RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 PFDN4Q9NQP4 134 aa14.45□□□□□ -0.1
SLX4-201ENST00000294008 PDCP20941 246 aa14.45□□□□□ -0.1
SLX4-201ENST00000294008 RRP1P56182 461 aaKnown RBP14.45□□□□□ -0.1
SLX4-201ENST00000294008 LRRC45Q96CN5 670 aa14.45□□□□□ -0.1
SLX4-201ENST00000294008 CFAP100Q494V2 611 aa14.44□□□□□ -0.1
SLX4-201ENST00000294008 CAVIN4Q5BKX8 364 aa14.44□□□□□ -0.1
SLX4-201ENST00000294008 PRDM11Q9NQV5 511 aa14.44□□□□□ -0.1
SLX4-201ENST00000294008 SETD5Q9C0A6 1442 aa14.44□□□□□ -0.1
SLX4-201ENST00000294008 METTL24Q5JXM2 366 aa14.44□□□□□ -0.1
SLX4-201ENST00000294008 VPS36Q86VN1 386 aa14.44□□□□□ -0.1
SLX4-201ENST00000294008 PPP1R9BQ96SB3 815 aa14.44□□□□□ -0.1
SLX4-201ENST00000294008 ACTN2P35609 894 aa14.44□□□□□ -0.1
SLX4-201ENST00000294008 HLTFQ14527 1009 aaKnown RBP eCLIP14.44□□□□□ -0.1
SLX4-201ENST00000294008 SHTN1A0MZ66 631 aa14.44□□□□□ -0.1
SLX4-201ENST00000294008 CDKL5O76039 1030 aa14.43□□□□□ -0.1
SLX4-201ENST00000294008 CPLX3Q8WVH0 158 aa14.43□□□□□ -0.1
SLX4-201ENST00000294008 KCNA4P22459 653 aa14.43□□□□□ -0.1
SLX4-201ENST00000294008 LARP1BQ659C4 914 aaKnown RBP14.43□□□□□ -0.1
SLX4-201ENST00000294008 PRPF31Q8WWY3 499 aaKnown RBP14.43□□□□□ -0.1
SLX4-201ENST00000294008 TRERF1Q96PN7 1200 aa14.43□□□□□ -0.1
SLX4-201ENST00000294008 CAMK4Q16566 473 aa14.43□□□□□ -0.1
SLX4-201ENST00000294008 SPG7Q9UQ90 795 aa14.43□□□□□ -0.1
SLX4-201ENST00000294008 NOP9Q86U38 636 aaKnown RBP14.43□□□□□ -0.1
SLX4-201ENST00000294008 CCDC117Q8IWD4 279 aaPredicted RBP14.43□□□□□ -0.1
SLX4-201ENST00000294008 L3MBTL2Q969R5 705 aa14.43□□□□□ -0.1
SLX4-201ENST00000294008 KIF5CO60282 957 aa14.43□□□□□ -0.1
SLX4-201ENST00000294008 CCDC192P0DO97 292 aa14.43□□□□□ -0.1
SLX4-201ENST00000294008 AKNAD1Q5T1N1 836 aa14.43□□□□□ -0.1
SLX4-201ENST00000294008 ZFP91Q96JP5 570 aaPredicted RBP14.43□□□□□ -0.1
SLX4-201ENST00000294008 HDGFL1Q5TGJ6 251 aa14.42□□□□□ -0.1
SLX4-201ENST00000294008 IPO4Q8TEX9 1081 aaKnown RBP14.42□□□□□ -0.1
SLX4-201ENST00000294008 A0A1W2PRG0 241 aa14.42□□□□□ -0.1
SLX4-201ENST00000294008 CWC27Q6UX04 472 aaKnown RBP14.42□□□□□ -0.1
SLX4-201ENST00000294008 PTCD1O75127 700 aaKnown RBP14.42□□□□□ -0.1
SLX4-201ENST00000294008 SNX16P57768 344 aa14.42□□□□□ -0.1
SLX4-201ENST00000294008 RBM26Q5T8P6 1007 aaKnown RBP14.42□□□□□ -0.1
SLX4-201ENST00000294008 SMC1BQ8NDV3 1235 aa14.42□□□□□ -0.1
SLX4-201ENST00000294008 NAP1L3Q99457 506 aaPredicted RBP14.42□□□□□ -0.1
SLX4-201ENST00000294008 UPF3BQ9BZI7 483 aaKnown RBP14.42□□□□□ -0.1
SLX4-201ENST00000294008 MPHOSPH6Q99547 160 aaKnown RBP14.42□□□□□ -0.1
SLX4-201ENST00000294008 ZNF287Q9HBT7 754 aa14.42□□□□□ -0.1
SLX4-201ENST00000294008 PHLDB1Q86UU1 1377 aa14.42□□□□□ -0.1
SLX4-201ENST00000294008 DAAM2Q86T65 1068 aa14.42□□□□□ -0.1
SLX4-201ENST00000294008 SPATA32Q96LK8 384 aa14.42□□□□□ -0.1
SLX4-201ENST00000294008 PHACTR2O75167 634 aa14.41□□□□□ -0.1
SLX4-201ENST00000294008 ALS2CR12Q96Q35 445 aa14.41□□□□□ -0.1
SLX4-201ENST00000294008 MAP7D1Q3KQU3 841 aa14.41□□□□□ -0.1
SLX4-201ENST00000294008 RUNDC1Q96C34 613 aa14.41□□□□□ -0.1
SLX4-201ENST00000294008 GNAI3P08754 354 aa14.41□□□□□ -0.1
SLX4-201ENST00000294008 CCDC144CPQ8IYA2 1237 aa14.41□□□□□ -0.1
SLX4-201ENST00000294008 GTPBP4Q9BZE4 634 aaKnown RBP14.41□□□□□ -0.1
SLX4-201ENST00000294008 GNAI2P04899 355 aa14.41□□□□□ -0.1
SLX4-201ENST00000294008 PRKCSHP14314 528 aaPredicted RBP14.41□□□□□ -0.1
SLX4-201ENST00000294008 ZNF530Q6P9A1 599 aaPredicted RBP14.4□□□□□ -0.1
SLX4-201ENST00000294008 FAM107BQ9H098 131 aa14.4□□□□□ -0.1
SLX4-201ENST00000294008 GUCY1B3Q02153 619 aa14.4□□□□□ -0.1
SLX4-201ENST00000294008 TMEM266Q2M3C6 531 aa14.4□□□□□ -0.1
SLX4-201ENST00000294008 ZNF526Q8TF50 670 aaPredicted RBP14.4□□□□□ -0.1
SLX4-201ENST00000294008 SREK1Q8WXA9 508 aaKnown RBP14.4□□□□□ -0.1
SLX4-201ENST00000294008 MRVI1Q9Y6F6 885 aa14.4□□□□□ -0.1
SLX4-201ENST00000294008 CEP126Q9P2H0 1117 aa14.4□□□□□ -0.1
SLX4-201ENST00000294008 CEP131Q9UPN4 1083 aa14.4□□□□□ -0.1
SLX4-201ENST00000294008 SEPT6Q14141 434 aa14.4□□□□□ -0.1
SLX4-201ENST00000294008 CCDC144AA2RUR9 1427 aa14.4□□□□□ -0.1
SLX4-201ENST00000294008 SLC4A2P04920 1241 aa14.39□□□□□ -0.11
SLX4-201ENST00000294008 CASQ1P31415 396 aa14.39□□□□□ -0.11
SLX4-201ENST00000294008 IMMTQ16891 758 aaKnown RBP14.39□□□□□ -0.11
SLX4-201ENST00000294008 RPUSD2Q8IZ73 545 aaKnown RBP14.39□□□□□ -0.11
SLX4-201ENST00000294008 GAS2L2Q8NHY3 880 aa14.39□□□□□ -0.11
SLX4-201ENST00000294008 NUP88Q99567 741 aaPredicted RBP14.39□□□□□ -0.11
SLX4-201ENST00000294008 C6orf163Q5TEZ5 329 aa14.39□□□□□ -0.11
SLX4-201ENST00000294008 GPATCH11Q8N954 259 aa14.39□□□□□ -0.11
SLX4-201ENST00000294008 CCDC89Q8N998 374 aa14.39□□□□□ -0.11
SLX4-201ENST00000294008 FBF1Q8TES7 1133 aa14.39□□□□□ -0.11
SLX4-201ENST00000294008 ZNF408Q9H9D4 720 aa14.39□□□□□ -0.11
SLX4-201ENST00000294008 ZC3H6P61129 1189 aaKnown RBP14.39□□□□□ -0.11
SLX4-201ENST00000294008 TMEM132EQ6IEE7 984 aa14.39□□□□□ -0.11
SLX4-201ENST00000294008 UACAQ9BZF9 1416 aa14.39□□□□□ -0.11
SLX4-201ENST00000294008 MYO1BO43795 1136 aa14.39□□□□□ -0.11
SLX4-201ENST00000294008 PPP4R4Q6NUP7 873 aa14.39□□□□□ -0.11
SLX4-201ENST00000294008 AEBP1Q8IUX7 1158 aa14.39□□□□□ -0.11
SLX4-201ENST00000294008 JAKMIP1Q96N16 626 aaKnown RBP14.39□□□□□ -0.11
SLX4-201ENST00000294008 TMEM110-MUSTN1A8MSY1 372 aa14.39□□□□□ -0.11
SLX4-201ENST00000294008 CCDC174Q6PII3 467 aa14.39□□□□□ -0.11
SLX4-201ENST00000294008 ZNF652Q9Y2D9 606 aa14.39□□□□□ -0.11
SLX4-201ENST00000294008 F8W031 263 aaPredicted RBP14.38□□□□□ -0.11
SLX4-201ENST00000294008 BAG4O95429 457 aaKnown RBP14.38□□□□□ -0.11
SLX4-201ENST00000294008 MAATS1Q7Z4T9 603 aa14.38□□□□□ -0.11
SLX4-201ENST00000294008 BEGAINQ9BUH8 593 aa14.38□□□□□ -0.11
SLX4-201ENST00000294008 TAOK3Q9H2K8 898 aa14.38□□□□□ -0.11
SLX4-201ENST00000294008 BTBD11A6QL63 1104 aa14.38□□□□□ -0.11
SLX4-201ENST00000294008 FLIIQ13045 1269 aa14.38□□□□□ -0.11
SLX4-201ENST00000294008 TXNDC2Q86VQ3 553 aa14.38□□□□□ -0.11
SLX4-201ENST00000294008 CETN1Q12798 172 aa14.38□□□□□ -0.11
SLX4-201ENST00000294008 PPP2R5CQ13362 524 aa14.38□□□□□ -0.11
SLX4-201ENST00000294008 CCDC40Q4G0X9 1142 aa14.38□□□□□ -0.11
SLX4-201ENST00000294008 ANKRD1Q15327 319 aa14.37□□□□□ -0.11
SLX4-201ENST00000294008 WASF1Q92558 559 aa14.37□□□□□ -0.11
SLX4-201ENST00000294008 NGLY1Q96IV0 654 aa14.37□□□□□ -0.11
SLX4-201ENST00000294008 CEP135Q66GS9 1140 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms