RNA–Protein interactions for RNA: ENST00000297689.3

NFIL3-201, Transcript of nuclear factor, interleukin 3 regulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NFIL3, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIL3-201ENST00000297689 RBM42Q9BTD8 480 aaKnown RBP24.48■■□□□ 1.51
NFIL3-201ENST00000297689 C19orf44Q9H6X5 657 aa24.48■■□□□ 1.51
NFIL3-201ENST00000297689 N4BP2Q86UW6 1770 aaPredicted RBP24.48■■□□□ 1.51
NFIL3-201ENST00000297689 RGPD2P0DJD1 1756 aa24.47■■□□□ 1.51
NFIL3-201ENST00000297689 SMARCA5O60264 1052 aaPredicted RBP24.47■■□□□ 1.51
NFIL3-201ENST00000297689 HMMRO75330 724 aa24.47■■□□□ 1.51
NFIL3-201ENST00000297689 SDSP20132 328 aa24.47■■□□□ 1.51
NFIL3-201ENST00000297689 CCDC30Q5VVM6 783 aa24.47■■□□□ 1.51
NFIL3-201ENST00000297689 KCNH5Q8NCM2 988 aa24.47■■□□□ 1.51
NFIL3-201ENST00000297689 USP26Q9BXU7 913 aa24.47■■□□□ 1.51
NFIL3-201ENST00000297689 FLIIQ13045 1269 aa24.47■■□□□ 1.51
NFIL3-201ENST00000297689 STK31Q9BXU1 1019 aa24.47■■□□□ 1.51
NFIL3-201ENST00000297689 K7ELQ4 463 aaPredicted RBP24.46■■□□□ 1.51
NFIL3-201ENST00000297689 TAF7Q15545 349 aaPredicted RBP24.46■■□□□ 1.51
NFIL3-201ENST00000297689 SLC4A10Q6U841 1118 aa24.45■■□□□ 1.5
NFIL3-201ENST00000297689 CEMIPQ8WUJ3 1361 aa24.45■■□□□ 1.5
NFIL3-201ENST00000297689 GNAI2P04899 355 aa24.44■■□□□ 1.5
NFIL3-201ENST00000297689 NBPF6Q5VWK0 638 aa24.44■■□□□ 1.5
NFIL3-201ENST00000297689 KRT28Q7Z3Y7 464 aa24.44■■□□□ 1.5
NFIL3-201ENST00000297689 NBPF4Q96M43 638 aa24.44■■□□□ 1.5
NFIL3-201ENST00000297689 SALL3Q9BXA9 1300 aa24.44■■□□□ 1.5
NFIL3-201ENST00000297689 MED1Q15648 1581 aaPredicted RBP24.44■■□□□ 1.5
NFIL3-201ENST00000297689 GCP02774 474 aa24.44■■□□□ 1.5
NFIL3-201ENST00000297689 HSP90AB1P08238 724 aaKnown RBP24.44■■□□□ 1.5
NFIL3-201ENST00000297689 RAB3GAP1Q15042 981 aa24.44■■□□□ 1.5
NFIL3-201ENST00000297689 PXDNLA1KZ92 1463 aa24.43■■□□□ 1.5
NFIL3-201ENST00000297689 MST1RQ04912 1400 aa24.43■■□□□ 1.5
NFIL3-201ENST00000297689 ZBTB7CA1YPR0 619 aa24.42■■□□□ 1.5
NFIL3-201ENST00000297689 ARHGEF25Q86VW2 580 aa24.42■■□□□ 1.5
NFIL3-201ENST00000297689 ZNF335Q9H4Z2 1342 aaPredicted RBP24.41■■□□□ 1.5
NFIL3-201ENST00000297689 XIRP1Q702N8 1843 aaKnown RBP24.41■■□□□ 1.5
NFIL3-201ENST00000297689 FSD2A1L4K1 749 aa24.41■■□□□ 1.5
NFIL3-201ENST00000297689 RABEP1Q15276 862 aa24.41■■□□□ 1.5
NFIL3-201ENST00000297689 TNPO1Q92973 898 aaKnown RBP24.41■■□□□ 1.5
NFIL3-201ENST00000297689 ALS2Q96Q42 1657 aa24.41■■□□□ 1.5
NFIL3-201ENST00000297689 TRAK2O60296 914 aa24.41■■□□□ 1.5
NFIL3-201ENST00000297689 GNAI3P08754 354 aa24.41■■□□□ 1.5
NFIL3-201ENST00000297689 PDE1AP54750 535 aa24.41■■□□□ 1.5
NFIL3-201ENST00000297689 TUBGCP6Q96RT7 1819 aa24.4■■□□□ 1.5
NFIL3-201ENST00000297689 DDX11L8A8MPP1 907 aa24.4■■□□□ 1.5
NFIL3-201ENST00000297689 ATP8B2P98198 1209 aa24.4■■□□□ 1.5
NFIL3-201ENST00000297689 PLEKHG5O94827 1062 aa24.39■■□□□ 1.5
NFIL3-201ENST00000297689 FKBP5Q13451 457 aaPredicted RBP24.39■■□□□ 1.5
NFIL3-201ENST00000297689 LRRC59Q96AG4 307 aaKnown RBP24.39■■□□□ 1.49
NFIL3-201ENST00000297689 LMOD2Q6P5Q4 547 aa24.38■■□□□ 1.49
NFIL3-201ENST00000297689 DCCP43146 1447 aa24.38■■□□□ 1.49
NFIL3-201ENST00000297689 APBB1O00213 710 aa24.38■■□□□ 1.49
NFIL3-201ENST00000297689 PNMA6EA0A0J9YXQ4 647 aa24.36■■□□□ 1.49
NFIL3-201ENST00000297689 ATF3P18847 181 aa24.36■■□□□ 1.49
NFIL3-201ENST00000297689 L1TD1Q5T7N2 865 aaKnown RBP24.36■■□□□ 1.49
NFIL3-201ENST00000297689 CLEC17AQ6ZS10 378 aa24.36■■□□□ 1.49
NFIL3-201ENST00000297689 USP44Q9H0E7 712 aa24.36■■□□□ 1.49
NFIL3-201ENST00000297689 NCAPD2Q15021 1401 aa24.36■■□□□ 1.49
NFIL3-201ENST00000297689 IBTKQ9P2D0 1353 aaPredicted RBP24.35■■□□□ 1.49
NFIL3-201ENST00000297689 DDX17Q92841 729 aaKnown RBP24.34■■□□□ 1.49
NFIL3-201ENST00000297689 EXOC6BQ9Y2D4 811 aa24.34■■□□□ 1.49
NFIL3-201ENST00000297689 KDM3BQ7LBC6 1761 aa24.34■■□□□ 1.49
NFIL3-201ENST00000297689 CASC1Q6TDU7 716 aa24.34■■□□□ 1.49
NFIL3-201ENST00000297689 RGPD5Q99666 1765 aa24.33■■□□□ 1.49
NFIL3-201ENST00000297689 NECTIN2Q92692 538 aa24.33■■□□□ 1.49
NFIL3-201ENST00000297689 AXIN2Q9Y2T1 843 aa24.33■■□□□ 1.49
NFIL3-201ENST00000297689 CAMTA1Q9Y6Y1 1673 aa24.33■■□□□ 1.49
NFIL3-201ENST00000297689 HOXB7P09629 217 aa24.33■■□□□ 1.48
NFIL3-201ENST00000297689 EIF4A1P60842 406 aaKnown RBP24.33■■□□□ 1.48
NFIL3-201ENST00000297689 LRRCC1Q9C099 1032 aa24.33■■□□□ 1.48
NFIL3-201ENST00000297689 LMO7Q8WWI1 1683 aa24.32■■□□□ 1.48
NFIL3-201ENST00000297689 REC8O95072 547 aa24.32■■□□□ 1.48
NFIL3-201ENST00000297689 STAP2Q9UGK3 403 aa24.32■■□□□ 1.48
NFIL3-201ENST00000297689 ERC2O15083 957 aa24.31■■□□□ 1.48
NFIL3-201ENST00000297689 HDGFL1Q5TGJ6 251 aa24.31■■□□□ 1.48
NFIL3-201ENST00000297689 CADPS2Q86UW7 1296 aa24.31■■□□□ 1.48
NFIL3-201ENST00000297689 ANKRD24Q8TF21 1146 aa24.31■■□□□ 1.48
NFIL3-201ENST00000297689 GBP4Q96PP9 640 aa24.31■■□□□ 1.48
NFIL3-201ENST00000297689 LGR6Q9HBX8 967 aa24.31■■□□□ 1.48
NFIL3-201ENST00000297689 PHAXQ9H814 394 aaKnown RBP24.3■■□□□ 1.48
NFIL3-201ENST00000297689 LRRFIP2Q9Y608 721 aaKnown RBP24.3■■□□□ 1.48
NFIL3-201ENST00000297689 SSH3Q8TE77 659 aa24.3■■□□□ 1.48
NFIL3-201ENST00000297689 HSP90AA1P07900 732 aaKnown RBP24.29■■□□□ 1.48
NFIL3-201ENST00000297689 XRCC6P12956 609 aaKnown RBP eCLIP24.29■■□□□ 1.48
NFIL3-201ENST00000297689 RTN4Q9NQC3 1192 aaKnown RBP24.28■■□□□ 1.48
NFIL3-201ENST00000297689 FOXD4L1Q9NU39 408 aa24.28■■□□□ 1.48
NFIL3-201ENST00000297689 GOLGA6L3A6NEY3 463 aa24.28■■□□□ 1.48
NFIL3-201ENST00000297689 MX1P20591 662 aa24.28■■□□□ 1.48
NFIL3-201ENST00000297689 GZF1Q9H116 711 aaPredicted RBP24.27■■□□□ 1.48
NFIL3-201ENST00000297689 CYP2E1P05181 493 aaPredicted RBP24.26■■□□□ 1.47
NFIL3-201ENST00000297689 POLA2Q14181 598 aa24.26■■□□□ 1.47
NFIL3-201ENST00000297689 AKAP4Q5JQC9 854 aa24.26■■□□□ 1.47
NFIL3-201ENST00000297689 PXDNQ92626 1479 aa24.26■■□□□ 1.47
NFIL3-201ENST00000297689 AOX1Q06278 1338 aa24.25■■□□□ 1.47
NFIL3-201ENST00000297689 UBTFL1P0CB47 393 aaPredicted RBP24.25■■□□□ 1.47
NFIL3-201ENST00000297689 PTMSP20962 102 aa24.25■■□□□ 1.47
NFIL3-201ENST00000297689 SSFA2P28290 1259 aa24.25■■□□□ 1.47
NFIL3-201ENST00000297689 ZC3H6P61129 1189 aaKnown RBP24.25■■□□□ 1.47
NFIL3-201ENST00000297689 SRCIN1Q9C0H9 1055 aa24.25■■□□□ 1.47
NFIL3-201ENST00000297689 IL17RAQ96F46 866 aa24.25■■□□□ 1.47
NFIL3-201ENST00000297689 SKOR2Q2VWA4 1001 aaPredicted RBP24.24■■□□□ 1.47
NFIL3-201ENST00000297689 PLEKHO1Q53GL0 409 aaPredicted RBP24.24■■□□□ 1.47
NFIL3-201ENST00000297689 ZNF530Q6P9A1 599 aaPredicted RBP24.24■■□□□ 1.47
NFIL3-201ENST00000297689 ESYT1Q9BSJ8 1104 aa24.24■■□□□ 1.47
NFIL3-201ENST00000297689 ISY1Q9ULR0 285 aaKnown RBP24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms