RNA–Protein interactions for RNA: ENST00000304992.10

PRPF8-201, Transcript of pre-mRNA processing factor 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF8, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-201ENST00000304992 TNMDQ9H2S6 317 aa11.95□□□□□ -0.5
PRPF8-201ENST00000304992 SEC63Q9UGP8 760 aaKnown RBP11.95□□□□□ -0.5
PRPF8-201ENST00000304992 FBLN1P23142 703 aa11.95□□□□□ -0.5
PRPF8-201ENST00000304992 BMP2KQ9NSY1 1161 aaPredicted RBP11.95□□□□□ -0.5
PRPF8-201ENST00000304992 KIF14Q15058 1648 aa11.95□□□□□ -0.5
PRPF8-201ENST00000304992 GRM1Q13255 1194 aa11.95□□□□□ -0.5
PRPF8-201ENST00000304992 AEBP1Q8IUX7 1158 aa11.95□□□□□ -0.5
PRPF8-201ENST00000304992 KIF1BPQ96EK5 621 aa11.95□□□□□ -0.5
PRPF8-201ENST00000304992 ZNHIT6Q9NWK9 470 aaKnown RBP11.95□□□□□ -0.5
PRPF8-201ENST00000304992 HMGXB3Q12766 1538 aa11.95□□□□□ -0.5
PRPF8-201ENST00000304992 ANKRD18BA2A2Z9 1011 aa11.95□□□□□ -0.5
PRPF8-201ENST00000304992 WDHD1O75717 1129 aaPredicted RBP11.94□□□□□ -0.5
PRPF8-201ENST00000304992 SLC5A1P13866 664 aa11.94□□□□□ -0.5
PRPF8-201ENST00000304992 MBD3O95983 291 aa11.94□□□□□ -0.5
PRPF8-201ENST00000304992 KRT85P78386 507 aa11.94□□□□□ -0.5
PRPF8-201ENST00000304992 HMGB2P26583 209 aaKnown RBP11.94□□□□□ -0.5
PRPF8-201ENST00000304992 CDR1P51861 262 aa11.94□□□□□ -0.5
PRPF8-201ENST00000304992 RPAP2Q8IXW5 612 aaPredicted RBP11.94□□□□□ -0.5
PRPF8-201ENST00000304992 ANKRD24Q8TF21 1146 aa11.94□□□□□ -0.5
PRPF8-201ENST00000304992 LRRFIP2Q9Y608 721 aaKnown RBP11.94□□□□□ -0.5
PRPF8-201ENST00000304992 LRPPRCP42704 1394 aaKnown RBP11.94□□□□□ -0.5
PRPF8-201ENST00000304992 NAIPQ13075 1403 aa11.94□□□□□ -0.5
PRPF8-201ENST00000304992 LETM1O95202 739 aaPredicted RBP11.94□□□□□ -0.5
PRPF8-201ENST00000304992 ZNF287Q9HBT7 754 aa11.94□□□□□ -0.5
PRPF8-201ENST00000304992 NOM1Q5C9Z4 860 aaKnown RBP11.94□□□□□ -0.5
PRPF8-201ENST00000304992 ZNF444Q8N0Y2 327 aaPredicted RBP11.94□□□□□ -0.5
PRPF8-201ENST00000304992 PIP4K2AP48426 406 aaPredicted RBP11.93□□□□□ -0.5
PRPF8-201ENST00000304992 MAP3K12Q12852 859 aa11.93□□□□□ -0.5
PRPF8-201ENST00000304992 HSP90AB3PQ58FF7 597 aa11.93□□□□□ -0.5
PRPF8-201ENST00000304992 SPATA32Q96LK8 384 aa11.93□□□□□ -0.5
PRPF8-201ENST00000304992 K7ELQ4 463 aaPredicted RBP11.93□□□□□ -0.5
PRPF8-201ENST00000304992 PRPF40BQ6NWY9 871 aaKnown RBP11.93□□□□□ -0.5
PRPF8-201ENST00000304992 FAM177A1Q8N128 213 aaPredicted RBP11.93□□□□□ -0.5
PRPF8-201ENST00000304992 ARGLU1Q9NWB6 273 aaPredicted RBP11.93□□□□□ -0.5
PRPF8-201ENST00000304992 CADPS2Q86UW7 1296 aa11.93□□□□□ -0.5
PRPF8-201ENST00000304992 DNAAF4Q8WXU2 420 aa11.93□□□□□ -0.5
PRPF8-201ENST00000304992 WDR33Q9C0J8 1336 aaKnown RBP11.93□□□□□ -0.5
PRPF8-201ENST00000304992 ANXA1P04083 346 aa11.93□□□□□ -0.5
PRPF8-201ENST00000304992 PPFIBP1Q86W92 1011 aa11.93□□□□□ -0.5
PRPF8-201ENST00000304992 SSH1Q8WYL5 1049 aa11.93□□□□□ -0.5
PRPF8-201ENST00000304992 HSP90B2PQ58FF3 399 aa11.92□□□□□ -0.5
PRPF8-201ENST00000304992 MAP3K2Q9Y2U5 619 aa11.92□□□□□ -0.5
PRPF8-201ENST00000304992 FAM135AQ9P2D6 1515 aa11.92□□□□□ -0.5
PRPF8-201ENST00000304992 FANCIQ9NVI1 1328 aa11.92□□□□□ -0.5
PRPF8-201ENST00000304992 MX1P20591 662 aa11.92□□□□□ -0.5
PRPF8-201ENST00000304992 TEX35Q5T0J7 233 aa11.92□□□□□ -0.5
PRPF8-201ENST00000304992 NOS1P29475 1434 aa11.92□□□□□ -0.5
PRPF8-201ENST00000304992 KRT32Q14532 448 aa11.92□□□□□ -0.5
PRPF8-201ENST00000304992 IFNL2Q8IZJ0 200 aa11.92□□□□□ -0.5
PRPF8-201ENST00000304992 FAM43AQ8N2R8 423 aa11.92□□□□□ -0.5
PRPF8-201ENST00000304992 DENND4BO75064 1496 aaPredicted RBP11.92□□□□□ -0.5
PRPF8-201ENST00000304992 ACEP12821 1306 aa11.92□□□□□ -0.5
PRPF8-201ENST00000304992 DDX46Q7L014 1031 aaKnown RBP11.92□□□□□ -0.5
PRPF8-201ENST00000304992 FERMT3Q86UX7 667 aa11.92□□□□□ -0.5
PRPF8-201ENST00000304992 SNRKQ9NRH2 765 aa11.92□□□□□ -0.5
PRPF8-201ENST00000304992 CCDC39Q9UFE4 941 aa11.92□□□□□ -0.5
PRPF8-201ENST00000304992 FAM83GA6ND36 823 aa11.92□□□□□ -0.5
PRPF8-201ENST00000304992 SLFN5Q08AF3 891 aa11.92□□□□□ -0.5
PRPF8-201ENST00000304992 FEZ1Q99689 392 aa11.92□□□□□ -0.5
PRPF8-201ENST00000304992 U3KPZ7 1027 aaPredicted RBP11.92□□□□□ -0.5
PRPF8-201ENST00000304992 CEP57L1Q8IYX8 460 aa11.91□□□□□ -0.5
PRPF8-201ENST00000304992 PCF11O94913 1555 aaKnown RBP11.91□□□□□ -0.5
PRPF8-201ENST00000304992 GUCY1B3Q02153 619 aa11.91□□□□□ -0.5
PRPF8-201ENST00000304992 HYPKQ9NX55 129 aa11.91□□□□□ -0.5
PRPF8-201ENST00000304992 DBF4Q9UBU7 674 aaPredicted RBP11.91□□□□□ -0.5
PRPF8-201ENST00000304992 FANCAO15360 1455 aa11.91□□□□□ -0.5
PRPF8-201ENST00000304992 MSH6P52701 1360 aa11.91□□□□□ -0.5
PRPF8-201ENST00000304992 GLRX3O76003 335 aaKnown RBP11.91□□□□□ -0.5
PRPF8-201ENST00000304992 NEFHP12036 1026 aa11.91□□□□□ -0.5
PRPF8-201ENST00000304992 UPF3BQ9BZI7 483 aaKnown RBP11.91□□□□□ -0.5
PRPF8-201ENST00000304992 LDHAL6AQ6ZMR3 332 aa11.91□□□□□ -0.5
PRPF8-201ENST00000304992 CCDC83Q8IWF9 413 aa11.91□□□□□ -0.5
PRPF8-201ENST00000304992 WDR97A6NE52 1622 aa11.91□□□□□ -0.5
PRPF8-201ENST00000304992 TOM1O60784 492 aa11.91□□□□□ -0.5
PRPF8-201ENST00000304992 CABLES1Q8TDN4 633 aa11.91□□□□□ -0.5
PRPF8-201ENST00000304992 ACBD3Q9H3P7 528 aa11.91□□□□□ -0.5
PRPF8-201ENST00000304992 DACH1Q9UI36 760 aa11.91□□□□□ -0.5
PRPF8-201ENST00000304992 GRIN2AQ12879 1464 aa11.9□□□□□ -0.5
PRPF8-201ENST00000304992 SSR1P43307 286 aaKnown RBP11.9□□□□□ -0.5
PRPF8-201ENST00000304992 TNIP1Q15025 636 aa11.9□□□□□ -0.5
PRPF8-201ENST00000304992 UBA5Q9GZZ9 404 aa11.9□□□□□ -0.5
PRPF8-201ENST00000304992 CCDC192P0DO97 292 aa11.9□□□□□ -0.5
PRPF8-201ENST00000304992 WASF1Q92558 559 aa11.9□□□□□ -0.5
PRPF8-201ENST00000304992 MYO6Q9UM54 1294 aa11.9□□□□□ -0.5
PRPF8-201ENST00000304992 LIG1P18858 919 aa11.9□□□□□ -0.5
PRPF8-201ENST00000304992 UBE3BQ7Z3V4 1068 aa11.9□□□□□ -0.5
PRPF8-201ENST00000304992 HSPA2P54652 639 aa11.9□□□□□ -0.5
PRPF8-201ENST00000304992 NBPF6Q5VWK0 638 aa11.9□□□□□ -0.5
PRPF8-201ENST00000304992 NBPF5PQ86XG9 351 aaPredicted RBP11.9□□□□□ -0.5
PRPF8-201ENST00000304992 NBPF4Q96M43 638 aa11.9□□□□□ -0.5
PRPF8-201ENST00000304992 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.89□□□□□ -0.51
PRPF8-201ENST00000304992 VAT1LQ9HCJ6 419 aa11.89□□□□□ -0.51
PRPF8-201ENST00000304992 LARP6Q9BRS8 491 aaKnown RBP11.89□□□□□ -0.51
PRPF8-201ENST00000304992 ECM2O94769 699 aaPredicted RBP11.89□□□□□ -0.51
PRPF8-201ENST00000304992 RAB11FIP3O75154 756 aa11.89□□□□□ -0.51
PRPF8-201ENST00000304992 CTCFLQ8NI51 663 aaPredicted RBP11.89□□□□□ -0.51
PRPF8-201ENST00000304992 CCDC144CPQ8IYA2 1237 aa11.89□□□□□ -0.51
PRPF8-201ENST00000304992 ZNF213O14771 459 aa11.89□□□□□ -0.51
PRPF8-201ENST00000304992 NEBLO76041 1014 aa11.89□□□□□ -0.51
PRPF8-201ENST00000304992 MRE11P49959 708 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms