RNA–Protein interactions for RNA: ENST00000296446.12

PRKAR2A-202, Transcript of protein kinase cAMP-dependent type II regulatory subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PRKAR2A, Length 3,318 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR2A-202ENST00000296446 CDK12Q9NYV4 1490 aaPredicted RBP17.16■□□□□ 0.34
PRKAR2A-202ENST00000296446 NBPF7P0C2Y1 421 aaPredicted RBP17.16■□□□□ 0.34
PRKAR2A-202ENST00000296446 TTC21AQ8NDW8 1320 aa17.15■□□□□ 0.34
PRKAR2A-202ENST00000296446 CWF19L2Q2TBE0 894 aaKnown RBP17.15■□□□□ 0.34
PRKAR2A-202ENST00000296446 RPAP2Q8IXW5 612 aaPredicted RBP17.15■□□□□ 0.34
PRKAR2A-202ENST00000296446 MCM4P33991 863 aa17.15■□□□□ 0.34
PRKAR2A-202ENST00000296446 TTC22Q5TAA0 569 aa17.15■□□□□ 0.34
PRKAR2A-202ENST00000296446 ANKRD24Q8TF21 1146 aa17.15■□□□□ 0.34
PRKAR2A-202ENST00000296446 KRT28Q7Z3Y7 464 aa17.14■□□□□ 0.34
PRKAR2A-202ENST00000296446 AXIN2Q9Y2T1 843 aa17.14■□□□□ 0.34
PRKAR2A-202ENST00000296446 SBNO1A3KN83 1393 aa17.14■□□□□ 0.33
PRKAR2A-202ENST00000296446 TRAK2O60296 914 aa17.14■□□□□ 0.33
PRKAR2A-202ENST00000296446 SSFA2P28290 1259 aa17.14■□□□□ 0.33
PRKAR2A-202ENST00000296446 NEK4P51957 841 aa17.14■□□□□ 0.33
PRKAR2A-202ENST00000296446 SIRT1Q96EB6 747 aa17.14■□□□□ 0.33
PRKAR2A-202ENST00000296446 PA2G4Q9UQ80 394 aaKnown RBP17.14■□□□□ 0.33
PRKAR2A-202ENST00000296446 CHMP3Q9Y3E7 222 aa17.14■□□□□ 0.33
PRKAR2A-202ENST00000296446 PIK3R4Q99570 1358 aa17.14■□□□□ 0.33
PRKAR2A-202ENST00000296446 CCT4P50991 539 aaKnown RBP17.13■□□□□ 0.33
PRKAR2A-202ENST00000296446 LRRCC1Q9C099 1032 aa17.13■□□□□ 0.33
PRKAR2A-202ENST00000296446 PROSER3Q2NL68 480 aa17.13■□□□□ 0.33
PRKAR2A-202ENST00000296446 PPP1R42Q7Z4L9 355 aa17.13■□□□□ 0.33
PRKAR2A-202ENST00000296446 SRCIN1Q9C0H9 1055 aa17.13■□□□□ 0.33
PRKAR2A-202ENST00000296446 RTL1A6NKG5 1358 aa17.12■□□□□ 0.33
PRKAR2A-202ENST00000296446 MED14O60244 1454 aa17.12■□□□□ 0.33
PRKAR2A-202ENST00000296446 AGLP35573 1532 aa17.12■□□□□ 0.33
PRKAR2A-202ENST00000296446 ATF3P18847 181 aa17.12■□□□□ 0.33
PRKAR2A-202ENST00000296446 TNPO1Q92973 898 aaKnown RBP17.12■□□□□ 0.33
PRKAR2A-202ENST00000296446 DLC1Q96QB1 1528 aa17.12■□□□□ 0.33
PRKAR2A-202ENST00000296446 KLHDC4Q8TBB5 520 aa17.11■□□□□ 0.33
PRKAR2A-202ENST00000296446 RAPGEF4Q8WZA2 1011 aa17.11■□□□□ 0.33
PRKAR2A-202ENST00000296446 ERBB4Q15303 1308 aa17.11■□□□□ 0.33
PRKAR2A-202ENST00000296446 IGSF1Q8N6C5 1336 aa17.11■□□□□ 0.33
PRKAR2A-202ENST00000296446 CLCN1P35523 988 aa17.11■□□□□ 0.33
PRKAR2A-202ENST00000296446 PKP1Q13835 747 aa17.11■□□□□ 0.33
PRKAR2A-202ENST00000296446 PDE1AP54750 535 aa17.11■□□□□ 0.33
PRKAR2A-202ENST00000296446 UNC5CLQ8IV45 518 aa17.11■□□□□ 0.33
PRKAR2A-202ENST00000296446 ZGPATQ8N5A5 531 aaKnown RBP17.11■□□□□ 0.33
PRKAR2A-202ENST00000296446 ADGRB2O60241 1585 aa17.1■□□□□ 0.33
PRKAR2A-202ENST00000296446 NCBP3Q53F19 620 aaKnown RBP17.1■□□□□ 0.33
PRKAR2A-202ENST00000296446 PTPRCP08575 1304 aa17.1■□□□□ 0.33
PRKAR2A-202ENST00000296446 K7ELQ4 463 aaPredicted RBP17.1■□□□□ 0.33
PRKAR2A-202ENST00000296446 GNAI3P08754 354 aa17.1■□□□□ 0.33
PRKAR2A-202ENST00000296446 MCTP1Q6DN14 999 aa17.1■□□□□ 0.33
PRKAR2A-202ENST00000296446 STRN4Q9NRL3 753 aa17.1■□□□□ 0.33
PRKAR2A-202ENST00000296446 PLEKHO1Q53GL0 409 aaPredicted RBP17.09■□□□□ 0.33
PRKAR2A-202ENST00000296446 USP44Q9H0E7 712 aa17.09■□□□□ 0.33
PRKAR2A-202ENST00000296446 MX1P20591 662 aa17.09■□□□□ 0.33
PRKAR2A-202ENST00000296446 NFATC2IPQ8NCF5 419 aa17.08■□□□□ 0.33
PRKAR2A-202ENST00000296446 IP6K1Q92551 441 aa17.08■□□□□ 0.33
PRKAR2A-202ENST00000296446 MAP3K2Q9Y2U5 619 aa17.08■□□□□ 0.33
PRKAR2A-202ENST00000296446 OVOS2A0A0J9YW53 1432 aa17.08■□□□□ 0.32
PRKAR2A-202ENST00000296446 FSD2A1L4K1 749 aa17.08■□□□□ 0.32
PRKAR2A-202ENST00000296446 PTCD1O75127 700 aaKnown RBP17.08■□□□□ 0.32
PRKAR2A-202ENST00000296446 CDC42BPGQ6DT37 1551 aa17.08■□□□□ 0.32
PRKAR2A-202ENST00000296446 OVOS2Q6IE36 1432 aa17.08■□□□□ 0.32
PRKAR2A-202ENST00000296446 CWC27Q6UX04 472 aaKnown RBP17.08■□□□□ 0.32
PRKAR2A-202ENST00000296446 KCNJ4P48050 445 aa17.08■□□□□ 0.32
PRKAR2A-202ENST00000296446 RIC3Q7Z5B4 369 aa17.08■□□□□ 0.32
PRKAR2A-202ENST00000296446 CCDC85AQ96PX6 553 aaPredicted RBP17.08■□□□□ 0.32
PRKAR2A-202ENST00000296446 SPG7Q9UQ90 795 aa17.08■□□□□ 0.32
PRKAR2A-202ENST00000296446 MAP3K5Q99683 1374 aa17.07■□□□□ 0.32
PRKAR2A-202ENST00000296446 KAT6BQ8WYB5 2073 aa17.07■□□□□ 0.32
PRKAR2A-202ENST00000296446 CEP170BQ9Y4F5 1589 aaPredicted RBP17.07■□□□□ 0.32
PRKAR2A-202ENST00000296446 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
PRKAR2A-202ENST00000296446 ATP5J2-PTCD1G3V325 749 aa17.07■□□□□ 0.32
PRKAR2A-202ENST00000296446 DNAAF4Q8WXU2 420 aa17.06■□□□□ 0.32
PRKAR2A-202ENST00000296446 KIF2CQ99661 725 aa17.06■□□□□ 0.32
PRKAR2A-202ENST00000296446 DDX49Q9Y6V7 483 aaKnown RBP17.06■□□□□ 0.32
PRKAR2A-202ENST00000296446 CPA1P15085 419 aa17.06■□□□□ 0.32
PRKAR2A-202ENST00000296446 CCDC8Q9H0W5 538 aaPredicted RBP17.06■□□□□ 0.32
PRKAR2A-202ENST00000296446 NDUFB9Q9Y6M9 179 aa17.06■□□□□ 0.32
PRKAR2A-202ENST00000296446 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.05■□□□□ 0.32
PRKAR2A-202ENST00000296446 BRPF1P55201 1214 aaPredicted RBP17.05■□□□□ 0.32
PRKAR2A-202ENST00000296446 PTCH1Q13635 1447 aa17.05■□□□□ 0.32
PRKAR2A-202ENST00000296446 ERC2O15083 957 aa17.04■□□□□ 0.32
PRKAR2A-202ENST00000296446 NRXN3Q9Y4C0 1643 aa17.04■□□□□ 0.32
PRKAR2A-202ENST00000296446 RRP9O43818 475 aaKnown RBP17.04■□□□□ 0.32
PRKAR2A-202ENST00000296446 REC8O95072 547 aa17.04■□□□□ 0.32
PRKAR2A-202ENST00000296446 KIF20BQ96Q89 1820 aa17.04■□□□□ 0.32
PRKAR2A-202ENST00000296446 CRB1P82279 1406 aa17.04■□□□□ 0.32
PRKAR2A-202ENST00000296446 RIMS1Q86UR5 1692 aaKnown RBP17.04■□□□□ 0.32
PRKAR2A-202ENST00000296446 ESPNB1AK53 854 aa17.04■□□□□ 0.32
PRKAR2A-202ENST00000296446 ST18O60284 1047 aa17.04■□□□□ 0.32
PRKAR2A-202ENST00000296446 RBM25P49756 843 aaKnown RBP17.04■□□□□ 0.32
PRKAR2A-202ENST00000296446 USP26Q9BXU7 913 aa17.04■□□□□ 0.32
PRKAR2A-202ENST00000296446 PALD1Q9ULE6 856 aa17.04■□□□□ 0.32
PRKAR2A-202ENST00000296446 EIF4A1P60842 406 aaKnown RBP17.03■□□□□ 0.32
PRKAR2A-202ENST00000296446 GBP4Q96PP9 640 aa17.03■□□□□ 0.32
PRKAR2A-202ENST00000296446 GRPEL1Q9HAV7 217 aa17.03■□□□□ 0.32
PRKAR2A-202ENST00000296446 KCNH5Q8NCM2 988 aa17.03■□□□□ 0.32
PRKAR2A-202ENST00000296446 GDPD2Q9HCC8 539 aa17.03■□□□□ 0.32
PRKAR2A-202ENST00000296446 ARHGEF10O15013 1369 aa17.02■□□□□ 0.32
PRKAR2A-202ENST00000296446 TECPR2O15040 1411 aa17.01■□□□□ 0.31
PRKAR2A-202ENST00000296446 ATP8B2P98198 1209 aa17.01■□□□□ 0.31
PRKAR2A-202ENST00000296446 SOS1Q07889 1333 aaPredicted RBP17.01■□□□□ 0.31
PRKAR2A-202ENST00000296446 GOLGA6L22H0YM25 854 aa17.01■□□□□ 0.31
PRKAR2A-202ENST00000296446 TTC5Q8N0Z6 440 aa17.01■□□□□ 0.31
PRKAR2A-202ENST00000296446 TCEANC2Q96MN5 208 aa17.01■□□□□ 0.31
PRKAR2A-202ENST00000296446 PRPF40AO75400 957 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms