RNA–Protein interactions for RNA: ENST00000295984.7

PRRT3-201, Transcript of proline rich transmembrane protein 3, humanhuman

TSL 1 (best)

Gene PRRT3, Length 3,368 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRT3-201ENST00000295984 LUZP1Q86V48 1076 aa18.38■□□□□ 0.53
PRRT3-201ENST00000295984 AEBP1Q8IUX7 1158 aa18.38■□□□□ 0.53
PRRT3-201ENST00000295984 NPATQ14207 1427 aa18.38■□□□□ 0.53
PRRT3-201ENST00000295984 CDK11BP21127 795 aaKnown RBP18.38■□□□□ 0.53
PRRT3-201ENST00000295984 ARHGAP45Q92619 1136 aa18.38■□□□□ 0.53
PRRT3-201ENST00000295984 POLKQ9UBT6 870 aa18.38■□□□□ 0.53
PRRT3-201ENST00000295984 MX1P20591 662 aa18.38■□□□□ 0.53
PRRT3-201ENST00000295984 KCNJ4P48050 445 aa18.38■□□□□ 0.53
PRRT3-201ENST00000295984 CCDC186Q7Z3E2 898 aa18.38■□□□□ 0.53
PRRT3-201ENST00000295984 KIAA1524Q8TCG1 905 aa18.38■□□□□ 0.53
PRRT3-201ENST00000295984 ESYT1Q9BSJ8 1104 aa18.38■□□□□ 0.53
PRRT3-201ENST00000295984 KIF20AO95235 890 aa18.37■□□□□ 0.53
PRRT3-201ENST00000295984 WDR33Q9C0J8 1336 aaKnown RBP18.36■□□□□ 0.53
PRRT3-201ENST00000295984 YEATS2Q9ULM3 1422 aa18.36■□□□□ 0.53
PRRT3-201ENST00000295984 TRHP20396 242 aaPredicted RBP18.36■□□□□ 0.53
PRRT3-201ENST00000295984 NUTM1Q86Y26 1132 aa18.36■□□□□ 0.53
PRRT3-201ENST00000295984 ZBTB9Q96C00 473 aa18.36■□□□□ 0.53
PRRT3-201ENST00000295984 TRPM2O94759 1503 aa18.35■□□□□ 0.53
PRRT3-201ENST00000295984 G2E3Q7L622 706 aa18.35■□□□□ 0.53
PRRT3-201ENST00000295984 FBXW7Q969H0 707 aa18.35■□□□□ 0.53
PRRT3-201ENST00000295984 MSH6P52701 1360 aa18.35■□□□□ 0.53
PRRT3-201ENST00000295984 FAM184AQ8NB25 1140 aa18.35■□□□□ 0.53
PRRT3-201ENST00000295984 SYTL4Q96C24 671 aaPredicted RBP18.35■□□□□ 0.53
PRRT3-201ENST00000295984 ABCA6Q8N139 1617 aa18.35■□□□□ 0.53
PRRT3-201ENST00000295984 TCHHQ07283 1943 aa18.35■□□□□ 0.53
PRRT3-201ENST00000295984 SYT1P21579 422 aa18.34■□□□□ 0.53
PRRT3-201ENST00000295984 SULT6B1Q6IMI4 303 aa18.34■□□□□ 0.53
PRRT3-201ENST00000295984 CCDC83Q8IWF9 413 aa18.34■□□□□ 0.53
PRRT3-201ENST00000295984 RPAP2Q8IXW5 612 aaPredicted RBP18.34■□□□□ 0.53
PRRT3-201ENST00000295984 ST7Q9NRC1 585 aa18.34■□□□□ 0.53
PRRT3-201ENST00000295984 SPHKAPQ2M3C7 1700 aa18.34■□□□□ 0.53
PRRT3-201ENST00000295984 NCBP1Q09161 790 aaKnown RBP18.33■□□□□ 0.53
PRRT3-201ENST00000295984 TNNT1P13805 278 aa18.33■□□□□ 0.52
PRRT3-201ENST00000295984 GTF2F1P35269 517 aaKnown RBP eCLIP18.33■□□□□ 0.52
PRRT3-201ENST00000295984 RTF1Q92541 710 aaKnown RBP18.33■□□□□ 0.52
PRRT3-201ENST00000295984 CFAP44Q96MT7 982 aa18.33■□□□□ 0.52
PRRT3-201ENST00000295984 TRIM5Q9C035 493 aa18.33■□□□□ 0.52
PRRT3-201ENST00000295984 SPG7Q9UQ90 795 aa18.33■□□□□ 0.52
PRRT3-201ENST00000295984 SMC3Q9UQE7 1217 aa18.33■□□□□ 0.52
PRRT3-201ENST00000295984 TPD52L1Q16890 204 aaPredicted RBP18.32■□□□□ 0.52
PRRT3-201ENST00000295984 TMEM51Q9NW97 253 aa18.32■□□□□ 0.52
PRRT3-201ENST00000295984 STX6O43752 255 aa18.31■□□□□ 0.52
PRRT3-201ENST00000295984 CHMLP26374 656 aa18.31■□□□□ 0.52
PRRT3-201ENST00000295984 SPTLC3Q9NUV7 552 aa18.31■□□□□ 0.52
PRRT3-201ENST00000295984 TRMT1Q9NXH9 659 aaKnown RBP18.31■□□□□ 0.52
PRRT3-201ENST00000295984 TFIP11Q9UBB9 837 aaKnown RBP18.31■□□□□ 0.52
PRRT3-201ENST00000295984 CUL4AQ13619 759 aa18.31■□□□□ 0.52
PRRT3-201ENST00000295984 UVSSAQ2YD98 709 aa18.31■□□□□ 0.52
PRRT3-201ENST00000295984 NECAB1Q8N987 351 aa18.31■□□□□ 0.52
PRRT3-201ENST00000295984 CHMP4AQ9BY43 222 aa18.31■□□□□ 0.52
PRRT3-201ENST00000295984 ZSCAN22P10073 491 aaPredicted RBP18.3■□□□□ 0.52
PRRT3-201ENST00000295984 SHROOM2Q13796 1616 aa18.3■□□□□ 0.52
PRRT3-201ENST00000295984 LMOD2Q6P5Q4 547 aa18.3■□□□□ 0.52
PRRT3-201ENST00000295984 NAP1L2Q9ULW6 460 aaPredicted RBP18.3■□□□□ 0.52
PRRT3-201ENST00000295984 HMMRO75330 724 aa18.3■□□□□ 0.52
PRRT3-201ENST00000295984 PNMA6EA0A0J9YXQ4 647 aa18.3■□□□□ 0.52
PRRT3-201ENST00000295984 LARGE1O95461 756 aa18.3■□□□□ 0.52
PRRT3-201ENST00000295984 UBE2HP62256 183 aa18.3■□□□□ 0.52
PRRT3-201ENST00000295984 TCEANC2Q96MN5 208 aa18.3■□□□□ 0.52
PRRT3-201ENST00000295984 A0A087WWV3 80 aa18.29■□□□□ 0.52
PRRT3-201ENST00000295984 MCM2P49736 904 aa18.29■□□□□ 0.52
PRRT3-201ENST00000295984 AK2P54819 239 aa18.29■□□□□ 0.52
PRRT3-201ENST00000295984 MED14O60244 1454 aa18.29■□□□□ 0.52
PRRT3-201ENST00000295984 FOXO3O43524 673 aa18.29■□□□□ 0.52
PRRT3-201ENST00000295984 ARID5BQ14865 1188 aa18.29■□□□□ 0.52
PRRT3-201ENST00000295984 CWC27Q6UX04 472 aaKnown RBP18.29■□□□□ 0.52
PRRT3-201ENST00000295984 COG3Q96JB2 828 aa18.29■□□□□ 0.52
PRRT3-201ENST00000295984 RTL1A6NKG5 1358 aa18.29■□□□□ 0.52
PRRT3-201ENST00000295984 SBNO2Q9Y2G9 1366 aa18.28■□□□□ 0.52
PRRT3-201ENST00000295984 GOLGA6L6A8MZA4 724 aa18.28■□□□□ 0.52
PRRT3-201ENST00000295984 RASEFQ8IZ41 740 aa18.28■□□□□ 0.52
PRRT3-201ENST00000295984 CCDC112Q8NEF3 446 aa18.28■□□□□ 0.52
PRRT3-201ENST00000295984 LRRCC1Q9C099 1032 aa18.27■□□□□ 0.52
PRRT3-201ENST00000295984 MAP3K4Q9Y6R4 1608 aa18.27■□□□□ 0.52
PRRT3-201ENST00000295984 GOLGA6L4A6NEF3 574 aa18.27■□□□□ 0.51
PRRT3-201ENST00000295984 ANKRD7Q92527 254 aa18.27■□□□□ 0.51
PRRT3-201ENST00000295984 PTCH1Q13635 1447 aa18.26■□□□□ 0.51
PRRT3-201ENST00000295984 LIG1P18858 919 aa18.26■□□□□ 0.51
PRRT3-201ENST00000295984 CASTP20810 708 aaKnown RBP18.26■□□□□ 0.51
PRRT3-201ENST00000295984 GJB2P29033 226 aa18.26■□□□□ 0.51
PRRT3-201ENST00000295984 BRPF1P55201 1214 aaPredicted RBP18.26■□□□□ 0.51
PRRT3-201ENST00000295984 OGFRQ9NZT2 677 aa18.26■□□□□ 0.51
PRRT3-201ENST00000295984 F13A1P00488 732 aa18.26■□□□□ 0.51
PRRT3-201ENST00000295984 CCDC192P0DO97 292 aa18.26■□□□□ 0.51
PRRT3-201ENST00000295984 FOSBP53539 338 aa18.26■□□□□ 0.51
PRRT3-201ENST00000295984 CEBPZQ03701 1054 aaKnown RBP18.26■□□□□ 0.51
PRRT3-201ENST00000295984 INTS4Q96HW7 963 aaKnown RBP18.25■□□□□ 0.51
PRRT3-201ENST00000295984 SLC52A1Q9NWF4 448 aa18.25■□□□□ 0.51
PRRT3-201ENST00000295984 ANO6Q4KMQ2 910 aa18.25■□□□□ 0.51
PRRT3-201ENST00000295984 NCBP3Q53F19 620 aaKnown RBP18.25■□□□□ 0.51
PRRT3-201ENST00000295984 CTNNA3Q9UI47 895 aa18.25■□□□□ 0.51
PRRT3-201ENST00000295984 ZNF853P0CG23 659 aa18.25■□□□□ 0.51
PRRT3-201ENST00000295984 FILIP1Q7Z7B0 1213 aa18.25■□□□□ 0.51
PRRT3-201ENST00000295984 ARHGAP31Q2M1Z3 1444 aa18.25■□□□□ 0.51
PRRT3-201ENST00000295984 PPFIA3O75145 1194 aa18.24■□□□□ 0.51
PRRT3-201ENST00000295984 HSP90AB2PQ58FF8 381 aa18.24■□□□□ 0.51
PRRT3-201ENST00000295984 RUFY3Q7L099 469 aa18.24■□□□□ 0.51
PRRT3-201ENST00000295984 NSD2O96028 1365 aa18.24■□□□□ 0.51
PRRT3-201ENST00000295984 UHRF1BP1LA0JNW5 1464 aa18.23■□□□□ 0.51
PRRT3-201ENST00000295984 ADGRB2O60241 1585 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms