PTPN7-201ENST00000309017 DNAJC5Q9H3Z4 198 aa13.42□□□□□ -0.26
PTPN7-201ENST00000309017 KIF3AQ9Y496 699 aa13.42□□□□□ -0.26
PTPN7-201ENST00000309017 PTPRMP28827 1452 aa13.42□□□□□ -0.26
PTPN7-201ENST00000309017 GNAI3P08754 354 aa13.42□□□□□ -0.26
PTPN7-201ENST00000309017 CUL4AQ13619 759 aa13.42□□□□□ -0.26
PTPN7-201ENST00000309017 EIF4A2Q14240 407 aaKnown RBP13.42□□□□□ -0.26
PTPN7-201ENST00000309017 SRCIN1Q9C0H9 1055 aa13.42□□□□□ -0.26
PTPN7-201ENST00000309017 WASLO00401 505 aaPredicted RBP13.42□□□□□ -0.26
PTPN7-201ENST00000309017 ANAPC15P60006 121 aa13.42□□□□□ -0.26
PTPN7-201ENST00000309017 MLECQ14165 292 aa13.42□□□□□ -0.26
PTPN7-201ENST00000309017 CCDC94Q9BW85 323 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-201ENST00000309017 ATP6V1DQ9Y5K8 247 aa13.41□□□□□ -0.26
PTPN7-201ENST00000309017 VPS37CA5D8V6 355 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-201ENST00000309017 OS9Q13438 667 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-201ENST00000309017 GIMAP6Q6P9H5 292 aa13.41□□□□□ -0.26
PTPN7-201ENST00000309017 DRC7Q8IY82 874 aa13.41□□□□□ -0.26
PTPN7-201ENST00000309017 PIBF1Q8WXW3 757 aa13.41□□□□□ -0.26
PTPN7-201ENST00000309017 PRIMPOLQ96LW4 560 aa13.41□□□□□ -0.26
PTPN7-201ENST00000309017 UVSSAQ2YD98 709 aa13.41□□□□□ -0.26
PTPN7-201ENST00000309017 SMAP1Q8IYB5 467 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-201ENST00000309017 CCDC61Q9Y6R9 512 aa13.41□□□□□ -0.26
PTPN7-201ENST00000309017 OSBPL3Q9H4L5 887 aa13.4□□□□□ -0.26
PTPN7-201ENST00000309017 LRRFIP2Q9Y608 721 aaKnown RBP13.4□□□□□ -0.26
PTPN7-201ENST00000309017 PNMA6EA0A0J9YXQ4 647 aa13.4□□□□□ -0.26
PTPN7-201ENST00000309017 SURF6O75683 361 aaKnown RBP13.4□□□□□ -0.26
PTPN7-201ENST00000309017 ARHGAP31Q2M1Z3 1444 aa13.4□□□□□ -0.26
PTPN7-201ENST00000309017 FOXO3O43524 673 aa13.4□□□□□ -0.27
PTPN7-201ENST00000309017 LETM1O95202 739 aaPredicted RBP13.4□□□□□ -0.27
PTPN7-201ENST00000309017 HSP90AB2PQ58FF8 381 aa13.39□□□□□ -0.27
PTPN7-201ENST00000309017 UNC5CLQ8IV45 518 aa13.39□□□□□ -0.27
PTPN7-201ENST00000309017 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.39□□□□□ -0.27
PTPN7-201ENST00000309017 GOLGA6L6A8MZA4 724 aa13.39□□□□□ -0.27
PTPN7-201ENST00000309017 UBTFL1P0CB47 393 aaPredicted RBP13.39□□□□□ -0.27
PTPN7-201ENST00000309017 KCNJ4P48050 445 aa13.39□□□□□ -0.27
PTPN7-201ENST00000309017 PPP4R3BQ5MIZ7 849 aa13.39□□□□□ -0.27
PTPN7-201ENST00000309017 STX6O43752 255 aa13.39□□□□□ -0.27
PTPN7-201ENST00000309017 ZSCAN22P10073 491 aaPredicted RBP13.38□□□□□ -0.27
PTPN7-201ENST00000309017 UBE2HP62256 183 aa13.38□□□□□ -0.27
PTPN7-201ENST00000309017 EDC4Q6P2E9 1401 aaKnown RBP13.38□□□□□ -0.27
PTPN7-201ENST00000309017 GOLGA6L4A6NEF3 574 aa13.38□□□□□ -0.27
PTPN7-201ENST00000309017 HECW2Q9P2P5 1572 aa13.38□□□□□ -0.27
PTPN7-201ENST00000309017 FLIIQ13045 1269 aa13.37□□□□□ -0.27
PTPN7-201ENST00000309017 CWC27Q6UX04 472 aaKnown RBP13.37□□□□□ -0.27
PTPN7-201ENST00000309017 DIAPH3Q9NSV4 1193 aa13.37□□□□□ -0.27
PTPN7-201ENST00000309017 CCDC83Q8IWF9 413 aa13.37□□□□□ -0.27
PTPN7-201ENST00000309017 MLH3Q9UHC1 1453 aa13.37□□□□□ -0.27
PTPN7-201ENST00000309017 MAP2P11137 1827 aaKnown RBP13.37□□□□□ -0.27
PTPN7-201ENST00000309017 SPDYE4A6NLX3 237 aa13.37□□□□□ -0.27
PTPN7-201ENST00000309017 DDX54Q8TDD1 881 aaKnown RBP13.37□□□□□ -0.27
PTPN7-201ENST00000309017 ARHGEF40Q8TER5 1519 aa13.37□□□□□ -0.27
PTPN7-201ENST00000309017 CDK12Q9NYV4 1490 aaPredicted RBP13.37□□□□□ -0.27
PTPN7-201ENST00000309017 KDM4AO75164 1064 aa13.36□□□□□ -0.27
PTPN7-201ENST00000309017 CPA1P15085 419 aa13.36□□□□□ -0.27
PTPN7-201ENST00000309017 SYT1P21579 422 aa13.36□□□□□ -0.27
PTPN7-201ENST00000309017 BCL11BQ9C0K0 894 aaPredicted RBP13.36□□□□□ -0.27
PTPN7-201ENST00000309017 CASTP20810 708 aaKnown RBP13.36□□□□□ -0.27
PTPN7-201ENST00000309017 CCDC30Q5VVM6 783 aa13.36□□□□□ -0.27
PTPN7-201ENST00000309017 PDCL2Q8N4E4 241 aa13.36□□□□□ -0.27
PTPN7-201ENST00000309017 SPG7Q9UQ90 795 aa13.36□□□□□ -0.27
PTPN7-201ENST00000309017 KNDC1Q76NI1 1749 aa13.36□□□□□ -0.27
PTPN7-201ENST00000309017 AK2P54819 239 aa13.36□□□□□ -0.27
PTPN7-201ENST00000309017 ATP8B2P98198 1209 aa13.36□□□□□ -0.27
PTPN7-201ENST00000309017 LIMCH1Q9UPQ0 1083 aa13.36□□□□□ -0.27
PTPN7-201ENST00000309017 RGS12O14924 1447 aa13.36□□□□□ -0.27
PTPN7-201ENST00000309017 CPSF1Q10570 1443 aaKnown RBP13.36□□□□□ -0.27
PTPN7-201ENST00000309017 PRDM4Q9UKN5 801 aa13.35□□□□□ -0.27
PTPN7-201ENST00000309017 KIAA0232Q92628 1395 aa13.35□□□□□ -0.27
PTPN7-201ENST00000309017 ATP7BP35670 1465 aa13.35□□□□□ -0.27
PTPN7-201ENST00000309017 FRMPD1Q5SYB0 1578 aa13.35□□□□□ -0.27
PTPN7-201ENST00000309017 F13A1P00488 732 aa13.35□□□□□ -0.27
PTPN7-201ENST00000309017 AMPHP49418 695 aa13.35□□□□□ -0.27
PTPN7-201ENST00000309017 DNM1Q05193 864 aaKnown RBP13.35□□□□□ -0.27
PTPN7-201ENST00000309017 CNTROBQ8N137 903 aa13.35□□□□□ -0.27
PTPN7-201ENST00000309017 ANKRD26Q9UPS8 1709 aa13.35□□□□□ -0.27
PTPN7-201ENST00000309017 CCDC192P0DO97 292 aa13.34□□□□□ -0.27
PTPN7-201ENST00000309017 CAMK4Q16566 473 aa13.34□□□□□ -0.27
PTPN7-201ENST00000309017 FERMT3Q86UX7 667 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms