RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 DEKP35659 375 aaKnown RBP18.15■□□□□ 0.5
SMG8-201ENST00000300917 EIF4A1P60842 406 aaKnown RBP18.15■□□□□ 0.5
SMG8-201ENST00000300917 CCT4P50991 539 aaKnown RBP18.15■□□□□ 0.5
SMG8-201ENST00000300917 AKAP4Q5JQC9 854 aa18.15■□□□□ 0.5
SMG8-201ENST00000300917 LRRFIP2Q9Y608 721 aaKnown RBP18.14■□□□□ 0.49
SMG8-201ENST00000300917 BECN1Q14457 450 aa18.14■□□□□ 0.49
SMG8-201ENST00000300917 RAPGEF4Q8WZA2 1011 aa18.14■□□□□ 0.49
SMG8-201ENST00000300917 TBC1D2Q9BYX2 928 aa18.14■□□□□ 0.49
SMG8-201ENST00000300917 RNMTO43148 476 aaKnown RBP18.13■□□□□ 0.49
SMG8-201ENST00000300917 GSPT1P15170 499 aaKnown RBP18.13■□□□□ 0.49
SMG8-201ENST00000300917 NFKBIBQ15653 356 aa18.13■□□□□ 0.49
SMG8-201ENST00000300917 PLEKHM2Q8IWE5 1019 aa18.13■□□□□ 0.49
SMG8-201ENST00000300917 RPAP2Q8IXW5 612 aaPredicted RBP18.13■□□□□ 0.49
SMG8-201ENST00000300917 PXDNQ92626 1479 aa18.13■□□□□ 0.49
SMG8-201ENST00000300917 ATP10DQ9P241 1426 aa18.13■□□□□ 0.49
SMG8-201ENST00000300917 PNMA6EA0A0J9YXQ4 647 aa18.13■□□□□ 0.49
SMG8-201ENST00000300917 TBC1D9Q6ZT07 1266 aa18.13■□□□□ 0.49
SMG8-201ENST00000300917 RGPD2P0DJD1 1756 aa18.13■□□□□ 0.49
SMG8-201ENST00000300917 GNAI2P04899 355 aa18.13■□□□□ 0.49
SMG8-201ENST00000300917 AIMP1Q12904 312 aaKnown RBP18.13■□□□□ 0.49
SMG8-201ENST00000300917 PIP4K2AP48426 406 aaPredicted RBP18.12■□□□□ 0.49
SMG8-201ENST00000300917 PI4KAP2A4QPH2 592 aa18.12■□□□□ 0.49
SMG8-201ENST00000300917 BMP2KLQ5H9B9 411 aa18.12■□□□□ 0.49
SMG8-201ENST00000300917 PI4KAP1Q8N8J0 262 aa18.12■□□□□ 0.49
SMG8-201ENST00000300917 ERBB3P21860 1342 aa18.12■□□□□ 0.49
SMG8-201ENST00000300917 PROSER3Q2NL68 480 aa18.11■□□□□ 0.49
SMG8-201ENST00000300917 FRAT2O75474 233 aaPredicted RBP18.11■□□□□ 0.49
SMG8-201ENST00000300917 CADPS2Q86UW7 1296 aa18.11■□□□□ 0.49
SMG8-201ENST00000300917 AMOTQ4VCS5 1084 aa18.1■□□□□ 0.49
SMG8-201ENST00000300917 ZNF335Q9H4Z2 1342 aaPredicted RBP18.1■□□□□ 0.49
SMG8-201ENST00000300917 HMMRO75330 724 aa18.09■□□□□ 0.49
SMG8-201ENST00000300917 FOXD4L1Q9NU39 408 aa18.09■□□□□ 0.49
SMG8-201ENST00000300917 CEMIPQ8WUJ3 1361 aa18.09■□□□□ 0.49
SMG8-201ENST00000300917 MST1RQ04912 1400 aa18.09■□□□□ 0.49
SMG8-201ENST00000300917 UBTFL1P0CB47 393 aaPredicted RBP18.09■□□□□ 0.49
SMG8-201ENST00000300917 USP44Q9H0E7 712 aa18.09■□□□□ 0.49
SMG8-201ENST00000300917 RBM42Q9BTD8 480 aaKnown RBP18.08■□□□□ 0.49
SMG8-201ENST00000300917 IL1RAPL2Q9NP60 686 aa18.08■□□□□ 0.49
SMG8-201ENST00000300917 NFATC2IPQ8NCF5 419 aa18.08■□□□□ 0.48
SMG8-201ENST00000300917 NPHP3Q7Z494 1330 aa18.08■□□□□ 0.48
SMG8-201ENST00000300917 NBPF7P0C2Y1 421 aaPredicted RBP18.08■□□□□ 0.48
SMG8-201ENST00000300917 USP35Q9P2H5 1018 aa18.07■□□□□ 0.48
SMG8-201ENST00000300917 MYL6BP14649 208 aa18.07■□□□□ 0.48
SMG8-201ENST00000300917 SRCIN1Q9C0H9 1055 aa18.06■□□□□ 0.48
SMG8-201ENST00000300917 GNAI3P08754 354 aa18.06■□□□□ 0.48
SMG8-201ENST00000300917 TATP17735 454 aaPredicted RBP18.06■□□□□ 0.48
SMG8-201ENST00000300917 TTC22Q5TAA0 569 aa18.06■□□□□ 0.48
SMG8-201ENST00000300917 BRINP3Q76B58 766 aa18.05■□□□□ 0.48
SMG8-201ENST00000300917 CDC45O75419 566 aa18.04■□□□□ 0.48
SMG8-201ENST00000300917 SDSP20132 328 aa18.04■□□□□ 0.48
SMG8-201ENST00000300917 CWF19L2Q2TBE0 894 aaKnown RBP18.04■□□□□ 0.48
SMG8-201ENST00000300917 PRDM11Q9NQV5 511 aa18.04■□□□□ 0.48
SMG8-201ENST00000300917 STRN4Q9NRL3 753 aa18.04■□□□□ 0.48
SMG8-201ENST00000300917 DNAAF4Q8WXU2 420 aa18.04■□□□□ 0.48
SMG8-201ENST00000300917 KDM4FA0A1W2PPD8 638 aa18.04■□□□□ 0.48
SMG8-201ENST00000300917 GIGYF1O75420 1035 aaPredicted RBP18.04■□□□□ 0.48
SMG8-201ENST00000300917 MAP3K2Q9Y2U5 619 aa18.03■□□□□ 0.48
SMG8-201ENST00000300917 VIRMAQ69YN4 1812 aaKnown RBP18.03■□□□□ 0.48
SMG8-201ENST00000300917 SURF6O75683 361 aaKnown RBP18.03■□□□□ 0.48
SMG8-201ENST00000300917 PPP1R42Q7Z4L9 355 aa18.03■□□□□ 0.48
SMG8-201ENST00000300917 MAP4K4O95819 1239 aaPredicted RBP18.02■□□□□ 0.48
SMG8-201ENST00000300917 NUTM1Q86Y26 1132 aa18.02■□□□□ 0.48
SMG8-201ENST00000300917 JARID2Q92833 1246 aaPredicted RBP18.02■□□□□ 0.48
SMG8-201ENST00000300917 SRGAP3O43295 1099 aa18.02■□□□□ 0.47
SMG8-201ENST00000300917 BABAM1Q9NWV8 329 aa18.02■□□□□ 0.47
SMG8-201ENST00000300917 ATP8B2P98198 1209 aa18.01■□□□□ 0.47
SMG8-201ENST00000300917 TOM1L2Q6ZVM7 507 aa18.01■□□□□ 0.47
SMG8-201ENST00000300917 HSCBQ8IWL3 235 aa18.01■□□□□ 0.47
SMG8-201ENST00000300917 RILPL2Q969X0 211 aa18.01■□□□□ 0.47
SMG8-201ENST00000300917 MED1Q15648 1581 aaPredicted RBP18.01■□□□□ 0.47
SMG8-201ENST00000300917 TRIM6-TRIM34B2RNG4 842 aa18.01■□□□□ 0.47
SMG8-201ENST00000300917 LRRCC1Q9C099 1032 aa18.01■□□□□ 0.47
SMG8-201ENST00000300917 DBF4Q9UBU7 674 aaPredicted RBP18.01■□□□□ 0.47
SMG8-201ENST00000300917 STRCP1A6NGW2 1772 aa18.01■□□□□ 0.47
SMG8-201ENST00000300917 SPATA31A3Q5VYP0 1347 aa18■□□□□ 0.47
SMG8-201ENST00000300917 CD2BP2O95400 341 aaKnown RBP18■□□□□ 0.47
SMG8-201ENST00000300917 C9orf78Q9NZ63 289 aaPredicted RBP18■□□□□ 0.47
SMG8-201ENST00000300917 SLAIN2Q9P270 581 aa18■□□□□ 0.47
SMG8-201ENST00000300917 SLIT3O75094 1523 aa18■□□□□ 0.47
SMG8-201ENST00000300917 CYP27B1O15528 508 aa18■□□□□ 0.47
SMG8-201ENST00000300917 PHKG2P15735 406 aa18■□□□□ 0.47
SMG8-201ENST00000300917 PDE1AP54750 535 aa18■□□□□ 0.47
SMG8-201ENST00000300917 RGPD5Q99666 1765 aa18■□□□□ 0.47
SMG8-201ENST00000300917 EIF5BO60841 1220 aaKnown RBP17.99■□□□□ 0.47
SMG8-201ENST00000300917 SPG7Q9UQ90 795 aa17.99■□□□□ 0.47
SMG8-201ENST00000300917 BEND3Q5T5X7 828 aa17.99■□□□□ 0.47
SMG8-201ENST00000300917 ZNF790Q6PG37 636 aa17.99■□□□□ 0.47
SMG8-201ENST00000300917 DDX54Q8TDD1 881 aaKnown RBP17.99■□□□□ 0.47
SMG8-201ENST00000300917 ZNF496Q96IT1 587 aaPredicted RBP17.99■□□□□ 0.47
SMG8-201ENST00000300917 OS9Q13438 667 aaPredicted RBP17.99■□□□□ 0.47
SMG8-201ENST00000300917 LRRC37A3O60309 1634 aa17.98■□□□□ 0.47
SMG8-201ENST00000300917 MEGF6O75095 1541 aa17.98■□□□□ 0.47
SMG8-201ENST00000300917 HSP90AA1P07900 732 aaKnown RBP17.97■□□□□ 0.47
SMG8-201ENST00000300917 SLC52A2Q9HAB3 445 aa17.97■□□□□ 0.47
SMG8-201ENST00000300917 HSP90AB1P08238 724 aaKnown RBP17.97■□□□□ 0.47
SMG8-201ENST00000300917 IFNL2Q8IZJ0 200 aa17.97■□□□□ 0.47
SMG8-201ENST00000300917 USP16Q9Y5T5 823 aa17.97■□□□□ 0.47
SMG8-201ENST00000300917 ADCY9O60503 1353 aa17.97■□□□□ 0.47
SMG8-201ENST00000300917 USP54Q70EL1 1684 aa17.97■□□□□ 0.47
SMG8-201ENST00000300917 PA2G4Q9UQ80 394 aaKnown RBP17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms