RNA–Protein interactions for RNA: ENST00000300658.8

PGAP3-201, Transcript of post-GPI attachment to proteins 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGAP3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-201ENST00000300658 RPAP2Q8IXW5 612 aaPredicted RBP20.65■□□□□ 0.9
PGAP3-201ENST00000300658 FAM43AQ8N2R8 423 aa20.65■□□□□ 0.9
PGAP3-201ENST00000300658 C22orf23Q9BZE7 217 aa20.65■□□□□ 0.9
PGAP3-201ENST00000300658 ZNF530Q6P9A1 599 aaPredicted RBP20.64■□□□□ 0.9
PGAP3-201ENST00000300658 BABAM1Q9NWV8 329 aa20.64■□□□□ 0.9
PGAP3-201ENST00000300658 STRCP1A6NGW2 1772 aa20.64■□□□□ 0.89
PGAP3-201ENST00000300658 FKBP5Q13451 457 aaPredicted RBP20.64■□□□□ 0.89
PGAP3-201ENST00000300658 OTUD7AQ8TE49 926 aaPredicted RBP20.63■□□□□ 0.89
PGAP3-201ENST00000300658 PLEKHM2Q8IWE5 1019 aa20.63■□□□□ 0.89
PGAP3-201ENST00000300658 PHAXQ9H814 394 aaKnown RBP20.63■□□□□ 0.89
PGAP3-201ENST00000300658 SMARCA5O60264 1052 aaPredicted RBP20.62■□□□□ 0.89
PGAP3-201ENST00000300658 EIF4A1P60842 406 aaKnown RBP20.62■□□□□ 0.89
PGAP3-201ENST00000300658 APBB1O00213 710 aa20.62■□□□□ 0.89
PGAP3-201ENST00000300658 CCT4P50991 539 aaKnown RBP20.62■□□□□ 0.89
PGAP3-201ENST00000300658 TBC1D2Q9BYX2 928 aa20.62■□□□□ 0.89
PGAP3-201ENST00000300658 PXDNQ92626 1479 aa20.62■□□□□ 0.89
PGAP3-201ENST00000300658 MST1RQ04912 1400 aa20.62■□□□□ 0.89
PGAP3-201ENST00000300658 GSPT1P15170 499 aaKnown RBP20.62■□□□□ 0.89
PGAP3-201ENST00000300658 ATF3P18847 181 aa20.62■□□□□ 0.89
PGAP3-201ENST00000300658 AKAP4Q5JQC9 854 aa20.62■□□□□ 0.89
PGAP3-201ENST00000300658 PLEKHO1Q53GL0 409 aaPredicted RBP20.61■□□□□ 0.89
PGAP3-201ENST00000300658 HDGFL1Q5TGJ6 251 aa20.61■□□□□ 0.89
PGAP3-201ENST00000300658 EIF2S2P20042 333 aaKnown RBP20.6■□□□□ 0.89
PGAP3-201ENST00000300658 NCAPD2Q15021 1401 aa20.6■□□□□ 0.89
PGAP3-201ENST00000300658 FAM208AQ9UK61 1670 aaKnown RBP20.6■□□□□ 0.89
PGAP3-201ENST00000300658 CABLES1Q8TDN4 633 aa20.59■□□□□ 0.89
PGAP3-201ENST00000300658 MED1Q15648 1581 aaPredicted RBP20.59■□□□□ 0.89
PGAP3-201ENST00000300658 RNMTO43148 476 aaKnown RBP20.58■□□□□ 0.89
PGAP3-201ENST00000300658 TBC1D9Q6ZT07 1266 aa20.58■□□□□ 0.89
PGAP3-201ENST00000300658 RGPD5Q99666 1765 aa20.58■□□□□ 0.88
PGAP3-201ENST00000300658 A0A0U1RQG5 324 aaPredicted RBP20.57■□□□□ 0.88
PGAP3-201ENST00000300658 BECN1Q14457 450 aa20.57■□□□□ 0.88
PGAP3-201ENST00000300658 BTBD11A6QL63 1104 aa20.57■□□□□ 0.88
PGAP3-201ENST00000300658 ANXA1P04083 346 aa20.57■□□□□ 0.88
PGAP3-201ENST00000300658 ERBB3P21860 1342 aa20.57■□□□□ 0.88
PGAP3-201ENST00000300658 TEFQ10587 303 aa20.56■□□□□ 0.88
PGAP3-201ENST00000300658 AMOTQ4VCS5 1084 aa20.56■□□□□ 0.88
PGAP3-201ENST00000300658 SOS1Q07889 1333 aaPredicted RBP20.56■□□□□ 0.88
PGAP3-201ENST00000300658 ALS2Q96Q42 1657 aa20.56■□□□□ 0.88
PGAP3-201ENST00000300658 GNAI2P04899 355 aa20.55■□□□□ 0.88
PGAP3-201ENST00000300658 SLKQ9H2G2 1235 aaPredicted RBP20.55■□□□□ 0.88
PGAP3-201ENST00000300658 CHPF2Q9P2E5 772 aa20.55■□□□□ 0.88
PGAP3-201ENST00000300658 KIF1AQ12756 1690 aa20.55■□□□□ 0.88
PGAP3-201ENST00000300658 PNMA6EA0A0J9YXQ4 647 aa20.55■□□□□ 0.88
PGAP3-201ENST00000300658 AEBP2Q6ZN18 517 aaPredicted RBP20.55■□□□□ 0.88
PGAP3-201ENST00000300658 USP44Q9H0E7 712 aa20.55■□□□□ 0.88
PGAP3-201ENST00000300658 LMO7Q8WWI1 1683 aa20.54■□□□□ 0.88
PGAP3-201ENST00000300658 C1orf141Q5JVX7 400 aa20.54■□□□□ 0.88
PGAP3-201ENST00000300658 PRAMEF22A3QJZ6 481 aa20.53■□□□□ 0.88
PGAP3-201ENST00000300658 RBM25P49756 843 aaKnown RBP20.53■□□□□ 0.88
PGAP3-201ENST00000300658 TTC22Q5TAA0 569 aa20.53■□□□□ 0.88
PGAP3-201ENST00000300658 ANTXR1Q9H6X2 564 aa20.53■□□□□ 0.88
PGAP3-201ENST00000300658 CACNA1FO60840 1977 aa20.53■□□□□ 0.88
PGAP3-201ENST00000300658 RRAGDQ9NQL2 400 aaPredicted RBP20.53■□□□□ 0.88
PGAP3-201ENST00000300658 EXOC6BQ9Y2D4 811 aa20.53■□□□□ 0.88
PGAP3-201ENST00000300658 CHRNA2Q15822 529 aa20.52■□□□□ 0.88
PGAP3-201ENST00000300658 KDM3BQ7LBC6 1761 aa20.52■□□□□ 0.88
PGAP3-201ENST00000300658 SPRYD3Q8NCJ5 442 aa20.52■□□□□ 0.88
PGAP3-201ENST00000300658 FRAT2O75474 233 aaPredicted RBP20.52■□□□□ 0.87
PGAP3-201ENST00000300658 LRRFIP2Q9Y608 721 aaKnown RBP20.52■□□□□ 0.87
PGAP3-201ENST00000300658 KIF2CQ99661 725 aa20.51■□□□□ 0.87
PGAP3-201ENST00000300658 PDE4CQ08493 712 aa20.51■□□□□ 0.87
PGAP3-201ENST00000300658 CADPS2Q86UW7 1296 aa20.51■□□□□ 0.87
PGAP3-201ENST00000300658 NLRP2Q9NX02 1062 aa20.51■□□□□ 0.87
PGAP3-201ENST00000300658 HMMRO75330 724 aa20.5■□□□□ 0.87
PGAP3-201ENST00000300658 GNAI3P08754 354 aa20.5■□□□□ 0.87
PGAP3-201ENST00000300658 ATP8B2P98198 1209 aa20.5■□□□□ 0.87
PGAP3-201ENST00000300658 CAMTA1Q9Y6Y1 1673 aa20.5■□□□□ 0.87
PGAP3-201ENST00000300658 PROSER3Q2NL68 480 aa20.49■□□□□ 0.87
PGAP3-201ENST00000300658 PI4KAP2A4QPH2 592 aa20.49■□□□□ 0.87
PGAP3-201ENST00000300658 HOXB7P09629 217 aa20.49■□□□□ 0.87
PGAP3-201ENST00000300658 PI4KAP1Q8N8J0 262 aa20.49■□□□□ 0.87
PGAP3-201ENST00000300658 DCCP43146 1447 aa20.49■□□□□ 0.87
PGAP3-201ENST00000300658 CDC45O75419 566 aa20.48■□□□□ 0.87
PGAP3-201ENST00000300658 GIGYF1O75420 1035 aaPredicted RBP20.48■□□□□ 0.87
PGAP3-201ENST00000300658 NPHP3Q7Z494 1330 aa20.48■□□□□ 0.87
PGAP3-201ENST00000300658 SDSP20132 328 aa20.48■□□□□ 0.87
PGAP3-201ENST00000300658 NCOA3Q9Y6Q9 1424 aa20.47■□□□□ 0.87
PGAP3-201ENST00000300658 TSHZ3Q63HK5 1081 aa20.47■□□□□ 0.87
PGAP3-201ENST00000300658 HEG1Q9ULI3 1381 aa20.47■□□□□ 0.87
PGAP3-201ENST00000300658 NBPF7P0C2Y1 421 aaPredicted RBP20.46■□□□□ 0.87
PGAP3-201ENST00000300658 BEND3Q5T5X7 828 aa20.46■□□□□ 0.87
PGAP3-201ENST00000300658 SPATA31A3Q5VYP0 1347 aa20.46■□□□□ 0.87
PGAP3-201ENST00000300658 SLC39A6Q13433 755 aa20.46■□□□□ 0.87
PGAP3-201ENST00000300658 UBTFL1P0CB47 393 aaPredicted RBP20.45■□□□□ 0.86
PGAP3-201ENST00000300658 RAPGEF4Q8WZA2 1011 aa20.45■□□□□ 0.86
PGAP3-201ENST00000300658 RBM42Q9BTD8 480 aaKnown RBP20.45■□□□□ 0.86
PGAP3-201ENST00000300658 SRCIN1Q9C0H9 1055 aa20.45■□□□□ 0.86
PGAP3-201ENST00000300658 COL18A1P39060 1754 aa20.45■□□□□ 0.86
PGAP3-201ENST00000300658 ADCY9O60503 1353 aa20.45■□□□□ 0.86
PGAP3-201ENST00000300658 HSP90AA2PQ14568 343 aaPredicted RBP20.45■□□□□ 0.86
PGAP3-201ENST00000300658 DNAAF4Q8WXU2 420 aa20.45■□□□□ 0.86
PGAP3-201ENST00000300658 PXDNLA1KZ92 1463 aa20.44■□□□□ 0.86
PGAP3-201ENST00000300658 PDE1AP54750 535 aa20.44■□□□□ 0.86
PGAP3-201ENST00000300658 TNS3Q68CZ2 1445 aa20.44■□□□□ 0.86
PGAP3-201ENST00000300658 BRINP3Q76B58 766 aa20.44■□□□□ 0.86
PGAP3-201ENST00000300658 MEGF6O75095 1541 aa20.44■□□□□ 0.86
PGAP3-201ENST00000300658 CD2BP2O95400 341 aaKnown RBP20.43■□□□□ 0.86
PGAP3-201ENST00000300658 SALL3Q9BXA9 1300 aa20.43■□□□□ 0.86
PGAP3-201ENST00000300658 CSB-PGBD3P0DP91 1061 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms