RNA–Protein interactions for RNA: ENST00000296145.5

TDGF1-201, Transcript of teratocarcinoma-derived growth factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TDGF1, Length 2,513 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDGF1-201ENST00000296145 PNPLA6Q8IY17 1366 aa11.6□□□□□ -0.55
TDGF1-201ENST00000296145 NCLP19338 710 aaKnown RBP11.6□□□□□ -0.55
TDGF1-201ENST00000296145 SSTR3P32745 418 aaPredicted RBP11.6□□□□□ -0.55
TDGF1-201ENST00000296145 EXOSC9Q06265 439 aaKnown RBP11.6□□□□□ -0.55
TDGF1-201ENST00000296145 DZIP1LQ8IYY4 767 aaKnown RBP11.6□□□□□ -0.55
TDGF1-201ENST00000296145 ALKQ9UM73 1620 aa11.6□□□□□ -0.55
TDGF1-201ENST00000296145 OSBPP22059 807 aa11.59□□□□□ -0.55
TDGF1-201ENST00000296145 IL16Q14005 1332 aa11.59□□□□□ -0.55
TDGF1-201ENST00000296145 ARHGEF40Q8TER5 1519 aa11.59□□□□□ -0.55
TDGF1-201ENST00000296145 CDK19Q9BWU1 502 aa11.59□□□□□ -0.55
TDGF1-201ENST00000296145 FTSJ3Q8IY81 847 aaKnown RBP11.58□□□□□ -0.56
TDGF1-201ENST00000296145 SSH1Q8WYL5 1049 aa11.58□□□□□ -0.56
TDGF1-201ENST00000296145 DIAPH1O60610 1272 aaKnown RBP11.58□□□□□ -0.56
TDGF1-201ENST00000296145 TRIM27P14373 513 aa11.58□□□□□ -0.56
TDGF1-201ENST00000296145 HDGFL2Q7Z4V5 671 aaPredicted RBP11.58□□□□□ -0.56
TDGF1-201ENST00000296145 SECISBP2LQ93073 1101 aaKnown RBP11.58□□□□□ -0.56
TDGF1-201ENST00000296145 TMUB1Q9BVT8 246 aa11.58□□□□□ -0.56
TDGF1-201ENST00000296145 SMC4Q9NTJ3 1288 aa11.58□□□□□ -0.56
TDGF1-201ENST00000296145 CABP1Q9NZU7 370 aa11.58□□□□□ -0.56
TDGF1-201ENST00000296145 SCNN1AP37088 669 aa11.57□□□□□ -0.56
TDGF1-201ENST00000296145 RIPK4P57078 832 aa11.57□□□□□ -0.56
TDGF1-201ENST00000296145 CNPY4Q8N129 248 aa11.57□□□□□ -0.56
TDGF1-201ENST00000296145 LMOD1P29536 600 aaPredicted RBP11.57□□□□□ -0.56
TDGF1-201ENST00000296145 PPP1R12CQ9BZL4 782 aa11.57□□□□□ -0.56
TDGF1-201ENST00000296145 KIF20BQ96Q89 1820 aa11.56□□□□□ -0.56
TDGF1-201ENST00000296145 FRAT2O75474 233 aaPredicted RBP11.56□□□□□ -0.56
TDGF1-201ENST00000296145 ATF7IPQ6VMQ6 1270 aa11.56□□□□□ -0.56
TDGF1-201ENST00000296145 LIMD1Q9UGP4 676 aa11.56□□□□□ -0.56
TDGF1-201ENST00000296145 HDAC1Q13547 482 aaPredicted RBP11.55□□□□□ -0.56
TDGF1-201ENST00000296145 PNNQ9H307 717 aaKnown RBP11.55□□□□□ -0.56
TDGF1-201ENST00000296145 DDX19BQ9UMR2 479 aa11.55□□□□□ -0.56
TDGF1-201ENST00000296145 PALM3A6NDB9 673 aaPredicted RBP11.55□□□□□ -0.56
TDGF1-201ENST00000296145 FCHSD2O94868 740 aa11.55□□□□□ -0.56
TDGF1-201ENST00000296145 CLK2P49760 499 aaKnown RBP11.55□□□□□ -0.56
TDGF1-201ENST00000296145 TICAM2Q86XR7 235 aa11.55□□□□□ -0.56
TDGF1-201ENST00000296145 DDX12PQ92771 950 aa11.55□□□□□ -0.56
TDGF1-201ENST00000296145 TBC1D32Q96NH3 1257 aa11.55□□□□□ -0.56
TDGF1-201ENST00000296145 NOB1Q9ULX3 412 aaKnown RBP11.55□□□□□ -0.56
TDGF1-201ENST00000296145 CDC42BPGQ6DT37 1551 aa11.54□□□□□ -0.56
TDGF1-201ENST00000296145 BECN1Q14457 450 aa11.54□□□□□ -0.56
TDGF1-201ENST00000296145 NAALADL2Q58DX5 795 aa11.54□□□□□ -0.56
TDGF1-201ENST00000296145 PHLDB3Q6NSJ2 640 aa11.54□□□□□ -0.56
TDGF1-201ENST00000296145 UCN2Q96RP3 112 aa11.54□□□□□ -0.56
TDGF1-201ENST00000296145 CLEC11AQ9Y240 323 aa11.54□□□□□ -0.56
TDGF1-201ENST00000296145 DSG2Q14126 1118 aa11.54□□□□□ -0.56
TDGF1-201ENST00000296145 DLC1Q96QB1 1528 aa11.54□□□□□ -0.56
TDGF1-201ENST00000296145 ITPRIPQ8IWB1 547 aa11.53□□□□□ -0.56
TDGF1-201ENST00000296145 UPF2Q9HAU5 1272 aaKnown RBP11.53□□□□□ -0.56
TDGF1-201ENST00000296145 POLKQ9UBT6 870 aa11.53□□□□□ -0.56
TDGF1-201ENST00000296145 ZC3H4Q9UPT8 1303 aaKnown RBP11.53□□□□□ -0.56
TDGF1-201ENST00000296145 WAPLQ7Z5K2 1190 aa11.53□□□□□ -0.56
TDGF1-201ENST00000296145 GNEQ9Y223 722 aaKnown RBP11.53□□□□□ -0.56
TDGF1-201ENST00000296145 LRRC7Q96NW7 1537 aa11.53□□□□□ -0.56
TDGF1-201ENST00000296145 MAP2P11137 1827 aaKnown RBP11.53□□□□□ -0.56
TDGF1-201ENST00000296145 A2ML1A8K2U0 1454 aa11.52□□□□□ -0.56
TDGF1-201ENST00000296145 ATP7BP35670 1465 aa11.52□□□□□ -0.56
TDGF1-201ENST00000296145 RAB11FIP3O75154 756 aa11.52□□□□□ -0.56
TDGF1-201ENST00000296145 FBLN1P23142 703 aa11.52□□□□□ -0.56
TDGF1-201ENST00000296145 CC2D2BQ6DHV5 1058 aa11.52□□□□□ -0.56
TDGF1-201ENST00000296145 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.52□□□□□ -0.56
TDGF1-201ENST00000296145 MICAL1Q8TDZ2 1067 aa11.52□□□□□ -0.56
TDGF1-201ENST00000296145 ZBTB40Q9NUA8 1239 aa11.52□□□□□ -0.56
TDGF1-201ENST00000296145 FAM135BQ49AJ0 1406 aa11.52□□□□□ -0.57
TDGF1-201ENST00000296145 GTF2E1P29083 439 aaPredicted RBP11.52□□□□□ -0.57
TDGF1-201ENST00000296145 ALDH1L2Q3SY69 923 aa11.52□□□□□ -0.57
TDGF1-201ENST00000296145 SMC5Q8IY18 1101 aa11.52□□□□□ -0.57
TDGF1-201ENST00000296145 TMEM57Q8N5G2 664 aa11.52□□□□□ -0.57
TDGF1-201ENST00000296145 GPCPD1Q9NPB8 672 aa11.52□□□□□ -0.57
TDGF1-201ENST00000296145 SETD1AO15047 1707 aaKnown RBP11.52□□□□□ -0.57
TDGF1-201ENST00000296145 KIF16BQ96L93 1317 aa11.52□□□□□ -0.57
TDGF1-201ENST00000296145 IPO8O15397 1037 aaKnown RBP11.51□□□□□ -0.57
TDGF1-201ENST00000296145 PRKAR2BP31323 418 aa11.51□□□□□ -0.57
TDGF1-201ENST00000296145 PRDM10Q9NQV6 1147 aa11.51□□□□□ -0.57
TDGF1-201ENST00000296145 REREQ9P2R6 1566 aa11.51□□□□□ -0.57
TDGF1-201ENST00000296145 AGLP35573 1532 aa11.51□□□□□ -0.57
TDGF1-201ENST00000296145 PTGDRQ13258 359 aa11.51□□□□□ -0.57
TDGF1-201ENST00000296145 DNAJC2Q99543 621 aaKnown RBP11.51□□□□□ -0.57
TDGF1-201ENST00000296145 DSG3P32926 999 aa11.5□□□□□ -0.57
TDGF1-201ENST00000296145 C9orf131Q5VYM1 1079 aa11.5□□□□□ -0.57
TDGF1-201ENST00000296145 CYB5RLQ6IPT4 315 aa11.5□□□□□ -0.57
TDGF1-201ENST00000296145 ANTXR1Q9H6X2 564 aa11.5□□□□□ -0.57
TDGF1-201ENST00000296145 SPATA31D1Q6ZQQ2 1576 aa11.5□□□□□ -0.57
TDGF1-201ENST00000296145 PPIP5K1Q6PFW1 1433 aa11.5□□□□□ -0.57
TDGF1-201ENST00000296145 RIMS2Q9UQ26 1411 aa11.5□□□□□ -0.57
TDGF1-201ENST00000296145 RECKO95980 971 aa11.5□□□□□ -0.57
TDGF1-201ENST00000296145 FAM69CQ0P6D2 419 aa11.5□□□□□ -0.57
TDGF1-201ENST00000296145 IFNL1Q8IU54 200 aa11.5□□□□□ -0.57
TDGF1-201ENST00000296145 GPATCH3Q96I76 525 aa11.5□□□□□ -0.57
TDGF1-201ENST00000296145 CPSF1Q10570 1443 aaKnown RBP11.49□□□□□ -0.57
TDGF1-201ENST00000296145 RIMBP3CA6NJZ7 1639 aa11.49□□□□□ -0.57
TDGF1-201ENST00000296145 RIMBP3BA6NNM3 1639 aa11.49□□□□□ -0.57
TDGF1-201ENST00000296145 RIMBP3Q9UFD9 1639 aa11.49□□□□□ -0.57
TDGF1-201ENST00000296145 LOC102724159A0A0B4J2E5 919 aa11.49□□□□□ -0.57
TDGF1-201ENST00000296145 PWP2Q15269 919 aaKnown RBP11.49□□□□□ -0.57
TDGF1-201ENST00000296145 CSPP1Q1MSJ5 1256 aa11.49□□□□□ -0.57
TDGF1-201ENST00000296145 PHACTR3Q96KR7 559 aa11.49□□□□□ -0.57
TDGF1-201ENST00000296145 TBC1D2Q9BYX2 928 aa11.49□□□□□ -0.57
TDGF1-201ENST00000296145 SOX12O15370 315 aa11.49□□□□□ -0.57
TDGF1-201ENST00000296145 DPH6Q7L8W6 267 aa11.49□□□□□ -0.57
TDGF1-201ENST00000296145 STK32AQ8WU08 396 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms