RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 PLEKHG1Q9ULL1 1385 aa12.34□□□□□ -0.43
GABRB3-201ENST00000299267 CWF19L2Q2TBE0 894 aaKnown RBP12.34□□□□□ -0.43
GABRB3-201ENST00000299267 TTC39AQ5SRH9 613 aa12.34□□□□□ -0.43
GABRB3-201ENST00000299267 NOL10Q9BSC4 688 aaKnown RBP12.34□□□□□ -0.43
GABRB3-201ENST00000299267 IL16Q14005 1332 aa12.34□□□□□ -0.43
GABRB3-201ENST00000299267 PPP1R42Q7Z4L9 355 aa12.34□□□□□ -0.43
GABRB3-201ENST00000299267 WWC3Q9ULE0 1092 aa12.34□□□□□ -0.43
GABRB3-201ENST00000299267 TRDNQ13061 729 aa12.34□□□□□ -0.43
GABRB3-201ENST00000299267 CCDC158Q5M9N0 1113 aa12.34□□□□□ -0.43
GABRB3-201ENST00000299267 ERC1Q8IUD2 1116 aa12.33□□□□□ -0.43
GABRB3-201ENST00000299267 H3BQV1 296 aa12.33□□□□□ -0.44
GABRB3-201ENST00000299267 ATP6V1AP38606 617 aa12.33□□□□□ -0.44
GABRB3-201ENST00000299267 IFFO2Q5TF58 517 aa12.33□□□□□ -0.44
GABRB3-201ENST00000299267 MRPL50Q8N5N7 158 aaKnown RBP12.33□□□□□ -0.44
GABRB3-201ENST00000299267 RNMTO43148 476 aaKnown RBP12.33□□□□□ -0.44
GABRB3-201ENST00000299267 FAM98CQ17RN3 349 aaKnown RBP12.33□□□□□ -0.44
GABRB3-201ENST00000299267 RRP12Q5JTH9 1297 aaKnown RBP12.33□□□□□ -0.44
GABRB3-201ENST00000299267 METTL24Q5JXM2 366 aa12.33□□□□□ -0.44
GABRB3-201ENST00000299267 RNF20Q5VTR2 975 aa12.33□□□□□ -0.44
GABRB3-201ENST00000299267 ABCF2Q9UG63 623 aa12.33□□□□□ -0.44
GABRB3-201ENST00000299267 NPHP4O75161 1426 aaPredicted RBP12.32□□□□□ -0.44
GABRB3-201ENST00000299267 KCNQ3O43525 872 aa12.32□□□□□ -0.44
GABRB3-201ENST00000299267 VPS37CA5D8V6 355 aaPredicted RBP12.32□□□□□ -0.44
GABRB3-201ENST00000299267 SIRT1Q96EB6 747 aa12.32□□□□□ -0.44
GABRB3-201ENST00000299267 CPLX1O14810 134 aa12.32□□□□□ -0.44
GABRB3-201ENST00000299267 NFXL1Q6ZNB6 911 aa12.32□□□□□ -0.44
GABRB3-201ENST00000299267 SBNO1A3KN83 1393 aa12.32□□□□□ -0.44
GABRB3-201ENST00000299267 IDH1O75874 414 aaKnown RBP12.31□□□□□ -0.44
GABRB3-201ENST00000299267 SNRKQ9NRH2 765 aa12.31□□□□□ -0.44
GABRB3-201ENST00000299267 DHX16O60231 1041 aaKnown RBP12.31□□□□□ -0.44
GABRB3-201ENST00000299267 CHAF1AQ13111 956 aaPredicted RBP12.31□□□□□ -0.44
GABRB3-201ENST00000299267 RALYLQ86SE5 291 aaKnown RBP12.31□□□□□ -0.44
GABRB3-201ENST00000299267 MAP3K5Q99683 1374 aa12.3□□□□□ -0.44
GABRB3-201ENST00000299267 DEKP35659 375 aaKnown RBP12.3□□□□□ -0.44
GABRB3-201ENST00000299267 KIF1BPQ96EK5 621 aa12.3□□□□□ -0.44
GABRB3-201ENST00000299267 A2ML1A8K2U0 1454 aa12.3□□□□□ -0.44
GABRB3-201ENST00000299267 PTPRCP08575 1304 aa12.3□□□□□ -0.44
GABRB3-201ENST00000299267 IFIT5Q13325 482 aaKnown RBP12.3□□□□□ -0.44
GABRB3-201ENST00000299267 C16orf71Q8IYS4 520 aaPredicted RBP12.3□□□□□ -0.44
GABRB3-201ENST00000299267 DCAF5Q96JK2 942 aa12.3□□□□□ -0.44
GABRB3-201ENST00000299267 PA2G4Q9UQ80 394 aaKnown RBP12.3□□□□□ -0.44
GABRB3-201ENST00000299267 ABCA9Q8IUA7 1624 aa12.3□□□□□ -0.44
GABRB3-201ENST00000299267 NPC1L1Q9UHC9 1359 aa12.3□□□□□ -0.44
GABRB3-201ENST00000299267 MX1P20591 662 aa12.3□□□□□ -0.44
GABRB3-201ENST00000299267 PRIM1P49642 420 aaKnown RBP12.3□□□□□ -0.44
GABRB3-201ENST00000299267 SF3A1Q15459 793 aaKnown RBP12.3□□□□□ -0.44
GABRB3-201ENST00000299267 FAM182BQ5T319 152 aa12.3□□□□□ -0.44
GABRB3-201ENST00000299267 SYNE3Q6ZMZ3 975 aa12.3□□□□□ -0.44
GABRB3-201ENST00000299267 BCL11BQ9C0K0 894 aaPredicted RBP12.3□□□□□ -0.44
GABRB3-201ENST00000299267 A1BGP04217 495 aa12.29□□□□□ -0.44
GABRB3-201ENST00000299267 SBNO2Q9Y2G9 1366 aa12.29□□□□□ -0.44
GABRB3-201ENST00000299267 NLRP1Q9C000 1473 aa12.29□□□□□ -0.44
GABRB3-201ENST00000299267 IL17REQ8NFR9 667 aa12.29□□□□□ -0.44
GABRB3-201ENST00000299267 ZFYVE9O95405 1425 aa12.29□□□□□ -0.44
GABRB3-201ENST00000299267 ZNF790Q6PG37 636 aa12.29□□□□□ -0.44
GABRB3-201ENST00000299267 IGHMBP2P38935 993 aaKnown RBP12.29□□□□□ -0.44
GABRB3-201ENST00000299267 ARAP3Q8WWN8 1544 aa12.28□□□□□ -0.44
GABRB3-201ENST00000299267 CLTCL1P53675 1640 aa12.28□□□□□ -0.44
GABRB3-201ENST00000299267 LDHAL6AQ6ZMR3 332 aa12.28□□□□□ -0.44
GABRB3-201ENST00000299267 AKAP17AQ02040 695 aaKnown RBP12.28□□□□□ -0.44
GABRB3-201ENST00000299267 UPF3BQ9BZI7 483 aaKnown RBP12.28□□□□□ -0.44
GABRB3-201ENST00000299267 CWC25Q9NXE8 425 aaPredicted RBP12.28□□□□□ -0.44
GABRB3-201ENST00000299267 DDX49Q9Y6V7 483 aaKnown RBP12.28□□□□□ -0.44
GABRB3-201ENST00000299267 PIK3R4Q99570 1358 aa12.28□□□□□ -0.44
GABRB3-201ENST00000299267 STK3Q13188 491 aa12.28□□□□□ -0.44
GABRB3-201ENST00000299267 VPS53Q5VIR6 699 aa12.28□□□□□ -0.44
GABRB3-201ENST00000299267 RASSF8Q8NHQ8 419 aa12.28□□□□□ -0.44
GABRB3-201ENST00000299267 ZNF496Q96IT1 587 aaPredicted RBP12.28□□□□□ -0.44
GABRB3-201ENST00000299267 ZNF652Q9Y2D9 606 aa12.28□□□□□ -0.44
GABRB3-201ENST00000299267 PLXNC1O60486 1568 aa12.28□□□□□ -0.44
GABRB3-201ENST00000299267 LMBR1LQ6UX01 489 aa12.27□□□□□ -0.44
GABRB3-201ENST00000299267 AK7Q96M32 723 aa12.27□□□□□ -0.44
GABRB3-201ENST00000299267 TRIM34Q9BYJ4 488 aa12.27□□□□□ -0.44
GABRB3-201ENST00000299267 SETD1BQ9UPS6 1966 aaKnown RBP12.27□□□□□ -0.44
GABRB3-201ENST00000299267 AMOTL1Q8IY63 956 aa12.27□□□□□ -0.45
GABRB3-201ENST00000299267 IQSEC3Q9UPP2 1182 aaPredicted RBP12.27□□□□□ -0.45
GABRB3-201ENST00000299267 SMC3Q9UQE7 1217 aa12.27□□□□□ -0.45
GABRB3-201ENST00000299267 KIAA0232Q92628 1395 aa12.27□□□□□ -0.45
GABRB3-201ENST00000299267 CHL1O00533 1208 aa12.27□□□□□ -0.45
GABRB3-201ENST00000299267 KSR2Q6VAB6 950 aa12.27□□□□□ -0.45
GABRB3-201ENST00000299267 LRP2BPQ9P2M1 347 aa12.27□□□□□ -0.45
GABRB3-201ENST00000299267 ARHGAP31Q2M1Z3 1444 aa12.26□□□□□ -0.45
GABRB3-201ENST00000299267 KIF1BO60333 1816 aa12.26□□□□□ -0.45
GABRB3-201ENST00000299267 HTATSF1O43719 755 aaKnown RBP12.26□□□□□ -0.45
GABRB3-201ENST00000299267 DNTTIP2Q5QJE6 756 aaKnown RBP12.26□□□□□ -0.45
GABRB3-201ENST00000299267 RAI14Q9P0K7 980 aa12.26□□□□□ -0.45
GABRB3-201ENST00000299267 RFC4P35249 363 aa12.26□□□□□ -0.45
GABRB3-201ENST00000299267 LARP6Q9BRS8 491 aaKnown RBP12.26□□□□□ -0.45
GABRB3-201ENST00000299267 KDM5CP41229 1560 aa12.26□□□□□ -0.45
GABRB3-201ENST00000299267 TET3O43151 1660 aa12.26□□□□□ -0.45
GABRB3-201ENST00000299267 MYOM2P54296 1465 aa12.26□□□□□ -0.45
GABRB3-201ENST00000299267 CPLX2Q6PUV4 134 aaKnown RBP12.26□□□□□ -0.45
GABRB3-201ENST00000299267 CCDC24Q8N4L8 307 aa12.25□□□□□ -0.45
GABRB3-201ENST00000299267 TEX13AQ9BXU3 409 aaPredicted RBP12.25□□□□□ -0.45
GABRB3-201ENST00000299267 SHROOM2Q13796 1616 aa12.25□□□□□ -0.45
GABRB3-201ENST00000299267 ARHGEF25Q86VW2 580 aa12.25□□□□□ -0.45
GABRB3-201ENST00000299267 GRM8O00222 908 aa12.25□□□□□ -0.45
GABRB3-201ENST00000299267 CREBRFQ8IUR6 639 aa12.25□□□□□ -0.45
GABRB3-201ENST00000299267 ANKIB1Q9P2G1 1089 aa12.25□□□□□ -0.45
GABRB3-201ENST00000299267 IQGAP3Q86VI3 1631 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms