RNA–Protein interactions for RNA: ENST00000294816.6

LMX1A-201, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMX1A, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-201ENST00000294816 VWDEQ8N2E2 1590 aa12.36□□□□□ -0.43
LMX1A-201ENST00000294816 NPATQ14207 1427 aa12.36□□□□□ -0.43
LMX1A-201ENST00000294816 MCM10Q7L590 875 aa12.36□□□□□ -0.43
LMX1A-201ENST00000294816 MIS18AQ9NYP9 233 aa12.36□□□□□ -0.43
LMX1A-201ENST00000294816 INO80Q9ULG1 1556 aaPredicted RBP12.36□□□□□ -0.43
LMX1A-201ENST00000294816 ATP10DQ9P241 1426 aa12.35□□□□□ -0.43
LMX1A-201ENST00000294816 IFT172Q9UG01 1749 aa12.35□□□□□ -0.43
LMX1A-201ENST00000294816 INTS4Q96HW7 963 aaKnown RBP12.35□□□□□ -0.43
LMX1A-201ENST00000294816 REREQ9P2R6 1566 aa12.35□□□□□ -0.43
LMX1A-201ENST00000294816 NME9Q86XW9 330 aa12.35□□□□□ -0.43
LMX1A-201ENST00000294816 PNPLA6Q8IY17 1366 aa12.34□□□□□ -0.43
LMX1A-201ENST00000294816 ZCCHC11Q5TAX3 1644 aaKnown RBP12.34□□□□□ -0.43
LMX1A-201ENST00000294816 GTF2F1P35269 517 aaKnown RBP eCLIP12.34□□□□□ -0.43
LMX1A-201ENST00000294816 NEURL4Q96JN8 1562 aa12.34□□□□□ -0.43
LMX1A-201ENST00000294816 GOLGA6L6A8MZA4 724 aa12.33□□□□□ -0.43
LMX1A-201ENST00000294816 CHMLP26374 656 aa12.33□□□□□ -0.43
LMX1A-201ENST00000294816 SMC3Q9UQE7 1217 aa12.33□□□□□ -0.43
LMX1A-201ENST00000294816 RIMS2Q9UQ26 1411 aa12.33□□□□□ -0.43
LMX1A-201ENST00000294816 LETM1O95202 739 aaPredicted RBP12.33□□□□□ -0.44
LMX1A-201ENST00000294816 IL13P35225 146 aa12.33□□□□□ -0.44
LMX1A-201ENST00000294816 NECTIN2Q92692 538 aa12.33□□□□□ -0.44
LMX1A-201ENST00000294816 LRRCC1Q9C099 1032 aa12.33□□□□□ -0.44
LMX1A-201ENST00000294816 KNDC1Q76NI1 1749 aa12.33□□□□□ -0.44
LMX1A-201ENST00000294816 UBE2HP62256 183 aa12.33□□□□□ -0.44
LMX1A-201ENST00000294816 IL1RAPL2Q9NP60 686 aa12.33□□□□□ -0.44
LMX1A-201ENST00000294816 SPTLC3Q9NUV7 552 aa12.33□□□□□ -0.44
LMX1A-201ENST00000294816 ZFYVE9O95405 1425 aa12.32□□□□□ -0.44
LMX1A-201ENST00000294816 VPS37CA5D8V6 355 aaPredicted RBP12.32□□□□□ -0.44
LMX1A-201ENST00000294816 SOX12O15370 315 aa12.32□□□□□ -0.44
LMX1A-201ENST00000294816 ZSCAN22P10073 491 aaPredicted RBP12.32□□□□□ -0.44
LMX1A-201ENST00000294816 IDI1Q13907 227 aa12.32□□□□□ -0.44
LMX1A-201ENST00000294816 AEBP1Q8IUX7 1158 aa12.32□□□□□ -0.44
LMX1A-201ENST00000294816 KIAA1524Q8TCG1 905 aa12.32□□□□□ -0.44
LMX1A-201ENST00000294816 C16orf45Q96MC5 204 aaPredicted RBP12.32□□□□□ -0.44
LMX1A-201ENST00000294816 MROH1Q8NDA8 1641 aa12.32□□□□□ -0.44
LMX1A-201ENST00000294816 KIF20AO95235 890 aa12.32□□□□□ -0.44
LMX1A-201ENST00000294816 PTGS1P23219 599 aa12.32□□□□□ -0.44
LMX1A-201ENST00000294816 HAP1P54257 671 aaPredicted RBP12.32□□□□□ -0.44
LMX1A-201ENST00000294816 G2E3Q7L622 706 aa12.32□□□□□ -0.44
LMX1A-201ENST00000294816 UNC5CLQ8IV45 518 aa12.32□□□□□ -0.44
LMX1A-201ENST00000294816 KCNF1Q9H3M0 494 aa12.32□□□□□ -0.44
LMX1A-201ENST00000294816 STX6O43752 255 aa12.32□□□□□ -0.44
LMX1A-201ENST00000294816 ZNF592Q92610 1267 aa12.32□□□□□ -0.44
LMX1A-201ENST00000294816 CGNQ9P2M7 1197 aaKnown RBP12.32□□□□□ -0.44
LMX1A-201ENST00000294816 STAG3Q9UJ98 1225 aa12.32□□□□□ -0.44
LMX1A-201ENST00000294816 KIF24Q5T7B8 1368 aa12.31□□□□□ -0.44
LMX1A-201ENST00000294816 AP5Z1O43299 807 aa12.31□□□□□ -0.44
LMX1A-201ENST00000294816 CPA1P15085 419 aa12.31□□□□□ -0.44
LMX1A-201ENST00000294816 CAMK4Q16566 473 aa12.31□□□□□ -0.44
LMX1A-201ENST00000294816 SULT6B1Q6IMI4 303 aa12.31□□□□□ -0.44
LMX1A-201ENST00000294816 GNAI2P04899 355 aa12.31□□□□□ -0.44
LMX1A-201ENST00000294816 SYT1P21579 422 aa12.31□□□□□ -0.44
LMX1A-201ENST00000294816 ANAPC15P60006 121 aa12.31□□□□□ -0.44
LMX1A-201ENST00000294816 WAPLQ7Z5K2 1190 aa12.31□□□□□ -0.44
LMX1A-201ENST00000294816 CAMSAP1Q5T5Y3 1602 aa12.31□□□□□ -0.44
LMX1A-201ENST00000294816 DNM1Q05193 864 aaKnown RBP12.3□□□□□ -0.44
LMX1A-201ENST00000294816 NUTM1Q86Y26 1132 aa12.3□□□□□ -0.44
LMX1A-201ENST00000294816 ARHGEF40Q8TER5 1519 aa12.3□□□□□ -0.44
LMX1A-201ENST00000294816 DDX54Q8TDD1 881 aaKnown RBP12.3□□□□□ -0.44
LMX1A-201ENST00000294816 BBXQ8WY36 941 aaPredicted RBP12.3□□□□□ -0.44
LMX1A-201ENST00000294816 PPLO60437 1756 aa12.3□□□□□ -0.44
LMX1A-201ENST00000294816 YTHDC2Q9H6S0 1430 aaKnown RBP12.3□□□□□ -0.44
LMX1A-201ENST00000294816 RGS12O14924 1447 aa12.29□□□□□ -0.44
LMX1A-201ENST00000294816 CCDC83Q8IWF9 413 aa12.29□□□□□ -0.44
LMX1A-201ENST00000294816 COG3Q96JB2 828 aa12.29□□□□□ -0.44
LMX1A-201ENST00000294816 OSBPL3Q9H4L5 887 aa12.29□□□□□ -0.44
LMX1A-201ENST00000294816 ATP6V1DQ9Y5K8 247 aa12.29□□□□□ -0.44
LMX1A-201ENST00000294816 F13A1P00488 732 aa12.29□□□□□ -0.44
LMX1A-201ENST00000294816 CCDC192P0DO97 292 aa12.29□□□□□ -0.44
LMX1A-201ENST00000294816 NAA30Q147X3 362 aaPredicted RBP12.29□□□□□ -0.44
LMX1A-201ENST00000294816 IL25Q9H293 177 aa12.29□□□□□ -0.44
LMX1A-201ENST00000294816 ARHGEF28Q8N1W1 1705 aaKnown RBP12.29□□□□□ -0.44
LMX1A-201ENST00000294816 PTPRCP08575 1304 aa12.29□□□□□ -0.44
LMX1A-201ENST00000294816 PNMA6EA0A0J9YXQ4 647 aa12.29□□□□□ -0.44
LMX1A-201ENST00000294816 AK2P54819 239 aa12.29□□□□□ -0.44
LMX1A-201ENST00000294816 LRMPQ12912 555 aa12.29□□□□□ -0.44
LMX1A-201ENST00000294816 CCDC186Q7Z3E2 898 aa12.29□□□□□ -0.44
LMX1A-201ENST00000294816 CD163L1Q9NR16 1453 aa12.28□□□□□ -0.44
LMX1A-201ENST00000294816 RPAP1Q9BWH6 1393 aaPredicted RBP12.28□□□□□ -0.44
LMX1A-201ENST00000294816 TPM3P06753 285 aa12.28□□□□□ -0.44
LMX1A-201ENST00000294816 CKAP2LQ8IYA6 745 aa12.28□□□□□ -0.44
LMX1A-201ENST00000294816 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.28□□□□□ -0.44
LMX1A-201ENST00000294816 TCHHQ07283 1943 aa12.28□□□□□ -0.44
LMX1A-201ENST00000294816 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.28□□□□□ -0.44
LMX1A-201ENST00000294816 FERMT3Q86UX7 667 aa12.28□□□□□ -0.44
LMX1A-201ENST00000294816 LUZP1Q86V48 1076 aa12.28□□□□□ -0.44
LMX1A-201ENST00000294816 TRIM5Q9C035 493 aa12.27□□□□□ -0.44
LMX1A-201ENST00000294816 ABCC3O15438 1527 aa12.27□□□□□ -0.44
LMX1A-201ENST00000294816 TNNT1P13805 278 aa12.27□□□□□ -0.45
LMX1A-201ENST00000294816 CCT4P50991 539 aaKnown RBP12.27□□□□□ -0.45
LMX1A-201ENST00000294816 TSPYL4Q9UJ04 414 aa12.27□□□□□ -0.45
LMX1A-201ENST00000294816 GOLGA6L4A6NEF3 574 aa12.27□□□□□ -0.45
LMX1A-201ENST00000294816 GJB2P29033 226 aa12.27□□□□□ -0.45
LMX1A-201ENST00000294816 STK31Q9BXU1 1019 aa12.27□□□□□ -0.45
LMX1A-201ENST00000294816 SPG7Q9UQ90 795 aa12.27□□□□□ -0.45
LMX1A-201ENST00000294816 CASTP20810 708 aaKnown RBP12.26□□□□□ -0.45
LMX1A-201ENST00000294816 TPD52L1Q16890 204 aaPredicted RBP12.26□□□□□ -0.45
LMX1A-201ENST00000294816 ANKRD7Q92527 254 aa12.26□□□□□ -0.45
LMX1A-201ENST00000294816 LIMCH1Q9UPQ0 1083 aa12.26□□□□□ -0.45
LMX1A-201ENST00000294816 NCBP1Q09161 790 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms