RNA–Protein interactions for RNA: ENST00000296255.7

RPN1-201, Transcript of ribophorin I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPN1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPN1-201ENST00000296255 ST18O60284 1047 aa20.45■□□□□ 0.86
RPN1-201ENST00000296255 EID1Q9Y6B2 187 aa20.45■□□□□ 0.86
RPN1-201ENST00000296255 DDX49Q9Y6V7 483 aaKnown RBP20.45■□□□□ 0.86
RPN1-201ENST00000296255 MCTP1Q6DN14 999 aa20.44■□□□□ 0.86
RPN1-201ENST00000296255 PNMA6EA0A0J9YXQ4 647 aa20.44■□□□□ 0.86
RPN1-201ENST00000296255 HTATSF1O43719 755 aaKnown RBP20.44■□□□□ 0.86
RPN1-201ENST00000296255 NECTIN2Q92692 538 aa20.44■□□□□ 0.86
RPN1-201ENST00000296255 NWD1Q149M9 1564 aa20.43■□□□□ 0.86
RPN1-201ENST00000296255 CWC22Q9HCG8 908 aaKnown RBP20.43■□□□□ 0.86
RPN1-201ENST00000296255 TBX22Q9Y458 520 aa20.43■□□□□ 0.86
RPN1-201ENST00000296255 ERBB4Q15303 1308 aa20.43■□□□□ 0.86
RPN1-201ENST00000296255 GNAT3A8MTJ3 354 aa20.43■□□□□ 0.86
RPN1-201ENST00000296255 FKBP5Q13451 457 aaPredicted RBP20.43■□□□□ 0.86
RPN1-201ENST00000296255 ZDHHC9Q9Y397 364 aa20.43■□□□□ 0.86
RPN1-201ENST00000296255 MARF1Q9Y4F3 1742 aaKnown RBP20.42■□□□□ 0.86
RPN1-201ENST00000296255 CCDC30Q5VVM6 783 aa20.42■□□□□ 0.86
RPN1-201ENST00000296255 LMBRD1Q9NUN5 540 aa20.42■□□□□ 0.86
RPN1-201ENST00000296255 IBTKQ9P2D0 1353 aaPredicted RBP20.42■□□□□ 0.86
RPN1-201ENST00000296255 ARHGAP23Q9P227 1491 aa20.42■□□□□ 0.86
RPN1-201ENST00000296255 SLIT1O75093 1534 aa20.42■□□□□ 0.86
RPN1-201ENST00000296255 NLRP6P59044 892 aa20.42■□□□□ 0.86
RPN1-201ENST00000296255 IL17REQ8NFR9 667 aa20.42■□□□□ 0.86
RPN1-201ENST00000296255 LRRCC1Q9C099 1032 aa20.42■□□□□ 0.86
RPN1-201ENST00000296255 HOXC9P31274 260 aa20.41■□□□□ 0.86
RPN1-201ENST00000296255 ATP8B2P98198 1209 aa20.41■□□□□ 0.86
RPN1-201ENST00000296255 GNAI3P08754 354 aa20.41■□□□□ 0.86
RPN1-201ENST00000296255 NUTM2GQ5VZR2 741 aa20.41■□□□□ 0.86
RPN1-201ENST00000296255 ESYT1Q9BSJ8 1104 aa20.4■□□□□ 0.86
RPN1-201ENST00000296255 MX1P20591 662 aa20.39■□□□□ 0.86
RPN1-201ENST00000296255 ESPNB1AK53 854 aa20.39■□□□□ 0.85
RPN1-201ENST00000296255 LRRFIP2Q9Y608 721 aaKnown RBP20.39■□□□□ 0.85
RPN1-201ENST00000296255 N4BP2Q86UW6 1770 aaPredicted RBP20.38■□□□□ 0.85
RPN1-201ENST00000296255 MAP3K5Q99683 1374 aa20.38■□□□□ 0.85
RPN1-201ENST00000296255 NEK4P51957 841 aa20.37■□□□□ 0.85
RPN1-201ENST00000296255 PALD1Q9ULE6 856 aa20.37■□□□□ 0.85
RPN1-201ENST00000296255 CACNA1FO60840 1977 aa20.37■□□□□ 0.85
RPN1-201ENST00000296255 USP44Q9H0E7 712 aa20.37■□□□□ 0.85
RPN1-201ENST00000296255 CHMLP26374 656 aa20.36■□□□□ 0.85
RPN1-201ENST00000296255 ZNF445P59923 1031 aa20.36■□□□□ 0.85
RPN1-201ENST00000296255 TAF7Q15545 349 aaPredicted RBP20.36■□□□□ 0.85
RPN1-201ENST00000296255 CAVIN1Q6NZI2 390 aaKnown RBP20.36■□□□□ 0.85
RPN1-201ENST00000296255 CHAMP1Q96JM3 812 aa20.36■□□□□ 0.85
RPN1-201ENST00000296255 STAP2Q9UGK3 403 aa20.36■□□□□ 0.85
RPN1-201ENST00000296255 NASPP49321 788 aaPredicted RBP20.36■□□□□ 0.85
RPN1-201ENST00000296255 LTV1Q96GA3 475 aaPredicted RBP20.36■□□□□ 0.85
RPN1-201ENST00000296255 TMX3Q96JJ7 454 aa20.36■□□□□ 0.85
RPN1-201ENST00000296255 ZSCAN23Q3MJ62 389 aa20.35■□□□□ 0.85
RPN1-201ENST00000296255 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
RPN1-201ENST00000296255 UNC5CLQ8IV45 518 aa20.35■□□□□ 0.85
RPN1-201ENST00000296255 NCLP19338 710 aaKnown RBP20.35■□□□□ 0.85
RPN1-201ENST00000296255 PPP1R9BQ96SB3 815 aa20.35■□□□□ 0.85
RPN1-201ENST00000296255 PXDNLA1KZ92 1463 aa20.34■□□□□ 0.85
RPN1-201ENST00000296255 PRPF40AO75400 957 aaKnown RBP20.34■□□□□ 0.85
RPN1-201ENST00000296255 GPT2Q8TD30 523 aa20.34■□□□□ 0.85
RPN1-201ENST00000296255 RILPL2Q969X0 211 aa20.34■□□□□ 0.85
RPN1-201ENST00000296255 TRIM44Q96DX7 344 aaPredicted RBP20.34■□□□□ 0.85
RPN1-201ENST00000296255 ANKARQ7Z5J8 1434 aa20.34■□□□□ 0.85
RPN1-201ENST00000296255 SOS1Q07889 1333 aaPredicted RBP20.34■□□□□ 0.85
RPN1-201ENST00000296255 USP54Q70EL1 1684 aa20.34■□□□□ 0.85
RPN1-201ENST00000296255 TRIM6-TRIM34B2RNG4 842 aa20.33■□□□□ 0.85
RPN1-201ENST00000296255 PHAXQ9H814 394 aaKnown RBP20.33■□□□□ 0.85
RPN1-201ENST00000296255 USHBP1Q8N6Y0 703 aa20.33■□□□□ 0.84
RPN1-201ENST00000296255 BABAM1Q9NWV8 329 aa20.33■□□□□ 0.84
RPN1-201ENST00000296255 CCDC173Q0VFZ6 552 aa20.32■□□□□ 0.84
RPN1-201ENST00000296255 KCNA6P17658 529 aa20.32■□□□□ 0.84
RPN1-201ENST00000296255 ABTB2Q8N961 1025 aa20.32■□□□□ 0.84
RPN1-201ENST00000296255 ANO2Q9NQ90 1003 aa20.32■□□□□ 0.84
RPN1-201ENST00000296255 UBTFL1P0CB47 393 aaPredicted RBP20.31■□□□□ 0.84
RPN1-201ENST00000296255 SSH3Q8TE77 659 aa20.31■□□□□ 0.84
RPN1-201ENST00000296255 SRCIN1Q9C0H9 1055 aa20.31■□□□□ 0.84
RPN1-201ENST00000296255 CUL4AQ13619 759 aa20.31■□□□□ 0.84
RPN1-201ENST00000296255 HDGFL1Q5TGJ6 251 aa20.31■□□□□ 0.84
RPN1-201ENST00000296255 IL25Q9H293 177 aa20.31■□□□□ 0.84
RPN1-201ENST00000296255 IL1RAPL2Q9NP60 686 aa20.31■□□□□ 0.84
RPN1-201ENST00000296255 RBM27Q9P2N5 1060 aaKnown RBP20.31■□□□□ 0.84
RPN1-201ENST00000296255 ANAPC15P60006 121 aa20.3■□□□□ 0.84
RPN1-201ENST00000296255 FOXD4L5Q5VV16 416 aaPredicted RBP20.3■□□□□ 0.84
RPN1-201ENST00000296255 FOXD4L4Q8WXT5 416 aaPredicted RBP20.3■□□□□ 0.84
RPN1-201ENST00000296255 NAP1L5Q96NT1 182 aaPredicted RBP20.3■□□□□ 0.84
RPN1-201ENST00000296255 MCM2P49736 904 aa20.3■□□□□ 0.84
RPN1-201ENST00000296255 IL17RAQ96F46 866 aa20.3■□□□□ 0.84
RPN1-201ENST00000296255 MCCP23508 829 aa20.29■□□□□ 0.84
RPN1-201ENST00000296255 NUTM1Q86Y26 1132 aa20.28■□□□□ 0.84
RPN1-201ENST00000296255 THEMISQ8N1K5 641 aaPredicted RBP20.28■□□□□ 0.84
RPN1-201ENST00000296255 RBSNQ9H1K0 784 aa20.28■□□□□ 0.84
RPN1-201ENST00000296255 AOX1Q06278 1338 aa20.28■□□□□ 0.84
RPN1-201ENST00000296255 PPP1R42Q7Z4L9 355 aa20.28■□□□□ 0.84
RPN1-201ENST00000296255 NSFL1CQ9UNZ2 370 aaKnown RBP20.28■□□□□ 0.84
RPN1-201ENST00000296255 CEMIPQ8WUJ3 1361 aa20.27■□□□□ 0.84
RPN1-201ENST00000296255 POLA2Q14181 598 aa20.27■□□□□ 0.84
RPN1-201ENST00000296255 NOL8Q76FK4 1167 aaKnown RBP20.27■□□□□ 0.84
RPN1-201ENST00000296255 BRD1O95696 1058 aa20.27■□□□□ 0.84
RPN1-201ENST00000296255 PRIM1P49642 420 aaKnown RBP20.27■□□□□ 0.84
RPN1-201ENST00000296255 LTN1O94822 1766 aa20.27■□□□□ 0.83
RPN1-201ENST00000296255 UPF3BQ9BZI7 483 aaKnown RBP20.26■□□□□ 0.83
RPN1-201ENST00000296255 TMEM63CQ9P1W3 806 aa20.26■□□□□ 0.83
RPN1-201ENST00000296255 SURF6O75683 361 aaKnown RBP20.25■□□□□ 0.83
RPN1-201ENST00000296255 LGR6Q9HBX8 967 aa20.25■□□□□ 0.83
RPN1-201ENST00000296255 MED1Q15648 1581 aaPredicted RBP20.25■□□□□ 0.83
RPN1-201ENST00000296255 MAP4K4O95819 1239 aaPredicted RBP20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms