RNA–Protein interactions for RNA: ENST00000299638.7

POLR2M-201, Transcript of RNA polymerase II subunit M, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene POLR2M, Length 4,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2M-201ENST00000299638 IL16Q14005 1332 aa14.01□□□□□ -0.17
POLR2M-201ENST00000299638 ZNF219Q9P2Y4 722 aaPredicted RBP14.01□□□□□ -0.17
POLR2M-201ENST00000299638 VPS37CA5D8V6 355 aaPredicted RBP14□□□□□ -0.17
POLR2M-201ENST00000299638 RNMTO43148 476 aaKnown RBP14□□□□□ -0.17
POLR2M-201ENST00000299638 RRP12Q5JTH9 1297 aaKnown RBP14□□□□□ -0.17
POLR2M-201ENST00000299638 TTC39AQ5SRH9 613 aa14□□□□□ -0.17
POLR2M-201ENST00000299638 SNRKQ9NRH2 765 aa14□□□□□ -0.17
POLR2M-201ENST00000299638 H3BQV1 296 aa13.99□□□□□ -0.17
POLR2M-201ENST00000299638 SF3B2Q13435 895 aaKnown RBP13.99□□□□□ -0.17
POLR2M-201ENST00000299638 IFFO2Q5TF58 517 aa13.99□□□□□ -0.17
POLR2M-201ENST00000299638 ABCF2Q9UG63 623 aa13.99□□□□□ -0.17
POLR2M-201ENST00000299638 PA2G4Q9UQ80 394 aaKnown RBP13.99□□□□□ -0.17
POLR2M-201ENST00000299638 PLEKHG1Q9ULL1 1385 aa13.99□□□□□ -0.17
POLR2M-201ENST00000299638 METTL24Q5JXM2 366 aa13.99□□□□□ -0.17
POLR2M-201ENST00000299638 TRDNQ13061 729 aa13.98□□□□□ -0.17
POLR2M-201ENST00000299638 CCDC158Q5M9N0 1113 aa13.98□□□□□ -0.17
POLR2M-201ENST00000299638 ATP6V1AP38606 617 aa13.98□□□□□ -0.17
POLR2M-201ENST00000299638 FAM98CQ17RN3 349 aaKnown RBP13.98□□□□□ -0.17
POLR2M-201ENST00000299638 UPF3BQ9BZI7 483 aaKnown RBP13.98□□□□□ -0.17
POLR2M-201ENST00000299638 RIMBP3CA6NJZ7 1639 aa13.98□□□□□ -0.17
POLR2M-201ENST00000299638 RIMBP3BA6NNM3 1639 aa13.98□□□□□ -0.17
POLR2M-201ENST00000299638 RIMBP3Q9UFD9 1639 aa13.98□□□□□ -0.17
POLR2M-201ENST00000299638 ZPR1O75312 459 aa13.98□□□□□ -0.17
POLR2M-201ENST00000299638 IDH1O75874 414 aaKnown RBP13.98□□□□□ -0.17
POLR2M-201ENST00000299638 LRRFIP1Q32MZ4 808 aaKnown RBP13.98□□□□□ -0.17
POLR2M-201ENST00000299638 RNF20Q5VTR2 975 aa13.98□□□□□ -0.17
POLR2M-201ENST00000299638 ERC1Q8IUD2 1116 aa13.98□□□□□ -0.17
POLR2M-201ENST00000299638 IL17REQ8NFR9 667 aa13.98□□□□□ -0.17
POLR2M-201ENST00000299638 CFAP74Q9C0B2 1584 aa13.98□□□□□ -0.17
POLR2M-201ENST00000299638 FAM182BQ5T319 152 aa13.97□□□□□ -0.17
POLR2M-201ENST00000299638 SBNO1A3KN83 1393 aa13.97□□□□□ -0.17
POLR2M-201ENST00000299638 A1BGP04217 495 aa13.97□□□□□ -0.17
POLR2M-201ENST00000299638 CPLX1O14810 134 aa13.97□□□□□ -0.17
POLR2M-201ENST00000299638 MX1P20591 662 aa13.97□□□□□ -0.17
POLR2M-201ENST00000299638 NFXL1Q6ZNB6 911 aa13.97□□□□□ -0.17
POLR2M-201ENST00000299638 KIF1BPQ96EK5 621 aa13.97□□□□□ -0.17
POLR2M-201ENST00000299638 NPC1L1Q9UHC9 1359 aa13.97□□□□□ -0.17
POLR2M-201ENST00000299638 SIRT1Q96EB6 747 aa13.97□□□□□ -0.17
POLR2M-201ENST00000299638 LARP6Q9BRS8 491 aaKnown RBP13.97□□□□□ -0.17
POLR2M-201ENST00000299638 A2ML1A8K2U0 1454 aa13.96□□□□□ -0.17
POLR2M-201ENST00000299638 CHAF1AQ13111 956 aaPredicted RBP13.96□□□□□ -0.17
POLR2M-201ENST00000299638 NOL10Q9BSC4 688 aaKnown RBP13.96□□□□□ -0.17
POLR2M-201ENST00000299638 DDX49Q9Y6V7 483 aaKnown RBP13.96□□□□□ -0.17
POLR2M-201ENST00000299638 NPHP4O75161 1426 aaPredicted RBP13.96□□□□□ -0.17
POLR2M-201ENST00000299638 RALYLQ86SE5 291 aaKnown RBP13.96□□□□□ -0.17
POLR2M-201ENST00000299638 PTPRCP08575 1304 aa13.96□□□□□ -0.17
POLR2M-201ENST00000299638 MAP3K5Q99683 1374 aa13.96□□□□□ -0.18
POLR2M-201ENST00000299638 SBNO2Q9Y2G9 1366 aa13.96□□□□□ -0.18
POLR2M-201ENST00000299638 PRIM1P49642 420 aaKnown RBP13.96□□□□□ -0.18
POLR2M-201ENST00000299638 STK3Q13188 491 aa13.96□□□□□ -0.18
POLR2M-201ENST00000299638 SF3A1Q15459 793 aaKnown RBP13.96□□□□□ -0.18
POLR2M-201ENST00000299638 ZNF496Q96IT1 587 aaPredicted RBP13.95□□□□□ -0.18
POLR2M-201ENST00000299638 DHX16O60231 1041 aaKnown RBP13.95□□□□□ -0.18
POLR2M-201ENST00000299638 IFIT5Q13325 482 aaKnown RBP13.95□□□□□ -0.18
POLR2M-201ENST00000299638 ZNF790Q6PG37 636 aa13.95□□□□□ -0.18
POLR2M-201ENST00000299638 DCAF5Q96JK2 942 aa13.95□□□□□ -0.18
POLR2M-201ENST00000299638 CLTCL1P53675 1640 aa13.95□□□□□ -0.18
POLR2M-201ENST00000299638 CHL1O00533 1208 aa13.94□□□□□ -0.18
POLR2M-201ENST00000299638 LMBR1LQ6UX01 489 aa13.94□□□□□ -0.18
POLR2M-201ENST00000299638 LDHAL6AQ6ZMR3 332 aa13.94□□□□□ -0.18
POLR2M-201ENST00000299638 IQSEC3Q9UPP2 1182 aaPredicted RBP13.94□□□□□ -0.18
POLR2M-201ENST00000299638 ABCA9Q8IUA7 1624 aa13.94□□□□□ -0.18
POLR2M-201ENST00000299638 CCDC24Q8N4L8 307 aa13.93□□□□□ -0.18
POLR2M-201ENST00000299638 NLRP1Q9C000 1473 aa13.93□□□□□ -0.18
POLR2M-201ENST00000299638 ZFYVE9O95405 1425 aa13.93□□□□□ -0.18
POLR2M-201ENST00000299638 PIK3R4Q99570 1358 aa13.93□□□□□ -0.18
POLR2M-201ENST00000299638 SYNE3Q6ZMZ3 975 aa13.93□□□□□ -0.18
POLR2M-201ENST00000299638 SMC3Q9UQE7 1217 aa13.93□□□□□ -0.18
POLR2M-201ENST00000299638 KDM5CP41229 1560 aa13.93□□□□□ -0.18
POLR2M-201ENST00000299638 DNTTIP2Q5QJE6 756 aaKnown RBP13.93□□□□□ -0.18
POLR2M-201ENST00000299638 KLHDC4Q8TBB5 520 aa13.93□□□□□ -0.18
POLR2M-201ENST00000299638 KSR2Q6VAB6 950 aa13.93□□□□□ -0.18
POLR2M-201ENST00000299638 CWC25Q9NXE8 425 aaPredicted RBP13.93□□□□□ -0.18
POLR2M-201ENST00000299638 BCL11BQ9C0K0 894 aaPredicted RBP13.92□□□□□ -0.18
POLR2M-201ENST00000299638 KIAA0232Q92628 1395 aa13.92□□□□□ -0.18
POLR2M-201ENST00000299638 SETD1BQ9UPS6 1966 aaKnown RBP13.92□□□□□ -0.18
POLR2M-201ENST00000299638 IGHMBP2P38935 993 aaKnown RBP13.92□□□□□ -0.18
POLR2M-201ENST00000299638 ATP2B1P20020 1258 aa13.92□□□□□ -0.18
POLR2M-201ENST00000299638 HELBQ8NG08 1087 aaPredicted RBP13.92□□□□□ -0.18
POLR2M-201ENST00000299638 RASSF8Q8NHQ8 419 aa13.92□□□□□ -0.18
POLR2M-201ENST00000299638 USP16Q9Y5T5 823 aa13.92□□□□□ -0.18
POLR2M-201ENST00000299638 PLXNC1O60486 1568 aa13.91□□□□□ -0.18
POLR2M-201ENST00000299638 AKAP17AQ02040 695 aaKnown RBP13.91□□□□□ -0.18
POLR2M-201ENST00000299638 GRM8O00222 908 aa13.91□□□□□ -0.18
POLR2M-201ENST00000299638 KCNQ4P56696 695 aa13.91□□□□□ -0.18
POLR2M-201ENST00000299638 VPS53Q5VIR6 699 aa13.91□□□□□ -0.18
POLR2M-201ENST00000299638 ARHGEF25Q86VW2 580 aa13.91□□□□□ -0.18
POLR2M-201ENST00000299638 LRP2BPQ9P2M1 347 aa13.91□□□□□ -0.18
POLR2M-201ENST00000299638 ARAP3Q8WWN8 1544 aa13.91□□□□□ -0.18
POLR2M-201ENST00000299638 ARHGAP31Q2M1Z3 1444 aa13.91□□□□□ -0.18
POLR2M-201ENST00000299638 CREBRFQ8IUR6 639 aa13.91□□□□□ -0.18
POLR2M-201ENST00000299638 CHMP5Q9NZZ3 219 aa13.91□□□□□ -0.18
POLR2M-201ENST00000299638 RAI14Q9P0K7 980 aa13.91□□□□□ -0.18
POLR2M-201ENST00000299638 MYOM2P54296 1465 aa13.91□□□□□ -0.18
POLR2M-201ENST00000299638 HTATSF1O43719 755 aaKnown RBP13.9□□□□□ -0.18
POLR2M-201ENST00000299638 PPFIA3O75145 1194 aa13.9□□□□□ -0.18
POLR2M-201ENST00000299638 DNAJC10Q8IXB1 793 aa13.9□□□□□ -0.18
POLR2M-201ENST00000299638 ARHGAP45Q92619 1136 aa13.9□□□□□ -0.18
POLR2M-201ENST00000299638 RHPN1Q8TCX5 695 aa13.9□□□□□ -0.18
POLR2M-201ENST00000299638 FAM89AQ96GI7 184 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms