RNA–Protein interactions for RNA: ENST00000302273.2

VPREB1-201, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene VPREB1, Length 626 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-201ENST00000302273 MRC1P22897 1456 aa11.57□□□□□ -0.56
VPREB1-201ENST00000302273 ACSBG1Q96GR2 724 aa11.56□□□□□ -0.56
VPREB1-201ENST00000302273 TEX13AQ9BXU3 409 aaPredicted RBP11.56□□□□□ -0.56
VPREB1-201ENST00000302273 ADAMTS7Q9UKP4 1686 aa11.55□□□□□ -0.56
VPREB1-201ENST00000302273 BTBD11A6QL63 1104 aa11.55□□□□□ -0.56
VPREB1-201ENST00000302273 CHL1O00533 1208 aa11.55□□□□□ -0.56
VPREB1-201ENST00000302273 GNAI1P63096 354 aa11.55□□□□□ -0.56
VPREB1-201ENST00000302273 NEUROD2Q15784 382 aa11.55□□□□□ -0.56
VPREB1-201ENST00000302273 ZNF790Q6PG37 636 aa11.55□□□□□ -0.56
VPREB1-201ENST00000302273 MCM10Q7L590 875 aa11.55□□□□□ -0.56
VPREB1-201ENST00000302273 TTC5Q8N0Z6 440 aa11.55□□□□□ -0.56
VPREB1-201ENST00000302273 ATG3Q9NT62 314 aa11.55□□□□□ -0.56
VPREB1-201ENST00000302273 IFT57Q9NWB7 429 aa11.55□□□□□ -0.56
VPREB1-201ENST00000302273 SOS1Q07889 1333 aaPredicted RBP11.55□□□□□ -0.56
VPREB1-201ENST00000302273 DEFB132Q7Z7B7 95 aa11.54□□□□□ -0.56
VPREB1-201ENST00000302273 CAMKK2Q96RR4 588 aa11.54□□□□□ -0.56
VPREB1-201ENST00000302273 SHANK3Q9BYB0 1731 aa11.54□□□□□ -0.56
VPREB1-201ENST00000302273 ZNF853P0CG23 659 aa11.53□□□□□ -0.56
VPREB1-201ENST00000302273 RRP7AQ9Y3A4 280 aaKnown RBP11.53□□□□□ -0.56
VPREB1-201ENST00000302273 ZNF521Q96K83 1311 aa11.53□□□□□ -0.56
VPREB1-201ENST00000302273 PALLDQ8WX93 1383 aa11.53□□□□□ -0.56
VPREB1-201ENST00000302273 LOC102724428A0A0B4J2F2 783 aa11.52□□□□□ -0.57
VPREB1-201ENST00000302273 SIK1P57059 783 aa11.52□□□□□ -0.57
VPREB1-201ENST00000302273 DCTN1Q14203 1278 aa11.52□□□□□ -0.57
VPREB1-201ENST00000302273 TXNRD1Q16881 649 aa11.52□□□□□ -0.57
VPREB1-201ENST00000302273 FMNL2Q96PY5 1086 aa11.52□□□□□ -0.57
VPREB1-201ENST00000302273 MYH16Q9H6N6 1097 aa11.52□□□□□ -0.57
VPREB1-201ENST00000302273 ASAP1Q9ULH1 1129 aa11.52□□□□□ -0.57
VPREB1-201ENST00000302273 NHSQ6T4R5 1651 aa11.52□□□□□ -0.57
VPREB1-201ENST00000302273 HOXB7P09629 217 aa11.51□□□□□ -0.57
VPREB1-201ENST00000302273 GOLGA2Q08379 1002 aa11.51□□□□□ -0.57
VPREB1-201ENST00000302273 E9PSI1 815 aa11.5□□□□□ -0.57
VPREB1-201ENST00000302273 SNRPA1P09661 255 aaKnown RBP11.5□□□□□ -0.57
VPREB1-201ENST00000302273 RC3H1Q5TC82 1133 aaKnown RBP11.5□□□□□ -0.57
VPREB1-201ENST00000302273 NBPF14Q5TI25 921 aa11.5□□□□□ -0.57
VPREB1-201ENST00000302273 PTF1AQ7RTS3 328 aa11.5□□□□□ -0.57
VPREB1-201ENST00000302273 TSPYL4Q9UJ04 414 aa11.5□□□□□ -0.57
VPREB1-201ENST00000302273 CCNL1Q9UK58 526 aaPredicted RBP11.5□□□□□ -0.57
VPREB1-201ENST00000302273 HEG1Q9ULI3 1381 aa11.5□□□□□ -0.57
VPREB1-201ENST00000302273 STARD3NLO95772 234 aa11.49□□□□□ -0.57
VPREB1-201ENST00000302273 ATP6V1AP38606 617 aa11.49□□□□□ -0.57
VPREB1-201ENST00000302273 EIF4A1P60842 406 aaKnown RBP11.49□□□□□ -0.57
VPREB1-201ENST00000302273 PROM2Q8N271 834 aa11.49□□□□□ -0.57
VPREB1-201ENST00000302273 SCN11AQ9UI33 1791 aa11.49□□□□□ -0.57
VPREB1-201ENST00000302273 GIGYF1O75420 1035 aaPredicted RBP11.48□□□□□ -0.57
VPREB1-201ENST00000302273 EN1Q05925 392 aaPredicted RBP11.48□□□□□ -0.57
VPREB1-201ENST00000302273 FLAD1Q8NFF5 587 aa11.48□□□□□ -0.57
VPREB1-201ENST00000302273 ZNF428Q96B54 188 aa11.48□□□□□ -0.57
VPREB1-201ENST00000302273 ZNF496Q96IT1 587 aaPredicted RBP11.48□□□□□ -0.57
VPREB1-201ENST00000302273 THUMPD2Q9BTF0 503 aaKnown RBP11.48□□□□□ -0.57
VPREB1-201ENST00000302273 ZBED9Q6R2W3 1325 aa11.48□□□□□ -0.57
VPREB1-201ENST00000302273 RGPD3A6NKT7 1758 aaPredicted RBP11.48□□□□□ -0.57
VPREB1-201ENST00000302273 RGPD4Q7Z3J3 1758 aa11.48□□□□□ -0.57
VPREB1-201ENST00000302273 ERBB4Q15303 1308 aa11.47□□□□□ -0.57
VPREB1-201ENST00000302273 PTCD1O75127 700 aaKnown RBP11.47□□□□□ -0.57
VPREB1-201ENST00000302273 CT47B1P0C2W7 299 aaPredicted RBP11.47□□□□□ -0.57
VPREB1-201ENST00000302273 HNRNPUQ00839 825 aaKnown RBP eCLIP11.47□□□□□ -0.57
VPREB1-201ENST00000302273 SLC39A6Q13433 755 aa11.47□□□□□ -0.57
VPREB1-201ENST00000302273 MBIPQ9NS73 344 aa11.47□□□□□ -0.57
VPREB1-201ENST00000302273 ZNF831Q5JPB2 1677 aa11.46□□□□□ -0.57
VPREB1-201ENST00000302273 CNTNAP4Q9C0A0 1308 aa11.46□□□□□ -0.57
VPREB1-201ENST00000302273 ADRA2BP18089 450 aa11.46□□□□□ -0.57
VPREB1-201ENST00000302273 EZH2Q15910 746 aaKnown RBP11.46□□□□□ -0.57
VPREB1-201ENST00000302273 TRMT2AQ8IZ69 625 aaKnown RBP11.46□□□□□ -0.57
VPREB1-201ENST00000302273 YTHDC1Q96MU7 727 aaKnown RBP11.46□□□□□ -0.57
VPREB1-201ENST00000302273 RBM42Q9BTD8 480 aaKnown RBP11.46□□□□□ -0.57
VPREB1-201ENST00000302273 SBF2Q86WG5 1849 aa11.46□□□□□ -0.58
VPREB1-201ENST00000302273 DOT1LQ8TEK3 1739 aa11.46□□□□□ -0.58
VPREB1-201ENST00000302273 RGL2O15211 777 aa11.45□□□□□ -0.58
VPREB1-201ENST00000302273 SLFN5Q08AF3 891 aa11.45□□□□□ -0.58
VPREB1-201ENST00000302273 LRRC4BQ9NT99 713 aa11.45□□□□□ -0.58
VPREB1-201ENST00000302273 TOGARAM1Q9Y4F4 1720 aa11.45□□□□□ -0.58
VPREB1-201ENST00000302273 CYP19A1P11511 503 aaPredicted RBP11.44□□□□□ -0.58
VPREB1-201ENST00000302273 SLC4A9Q96Q91 983 aa11.44□□□□□ -0.58
VPREB1-201ENST00000302273 STK32BQ9NY57 414 aa11.44□□□□□ -0.58
VPREB1-201ENST00000302273 MIS18AQ9NYP9 233 aa11.44□□□□□ -0.58
VPREB1-201ENST00000302273 LAS1LQ9Y4W2 734 aaKnown RBP11.44□□□□□ -0.58
VPREB1-201ENST00000302273 KCNQ3O43525 872 aa11.43□□□□□ -0.58
VPREB1-201ENST00000302273 SSFA2P28290 1259 aa11.43□□□□□ -0.58
VPREB1-201ENST00000302273 ITPK1Q13572 414 aa11.43□□□□□ -0.58
VPREB1-201ENST00000302273 SLC15A2Q16348 729 aa11.43□□□□□ -0.58
VPREB1-201ENST00000302273 AKT1S1Q96B36 256 aa11.43□□□□□ -0.58
VPREB1-201ENST00000302273 SALL2Q9Y467 1007 aaPredicted RBP11.43□□□□□ -0.58
VPREB1-201ENST00000302273 KCPQ6ZWJ8 1503 aa11.43□□□□□ -0.58
VPREB1-201ENST00000302273 TNS1Q9HBL0 1735 aaKnown RBP11.43□□□□□ -0.58
VPREB1-201ENST00000302273 BTAF1O14981 1849 aa11.42□□□□□ -0.58
VPREB1-201ENST00000302273 FANCIQ9NVI1 1328 aa11.42□□□□□ -0.58
VPREB1-201ENST00000302273 A0A087WZG4 1122 aa11.42□□□□□ -0.58
VPREB1-201ENST00000302273 RPS6KA4O75676 772 aa11.42□□□□□ -0.58
VPREB1-201ENST00000302273 IL6STP40189 918 aaPredicted RBP11.42□□□□□ -0.58
VPREB1-201ENST00000302273 NPM2Q86SE8 214 aaKnown RBP11.42□□□□□ -0.58
VPREB1-201ENST00000302273 DNAJC10Q8IXB1 793 aa11.42□□□□□ -0.58
VPREB1-201ENST00000302273 SLC16A10Q8TF71 515 aa11.42□□□□□ -0.58
VPREB1-201ENST00000302273 AK7Q96M32 723 aa11.42□□□□□ -0.58
VPREB1-201ENST00000302273 CCDC87Q9NVE4 849 aa11.42□□□□□ -0.58
VPREB1-201ENST00000302273 DBF4Q9UBU7 674 aaPredicted RBP11.42□□□□□ -0.58
VPREB1-201ENST00000302273 RTCBQ9Y3I0 505 aaKnown RBP11.42□□□□□ -0.58
VPREB1-201ENST00000302273 CICQ96RK0 1608 aaPredicted RBP11.42□□□□□ -0.58
VPREB1-201ENST00000302273 ITGB4P16144 1822 aa11.42□□□□□ -0.58
VPREB1-201ENST00000302273 KAT6BQ8WYB5 2073 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms