RNA–Protein interactions for RNA: ENST00000302631.7

SCAMP3-201, Transcript of secretory carrier membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP3, Length 1,446 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-201ENST00000302631 WWC1Q8IX03 1113 aa26.3■■□□□ 1.8
SCAMP3-201ENST00000302631 UPF1Q92900 1129 aaKnown RBP eCLIP26.3■■□□□ 1.82e-8■■■■■ 30.6
SCAMP3-201ENST00000302631 SYTL4Q96C24 671 aaPredicted RBP26.3■■□□□ 1.8
SCAMP3-201ENST00000302631 THUMPD2Q9BTF0 503 aaKnown RBP26.3■■□□□ 1.8
SCAMP3-201ENST00000302631 TEFQ10587 303 aa26.29■■□□□ 1.8
SCAMP3-201ENST00000302631 RGPD3A6NKT7 1758 aaPredicted RBP26.29■■□□□ 1.8
SCAMP3-201ENST00000302631 RGPD4Q7Z3J3 1758 aa26.29■■□□□ 1.8
SCAMP3-201ENST00000302631 TAF7Q15545 349 aaPredicted RBP26.27■■□□□ 1.8
SCAMP3-201ENST00000302631 ZNF521Q96K83 1311 aa26.27■■□□□ 1.8
SCAMP3-201ENST00000302631 LY75O60449 1722 aa26.27■■□□□ 1.8
SCAMP3-201ENST00000302631 PLSCR1O15162 318 aa26.26■■□□□ 1.79
SCAMP3-201ENST00000302631 KDM3BQ7LBC6 1761 aa26.25■■□□□ 1.79
SCAMP3-201ENST00000302631 SENP3-EIF4A1A0A087X0R7 540 aa26.25■■□□□ 1.79
SCAMP3-201ENST00000302631 ATG3Q9NT62 314 aa26.25■■□□□ 1.79
SCAMP3-201ENST00000302631 BABAM1Q9NWV8 329 aa26.25■■□□□ 1.79
SCAMP3-201ENST00000302631 UBR2Q8IWV8 1755 aa26.25■■□□□ 1.79
SCAMP3-201ENST00000302631 WDR63Q8IWG1 891 aa26.23■■□□□ 1.79
SCAMP3-201ENST00000302631 ASAP1Q9ULH1 1129 aa26.23■■□□□ 1.79
SCAMP3-201ENST00000302631 APBA3O96018 575 aa26.22■■□□□ 1.79
SCAMP3-201ENST00000302631 ZNF853P0CG23 659 aa26.22■■□□□ 1.79
SCAMP3-201ENST00000302631 CALD1Q05682 793 aaKnown RBP26.22■■□□□ 1.79
SCAMP3-201ENST00000302631 SMARCC1Q92922 1105 aaPredicted RBP26.22■■□□□ 1.79
SCAMP3-201ENST00000302631 IL16Q14005 1332 aa26.22■■□□□ 1.79
SCAMP3-201ENST00000302631 SALL2Q9Y467 1007 aaPredicted RBP26.22■■□□□ 1.79
SCAMP3-201ENST00000302631 ZNF831Q5JPB2 1677 aa26.21■■□□□ 1.79
SCAMP3-201ENST00000302631 BTBD11A6QL63 1104 aa26.21■■□□□ 1.79
SCAMP3-201ENST00000302631 CHL1O00533 1208 aa26.21■■□□□ 1.79
SCAMP3-201ENST00000302631 SF3B2Q13435 895 aaKnown RBP26.2■■□□□ 1.78
SCAMP3-201ENST00000302631 ZNF790Q6PG37 636 aa26.2■■□□□ 1.78
SCAMP3-201ENST00000302631 CFAP44Q96MT7 982 aa26.2■■□□□ 1.78
SCAMP3-201ENST00000302631 PALLDQ8WX93 1383 aa26.19■■□□□ 1.78
SCAMP3-201ENST00000302631 KCPQ6ZWJ8 1503 aa26.19■■□□□ 1.78
SCAMP3-201ENST00000302631 SLC39A6Q13433 755 aa26.19■■□□□ 1.78
SCAMP3-201ENST00000302631 IFT57Q9NWB7 429 aa26.19■■□□□ 1.78
SCAMP3-201ENST00000302631 CAMKK2Q96RR4 588 aa26.18■■□□□ 1.78
SCAMP3-201ENST00000302631 CICQ96RK0 1608 aaPredicted RBP26.18■■□□□ 1.78
SCAMP3-201ENST00000302631 BAG6P46379 1132 aa26.17■■□□□ 1.78
SCAMP3-201ENST00000302631 KCNQ3O43525 872 aa26.16■■□□□ 1.78
SCAMP3-201ENST00000302631 GNAI1P63096 354 aa26.16■■□□□ 1.78
SCAMP3-201ENST00000302631 HNRNPUQ00839 825 aaKnown RBP eCLIP26.16■■□□□ 1.78
SCAMP3-201ENST00000302631 PROM2Q8N271 834 aa26.16■■□□□ 1.78
SCAMP3-201ENST00000302631 MIS18AQ9NYP9 233 aa26.16■■□□□ 1.78
SCAMP3-201ENST00000302631 RREB1Q92766 1687 aa26.15■■□□□ 1.78
SCAMP3-201ENST00000302631 EN1Q05925 392 aaPredicted RBP26.14■■□□□ 1.77
SCAMP3-201ENST00000302631 DEFB132Q7Z7B7 95 aa26.14■■□□□ 1.77
SCAMP3-201ENST00000302631 SLC4A9Q96Q91 983 aa26.14■■□□□ 1.77
SCAMP3-201ENST00000302631 HEG1Q9ULI3 1381 aa26.13■■□□□ 1.77
SCAMP3-201ENST00000302631 TAF1LQ8IZX4 1826 aa26.13■■□□□ 1.77
SCAMP3-201ENST00000302631 TTC5Q8N0Z6 440 aa26.13■■□□□ 1.77
SCAMP3-201ENST00000302631 TSPYL4Q9UJ04 414 aa26.13■■□□□ 1.77
SCAMP3-201ENST00000302631 LOC102724428A0A0B4J2F2 783 aa26.12■■□□□ 1.77
SCAMP3-201ENST00000302631 SIK1P57059 783 aa26.12■■□□□ 1.77
SCAMP3-201ENST00000302631 EIF4A1P60842 406 aaKnown RBP26.12■■□□□ 1.77
SCAMP3-201ENST00000302631 TXNRD1Q16881 649 aa26.12■■□□□ 1.77
SCAMP3-201ENST00000302631 SLC27A3Q5K4L6 730 aa26.12■■□□□ 1.77
SCAMP3-201ENST00000302631 VSIG10Q8N0Z9 540 aa26.12■■□□□ 1.77
SCAMP3-201ENST00000302631 ZNF496Q96IT1 587 aaPredicted RBP26.12■■□□□ 1.77
SCAMP3-201ENST00000302631 SPINK5Q9NQ38 1064 aaPredicted RBP26.12■■□□□ 1.77
SCAMP3-201ENST00000302631 MBIPQ9NS73 344 aa26.12■■□□□ 1.77
SCAMP3-201ENST00000302631 EZH2Q15910 746 aaKnown RBP26.11■■□□□ 1.77
SCAMP3-201ENST00000302631 ZBED9Q6R2W3 1325 aa26.1■■□□□ 1.77
SCAMP3-201ENST00000302631 TJP1Q07157 1748 aa26.1■■□□□ 1.77
SCAMP3-201ENST00000302631 SOCS7O14512 581 aa26.1■■□□□ 1.77
SCAMP3-201ENST00000302631 GOLGA2Q08379 1002 aa26.1■■□□□ 1.77
SCAMP3-201ENST00000302631 FMNL2Q96PY5 1086 aa26.1■■□□□ 1.77
SCAMP3-201ENST00000302631 PTCD1O75127 700 aaKnown RBP26.09■■□□□ 1.77
SCAMP3-201ENST00000302631 LRRC4BQ9NT99 713 aa26.09■■□□□ 1.77
SCAMP3-201ENST00000302631 LAS1LQ9Y4W2 734 aaKnown RBP26.09■■□□□ 1.77
SCAMP3-201ENST00000302631 COL5A3P25940 1745 aaPredicted RBP26.08■■□□□ 1.77
SCAMP3-201ENST00000302631 NUP188Q5SRE5 1749 aa26.08■■□□□ 1.76
SCAMP3-201ENST00000302631 TRMT2AQ8IZ69 625 aaKnown RBP26.07■■□□□ 1.76
SCAMP3-201ENST00000302631 RBM42Q9BTD8 480 aaKnown RBP26.07■■□□□ 1.76
SCAMP3-201ENST00000302631 CCNL1Q9UK58 526 aaPredicted RBP26.07■■□□□ 1.76
SCAMP3-201ENST00000302631 C5P01031 1676 aa26.06■■□□□ 1.76
SCAMP3-201ENST00000302631 SLFN5Q08AF3 891 aa26.06■■□□□ 1.76
SCAMP3-201ENST00000302631 E9PSI1 815 aa26.05■■□□□ 1.76
SCAMP3-201ENST00000302631 ATP6V1AP38606 617 aa26.05■■□□□ 1.76
SCAMP3-201ENST00000302631 ITPK1Q13572 414 aa26.05■■□□□ 1.76
SCAMP3-201ENST00000302631 GIGYF1O75420 1035 aaPredicted RBP26.04■■□□□ 1.76
SCAMP3-201ENST00000302631 HMGB2P26583 209 aaKnown RBP26.04■■□□□ 1.76
SCAMP3-201ENST00000302631 TSR2Q969E8 191 aaKnown RBP26.04■■□□□ 1.76
SCAMP3-201ENST00000302631 MYH16Q9H6N6 1097 aa26.04■■□□□ 1.76
SCAMP3-201ENST00000302631 FANCIQ9NVI1 1328 aa26.04■■□□□ 1.76
SCAMP3-201ENST00000302631 LAMB4A4D0S4 1761 aa26.03■■□□□ 1.76
SCAMP3-201ENST00000302631 SNRPA1P09661 255 aaKnown RBP26.03■■□□□ 1.76
SCAMP3-201ENST00000302631 CDCA7LQ96GN5 454 aa26.03■■□□□ 1.76
SCAMP3-201ENST00000302631 TEX13AQ9BXU3 409 aaPredicted RBP26.03■■□□□ 1.76
SCAMP3-201ENST00000302631 MYH14Q7Z406 1995 aaKnown RBP26.02■■□□□ 1.76
SCAMP3-201ENST00000302631 KCNQ4P56696 695 aa26.02■■□□□ 1.76
SCAMP3-201ENST00000302631 DNAJC10Q8IXB1 793 aa26.01■■□□□ 1.75
SCAMP3-201ENST00000302631 C4BP0C0L5 1744 aa26■■□□□ 1.75
SCAMP3-201ENST00000302631 HOXB7P09629 217 aa26■■□□□ 1.75
SCAMP3-201ENST00000302631 LINC00116Q8NCU8 138 aa26■■□□□ 1.75
SCAMP3-201ENST00000302631 PRAMEF22A3QJZ6 481 aa25.99■■□□□ 1.75
SCAMP3-201ENST00000302631 SOS1Q07889 1333 aaPredicted RBP25.98■■□□□ 1.75
SCAMP3-201ENST00000302631 CYP19A1P11511 503 aaPredicted RBP25.98■■□□□ 1.75
SCAMP3-201ENST00000302631 KRT24Q2M2I5 525 aa25.98■■□□□ 1.75
SCAMP3-201ENST00000302631 RC3H1Q5TC82 1133 aaKnown RBP25.98■■□□□ 1.75
SCAMP3-201ENST00000302631 DUSP27Q5VZP5 1158 aa25.98■■□□□ 1.75
SCAMP3-201ENST00000302631 USP16Q9Y5T5 823 aa25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms