RNA–Protein interactions for RNA: ENST00000295008.8

MRPL55-201, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 632 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-201ENST00000295008 PRIM1P49642 420 aaKnown RBP20.76■□□□□ 0.91
MRPL55-201ENST00000295008 GOLGA2Q08379 1002 aa20.75■□□□□ 0.91
MRPL55-201ENST00000295008 FAM196AQ6ZSG2 479 aa20.75■□□□□ 0.91
MRPL55-201ENST00000295008 NFATC2IPQ8NCF5 419 aa20.75■□□□□ 0.91
MRPL55-201ENST00000295008 SYTL4Q96C24 671 aaPredicted RBP20.75■□□□□ 0.91
MRPL55-201ENST00000295008 IFT57Q9NWB7 429 aa20.75■□□□□ 0.91
MRPL55-201ENST00000295008 TMOD3Q9NYL9 352 aa20.75■□□□□ 0.91
MRPL55-201ENST00000295008 LAS1LQ9Y4W2 734 aaKnown RBP20.75■□□□□ 0.91
MRPL55-201ENST00000295008 TAF7Q15545 349 aaPredicted RBP20.74■□□□□ 0.91
MRPL55-201ENST00000295008 SPINK5Q9NQ38 1064 aaPredicted RBP20.74■□□□□ 0.91
MRPL55-201ENST00000295008 BTAF1O14981 1849 aa20.74■□□□□ 0.91
MRPL55-201ENST00000295008 KCNQ2O43526 872 aa20.73■□□□□ 0.91
MRPL55-201ENST00000295008 ZNF853P0CG23 659 aa20.73■□□□□ 0.91
MRPL55-201ENST00000295008 PIGBQ92521 554 aa20.73■□□□□ 0.91
MRPL55-201ENST00000295008 GNAI1P63096 354 aa20.72■□□□□ 0.91
MRPL55-201ENST00000295008 CDCA7LQ96GN5 454 aa20.72■□□□□ 0.91
MRPL55-201ENST00000295008 CFAP44Q96MT7 982 aa20.72■□□□□ 0.91
MRPL55-201ENST00000295008 MIS18AQ9NYP9 233 aa20.72■□□□□ 0.91
MRPL55-201ENST00000295008 UBR2Q8IWV8 1755 aa20.72■□□□□ 0.91
MRPL55-201ENST00000295008 TNS1Q9HBL0 1735 aaKnown RBP20.71■□□□□ 0.91
MRPL55-201ENST00000295008 BTBD11A6QL63 1104 aa20.71■□□□□ 0.91
MRPL55-201ENST00000295008 E9PSI1 815 aa20.71■□□□□ 0.91
MRPL55-201ENST00000295008 CHL1O00533 1208 aa20.71■□□□□ 0.91
MRPL55-201ENST00000295008 TSPYL4Q9UJ04 414 aa20.71■□□□□ 0.91
MRPL55-201ENST00000295008 SLFN5Q08AF3 891 aa20.7■□□□□ 0.9
MRPL55-201ENST00000295008 PTF1AQ7RTS3 328 aa20.7■□□□□ 0.9
MRPL55-201ENST00000295008 TSR2Q969E8 191 aaKnown RBP20.7■□□□□ 0.9
MRPL55-201ENST00000295008 MBIPQ9NS73 344 aa20.7■□□□□ 0.9
MRPL55-201ENST00000295008 FANCIQ9NVI1 1328 aa20.7■□□□□ 0.9
MRPL55-201ENST00000295008 KCPQ6ZWJ8 1503 aa20.69■□□□□ 0.9
MRPL55-201ENST00000295008 MYH16Q9H6N6 1097 aa20.69■□□□□ 0.9
MRPL55-201ENST00000295008 BABAM1Q9NWV8 329 aa20.69■□□□□ 0.9
MRPL55-201ENST00000295008 SLC39A6Q13433 755 aa20.68■□□□□ 0.9
MRPL55-201ENST00000295008 KCNQ3O43525 872 aa20.67■□□□□ 0.9
MRPL55-201ENST00000295008 TRIM37O94972 964 aa20.67■□□□□ 0.9
MRPL55-201ENST00000295008 BCL11BQ9C0K0 894 aaPredicted RBP20.67■□□□□ 0.9
MRPL55-201ENST00000295008 ZNF790Q6PG37 636 aa20.66■□□□□ 0.9
MRPL55-201ENST00000295008 TRMT2AQ8IZ69 625 aaKnown RBP20.66■□□□□ 0.9
MRPL55-201ENST00000295008 ATG3Q9NT62 314 aa20.66■□□□□ 0.9
MRPL55-201ENST00000295008 ASAP1Q9ULH1 1129 aa20.66■□□□□ 0.9
MRPL55-201ENST00000295008 DUSP27Q5VZP5 1158 aa20.65■□□□□ 0.9
MRPL55-201ENST00000295008 TTC5Q8N0Z6 440 aa20.65■□□□□ 0.9
MRPL55-201ENST00000295008 C5P01031 1676 aa20.64■□□□□ 0.9
MRPL55-201ENST00000295008 PALLDQ8WX93 1383 aa20.64■□□□□ 0.89
MRPL55-201ENST00000295008 LY75O60449 1722 aa20.63■□□□□ 0.89
MRPL55-201ENST00000295008 KAT6BQ8WYB5 2073 aa20.63■□□□□ 0.89
MRPL55-201ENST00000295008 EIF4A1P60842 406 aaKnown RBP20.62■□□□□ 0.89
MRPL55-201ENST00000295008 TJP1Q07157 1748 aa20.61■□□□□ 0.89
MRPL55-201ENST00000295008 CICQ96RK0 1608 aaPredicted RBP20.61■□□□□ 0.89
MRPL55-201ENST00000295008 KRT24Q2M2I5 525 aa20.61■□□□□ 0.89
MRPL55-201ENST00000295008 SMARCC1Q92922 1105 aaPredicted RBP20.61■□□□□ 0.89
MRPL55-201ENST00000295008 ZNF496Q96IT1 587 aaPredicted RBP20.61■□□□□ 0.89
MRPL55-201ENST00000295008 LAMB4A4D0S4 1761 aa20.61■□□□□ 0.89
MRPL55-201ENST00000295008 PTCD1O75127 700 aaKnown RBP20.6■□□□□ 0.89
MRPL55-201ENST00000295008 EXOSC9Q06265 439 aaKnown RBP20.6■□□□□ 0.89
MRPL55-201ENST00000295008 FMNL2Q96PY5 1086 aa20.6■□□□□ 0.89
MRPL55-201ENST00000295008 ZNF831Q5JPB2 1677 aa20.6■□□□□ 0.89
MRPL55-201ENST00000295008 HEG1Q9ULI3 1381 aa20.59■□□□□ 0.89
MRPL55-201ENST00000295008 RGPD3A6NKT7 1758 aaPredicted RBP20.59■□□□□ 0.89
MRPL55-201ENST00000295008 RGPD4Q7Z3J3 1758 aa20.59■□□□□ 0.89
MRPL55-201ENST00000295008 C8orf58Q8NAV2 365 aa20.58■□□□□ 0.89
MRPL55-201ENST00000295008 RBM42Q9BTD8 480 aaKnown RBP20.58■□□□□ 0.89
MRPL55-201ENST00000295008 TSPYL6Q8N831 410 aa20.57■□□□□ 0.88
MRPL55-201ENST00000295008 APBA3O96018 575 aa20.56■□□□□ 0.88
MRPL55-201ENST00000295008 SLC4A9Q96Q91 983 aa20.56■□□□□ 0.88
MRPL55-201ENST00000295008 LOC102724428A0A0B4J2F2 783 aa20.55■□□□□ 0.88
MRPL55-201ENST00000295008 PRAMEF22A3QJZ6 481 aa20.55■□□□□ 0.88
MRPL55-201ENST00000295008 ELL2O00472 640 aaPredicted RBP20.55■□□□□ 0.88
MRPL55-201ENST00000295008 GIGYF1O75420 1035 aaPredicted RBP20.55■□□□□ 0.88
MRPL55-201ENST00000295008 SIK1P57059 783 aa20.55■□□□□ 0.88
MRPL55-201ENST00000295008 TWISTNBQ3B726 338 aaPredicted RBP20.55■□□□□ 0.88
MRPL55-201ENST00000295008 UPF1Q92900 1129 aaKnown RBP eCLIP20.55■□□□□ 0.88
MRPL55-201ENST00000295008 COL5A3P25940 1745 aaPredicted RBP20.55■□□□□ 0.88
MRPL55-201ENST00000295008 EP400Q96L91 3159 aa20.54■□□□□ 0.88
MRPL55-201ENST00000295008 VSIG10Q8N0Z9 540 aa20.54■□□□□ 0.88
MRPL55-201ENST00000295008 SNRPA1P09661 255 aaKnown RBP20.53■□□□□ 0.88
MRPL55-201ENST00000295008 PLSCR1O15162 318 aa20.52■□□□□ 0.88
MRPL55-201ENST00000295008 HOXB7P09629 217 aa20.52■□□□□ 0.88
MRPL55-201ENST00000295008 SF3B2Q13435 895 aaKnown RBP20.52■□□□□ 0.88
MRPL55-201ENST00000295008 DNAJC10Q8IXB1 793 aa20.52■□□□□ 0.88
MRPL55-201ENST00000295008 SOS1Q07889 1333 aaPredicted RBP20.52■□□□□ 0.87
MRPL55-201ENST00000295008 TAF1LQ8IZX4 1826 aa20.51■□□□□ 0.87
MRPL55-201ENST00000295008 VAMP4O75379 141 aa20.51■□□□□ 0.87
MRPL55-201ENST00000295008 ATP6V1AP38606 617 aa20.51■□□□□ 0.87
MRPL55-201ENST00000295008 ITPK1Q13572 414 aa20.51■□□□□ 0.87
MRPL55-201ENST00000295008 CCNL1Q9UK58 526 aaPredicted RBP20.51■□□□□ 0.87
MRPL55-201ENST00000295008 RREB1Q92766 1687 aa20.51■□□□□ 0.87
MRPL55-201ENST00000295008 KCNQ4P56696 695 aa20.5■□□□□ 0.87
MRPL55-201ENST00000295008 CT47B1P0C2W7 299 aaPredicted RBP20.49■□□□□ 0.87
MRPL55-201ENST00000295008 USP16Q9Y5T5 823 aa20.49■□□□□ 0.87
MRPL55-201ENST00000295008 EIF2S2P20042 333 aaKnown RBP20.48■□□□□ 0.87
MRPL55-201ENST00000295008 BAG6P46379 1132 aa20.48■□□□□ 0.87
MRPL55-201ENST00000295008 TXNRD1Q16881 649 aa20.48■□□□□ 0.87
MRPL55-201ENST00000295008 SLC27A3Q5K4L6 730 aa20.48■□□□□ 0.87
MRPL55-201ENST00000295008 HDGFL1Q5TGJ6 251 aa20.48■□□□□ 0.87
MRPL55-201ENST00000295008 CCDC125Q86Z20 511 aa20.48■□□□□ 0.87
MRPL55-201ENST00000295008 NECTIN2Q92692 538 aa20.48■□□□□ 0.87
MRPL55-201ENST00000295008 TEX13AQ9BXU3 409 aaPredicted RBP20.48■□□□□ 0.87
MRPL55-201ENST00000295008 C4BP0C0L5 1744 aa20.47■□□□□ 0.87
MRPL55-201ENST00000295008 EN1Q05925 392 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms