RNA–Protein interactions for RNA: ENST00000300227.12

CCDC178-201, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS P3 TSL 2 BASIC

Gene CCDC178, Length 3,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-201ENST00000300227 ARHGAP45Q92619 1136 aa17.61■□□□□ 0.41
CCDC178-201ENST00000300227 LRRC37A3O60309 1634 aa17.6■□□□□ 0.41
CCDC178-201ENST00000300227 HDGFL1Q5TGJ6 251 aa17.6■□□□□ 0.41
CCDC178-201ENST00000300227 API5Q9BZZ5 524 aaKnown RBP17.6■□□□□ 0.41
CCDC178-201ENST00000300227 DDX19BQ9UMR2 479 aa17.6■□□□□ 0.41
CCDC178-201ENST00000300227 CCDC30Q5VVM6 783 aa17.6■□□□□ 0.41
CCDC178-201ENST00000300227 PCDHB15Q9Y5E8 787 aa17.6■□□□□ 0.41
CCDC178-201ENST00000300227 CERKQ8TCT0 537 aa17.59■□□□□ 0.41
CCDC178-201ENST00000300227 DCAF5Q96JK2 942 aa17.59■□□□□ 0.41
CCDC178-201ENST00000300227 OVOS2A0A0G2JMS6 1433 aa17.59■□□□□ 0.41
CCDC178-201ENST00000300227 KDM6AO15550 1401 aaPredicted RBP17.59■□□□□ 0.41
CCDC178-201ENST00000300227 PHLPP1O60346 1717 aa17.59■□□□□ 0.41
CCDC178-201ENST00000300227 SLC52A2Q9HAB3 445 aa17.59■□□□□ 0.41
CCDC178-201ENST00000300227 IGHDP01880 384 aa17.58■□□□□ 0.41
CCDC178-201ENST00000300227 HSP90AB1P08238 724 aaKnown RBP17.57■□□□□ 0.4
CCDC178-201ENST00000300227 CENPQQ7L2Z9 268 aaPredicted RBP17.57■□□□□ 0.4
CCDC178-201ENST00000300227 PCDH11XQ9BZA7 1347 aa17.57■□□□□ 0.4
CCDC178-201ENST00000300227 PCDH11YQ9BZA8 1340 aa17.57■□□□□ 0.4
CCDC178-201ENST00000300227 COL16A1Q07092 1604 aaPredicted RBP17.57■□□□□ 0.4
CCDC178-201ENST00000300227 CABP4P57796 275 aa17.57■□□□□ 0.4
CCDC178-201ENST00000300227 KDM2BQ8NHM5 1336 aa17.56■□□□□ 0.4
CCDC178-201ENST00000300227 PRAMEF22A3QJZ6 481 aa17.56■□□□□ 0.4
CCDC178-201ENST00000300227 F6X3S4 739 aa17.56■□□□□ 0.4
CCDC178-201ENST00000300227 SLC4A10Q6U841 1118 aa17.56■□□□□ 0.4
CCDC178-201ENST00000300227 CCDC9Q9Y3X0 531 aaKnown RBP17.56■□□□□ 0.4
CCDC178-201ENST00000300227 ABCC4O15439 1325 aa17.55■□□□□ 0.4
CCDC178-201ENST00000300227 ZNF790Q6PG37 636 aa17.55■□□□□ 0.4
CCDC178-201ENST00000300227 ANXA1P04083 346 aa17.55■□□□□ 0.4
CCDC178-201ENST00000300227 FKBP5Q13451 457 aaPredicted RBP17.55■□□□□ 0.4
CCDC178-201ENST00000300227 TSHZ2Q9NRE2 1034 aa17.54■□□□□ 0.4
CCDC178-201ENST00000300227 FLIIQ13045 1269 aa17.54■□□□□ 0.4
CCDC178-201ENST00000300227 C1orf115Q9H7X2 142 aa17.54■□□□□ 0.4
CCDC178-201ENST00000300227 PTPRCP08575 1304 aa17.54■□□□□ 0.4
CCDC178-201ENST00000300227 AAMPQ13685 434 aa17.53■□□□□ 0.4
CCDC178-201ENST00000300227 ZBTB40Q9NUA8 1239 aa17.53■□□□□ 0.4
CCDC178-201ENST00000300227 CHPF2Q9P2E5 772 aa17.53■□□□□ 0.4
CCDC178-201ENST00000300227 GIGYF1O75420 1035 aaPredicted RBP17.53■□□□□ 0.4
CCDC178-201ENST00000300227 TTC5Q8N0Z6 440 aa17.53■□□□□ 0.4
CCDC178-201ENST00000300227 C8orf37Q96NL8 207 aa17.53■□□□□ 0.4
CCDC178-201ENST00000300227 PHAXQ9H814 394 aaKnown RBP17.53■□□□□ 0.4
CCDC178-201ENST00000300227 SOS1Q07889 1333 aaPredicted RBP17.52■□□□□ 0.4
CCDC178-201ENST00000300227 COL22A1Q8NFW1 1626 aaPredicted RBP17.52■□□□□ 0.4
CCDC178-201ENST00000300227 ZBTB7BO15156 539 aaPredicted RBP17.52■□□□□ 0.39
CCDC178-201ENST00000300227 ZNF496Q96IT1 587 aaPredicted RBP17.51■□□□□ 0.39
CCDC178-201ENST00000300227 HOXB7P09629 217 aa17.51■□□□□ 0.39
CCDC178-201ENST00000300227 NGLY1Q96IV0 654 aa17.51■□□□□ 0.39
CCDC178-201ENST00000300227 COL14A1Q05707 1796 aaKnown RBP17.5■□□□□ 0.39
CCDC178-201ENST00000300227 PLEKHG2Q9H7P9 1386 aa17.5■□□□□ 0.39
CCDC178-201ENST00000300227 RWDD1Q9H446 243 aaPredicted RBP17.5■□□□□ 0.39
CCDC178-201ENST00000300227 RGS12O14924 1447 aa17.5■□□□□ 0.39
CCDC178-201ENST00000300227 JCADQ9P266 1359 aa17.49■□□□□ 0.39
CCDC178-201ENST00000300227 RGS3P49796 1198 aa17.49■□□□□ 0.39
CCDC178-201ENST00000300227 EXOC5O00471 708 aa17.49■□□□□ 0.39
CCDC178-201ENST00000300227 INTS3Q68E01 1043 aaKnown RBP17.49■□□□□ 0.39
CCDC178-201ENST00000300227 PROSER3Q2NL68 480 aa17.48■□□□□ 0.39
CCDC178-201ENST00000300227 NKX1-1Q15270 411 aaPredicted RBP17.47■□□□□ 0.39
CCDC178-201ENST00000300227 CHMP4BQ9H444 224 aaKnown RBP17.47■□□□□ 0.39
CCDC178-201ENST00000300227 PKD1L3Q7Z443 1732 aa17.47■□□□□ 0.39
CCDC178-201ENST00000300227 A0A0G2JS52 829 aa17.47■□□□□ 0.39
CCDC178-201ENST00000300227 ERVV-2B6SEH9 535 aa17.47■□□□□ 0.39
CCDC178-201ENST00000300227 PTCD1O75127 700 aaKnown RBP17.47■□□□□ 0.39
CCDC178-201ENST00000300227 HSPA1LP34931 641 aa17.47■□□□□ 0.39
CCDC178-201ENST00000300227 CHMP4AQ9BY43 222 aa17.47■□□□□ 0.39
CCDC178-201ENST00000300227 DBF4Q9UBU7 674 aaPredicted RBP17.47■□□□□ 0.39
CCDC178-201ENST00000300227 FMNL2Q96PY5 1086 aa17.46■□□□□ 0.39
CCDC178-201ENST00000300227 SPATA31A1Q5TZJ5 1347 aa17.46■□□□□ 0.39
CCDC178-201ENST00000300227 PARP4Q9UKK3 1724 aaKnown RBP17.46■□□□□ 0.39
CCDC178-201ENST00000300227 PIP4K2AP48426 406 aaPredicted RBP17.46■□□□□ 0.38
CCDC178-201ENST00000300227 MEIS3Q99687 375 aa17.46■□□□□ 0.38
CCDC178-201ENST00000300227 HEG1Q9ULI3 1381 aa17.46■□□□□ 0.38
CCDC178-201ENST00000300227 KDM3BQ7LBC6 1761 aa17.45■□□□□ 0.38
CCDC178-201ENST00000300227 SYTL4Q96C24 671 aaPredicted RBP17.45■□□□□ 0.38
CCDC178-201ENST00000300227 TMOD3Q9NYL9 352 aa17.45■□□□□ 0.38
CCDC178-201ENST00000300227 USP16Q9Y5T5 823 aa17.45■□□□□ 0.38
CCDC178-201ENST00000300227 SNRPA1P09661 255 aaKnown RBP17.44■□□□□ 0.38
CCDC178-201ENST00000300227 MYL6BP14649 208 aa17.44■□□□□ 0.38
CCDC178-201ENST00000300227 AIMP1Q12904 312 aaKnown RBP17.44■□□□□ 0.38
CCDC178-201ENST00000300227 ADAMTS7Q9UKP4 1686 aa17.44■□□□□ 0.38
CCDC178-201ENST00000300227 CCT4P50991 539 aaKnown RBP17.44■□□□□ 0.38
CCDC178-201ENST00000300227 PI4KAP2A4QPH2 592 aa17.44■□□□□ 0.38
CCDC178-201ENST00000300227 PI4KAP1Q8N8J0 262 aa17.44■□□□□ 0.38
CCDC178-201ENST00000300227 SCN11AQ9UI33 1791 aa17.44■□□□□ 0.38
CCDC178-201ENST00000300227 DISP2A7MBM2 1401 aa17.43■□□□□ 0.38
CCDC178-201ENST00000300227 DDB1Q16531 1140 aa17.43■□□□□ 0.38
CCDC178-201ENST00000300227 UNC5CLQ8IV45 518 aa17.43■□□□□ 0.38
CCDC178-201ENST00000300227 SPATA31A5Q5VU36 1347 aa17.43■□□□□ 0.38
CCDC178-201ENST00000300227 SPATA31A7Q8IWB4 1347 aa17.43■□□□□ 0.38
CCDC178-201ENST00000300227 MYT1Q01538 1121 aa17.42■□□□□ 0.38
CCDC178-201ENST00000300227 HDAC1Q13547 482 aaPredicted RBP17.42■□□□□ 0.38
CCDC178-201ENST00000300227 MEX3CQ5U5Q3 659 aaKnown RBP17.42■□□□□ 0.38
CCDC178-201ENST00000300227 VIRMAQ69YN4 1812 aaKnown RBP17.42■□□□□ 0.38
CCDC178-201ENST00000300227 MRC1P22897 1456 aa17.42■□□□□ 0.38
CCDC178-201ENST00000300227 FAM98CQ17RN3 349 aaKnown RBP17.41■□□□□ 0.38
CCDC178-201ENST00000300227 PIGBQ92521 554 aa17.41■□□□□ 0.38
CCDC178-201ENST00000300227 DDX21Q9NR30 783 aaKnown RBP eCLIP17.41■□□□□ 0.38
CCDC178-201ENST00000300227 PDZRN3Q9UPQ7 1066 aa17.41■□□□□ 0.38
CCDC178-201ENST00000300227 BCL11AQ9H165 835 aa17.41■□□□□ 0.38
CCDC178-201ENST00000300227 ASAP1Q9ULH1 1129 aa17.41■□□□□ 0.38
CCDC178-201ENST00000300227 THRAP3Q9Y2W1 955 aaKnown RBP17.41■□□□□ 0.38
CCDC178-201ENST00000300227 SLIT2O94813 1529 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms