RNA–Protein interactions for RNA: ENST00000293845.7

CCDC42-201, Transcript of coiled-coil domain containing 42, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC42, Length 1,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-201ENST00000293845 UBR2Q8IWV8 1755 aa17.41■□□□□ 0.38
CCDC42-201ENST00000293845 DCTN1Q14203 1278 aa17.4■□□□□ 0.38
CCDC42-201ENST00000293845 NEUROD2Q15784 382 aa17.4■□□□□ 0.38
CCDC42-201ENST00000293845 CCDC27Q2M243 656 aa17.4■□□□□ 0.38
CCDC42-201ENST00000293845 NFATC2IPQ8NCF5 419 aa17.4■□□□□ 0.38
CCDC42-201ENST00000293845 KDM3BQ7LBC6 1761 aa17.4■□□□□ 0.38
CCDC42-201ENST00000293845 TEFQ10587 303 aa17.4■□□□□ 0.38
CCDC42-201ENST00000293845 SF3B2Q13435 895 aaKnown RBP17.4■□□□□ 0.38
CCDC42-201ENST00000293845 NGEFQ8N5V2 710 aa17.4■□□□□ 0.38
CCDC42-201ENST00000293845 RREB1Q92766 1687 aa17.39■□□□□ 0.37
CCDC42-201ENST00000293845 PLSCR1O15162 318 aa17.39■□□□□ 0.37
CCDC42-201ENST00000293845 APBA3O96018 575 aa17.39■□□□□ 0.37
CCDC42-201ENST00000293845 ZNF831Q5JPB2 1677 aa17.38■□□□□ 0.37
CCDC42-201ENST00000293845 SOCS7O14512 581 aa17.37■□□□□ 0.37
CCDC42-201ENST00000293845 BAG6P46379 1132 aa17.37■□□□□ 0.37
CCDC42-201ENST00000293845 SMARCC1Q92922 1105 aaPredicted RBP17.37■□□□□ 0.37
CCDC42-201ENST00000293845 THUMPD2Q9BTF0 503 aaKnown RBP17.37■□□□□ 0.37
CCDC42-201ENST00000293845 CICQ96RK0 1608 aaPredicted RBP17.37■□□□□ 0.37
CCDC42-201ENST00000293845 PALLDQ8WX93 1383 aa17.36■□□□□ 0.37
CCDC42-201ENST00000293845 ATG3Q9NT62 314 aa17.36■□□□□ 0.37
CCDC42-201ENST00000293845 TAF1LQ8IZX4 1826 aa17.36■□□□□ 0.37
CCDC42-201ENST00000293845 KCPQ6ZWJ8 1503 aa17.35■□□□□ 0.37
CCDC42-201ENST00000293845 TAF7Q15545 349 aaPredicted RBP17.35■□□□□ 0.37
CCDC42-201ENST00000293845 ASAP1Q9ULH1 1129 aa17.35■□□□□ 0.37
CCDC42-201ENST00000293845 NUP188Q5SRE5 1749 aa17.34■□□□□ 0.37
CCDC42-201ENST00000293845 DEFB132Q7Z7B7 95 aa17.34■□□□□ 0.37
CCDC42-201ENST00000293845 WWC1Q8IX03 1113 aa17.34■□□□□ 0.37
CCDC42-201ENST00000293845 CAMKK2Q96RR4 588 aa17.34■□□□□ 0.37
CCDC42-201ENST00000293845 BTBD11A6QL63 1104 aa17.33■□□□□ 0.36
CCDC42-201ENST00000293845 CALD1Q05682 793 aaKnown RBP17.33■□□□□ 0.36
CCDC42-201ENST00000293845 EN1Q05925 392 aaPredicted RBP17.33■□□□□ 0.36
CCDC42-201ENST00000293845 BABAM1Q9NWV8 329 aa17.33■□□□□ 0.36
CCDC42-201ENST00000293845 SENP3-EIF4A1A0A087X0R7 540 aa17.32■□□□□ 0.36
CCDC42-201ENST00000293845 TJP1Q07157 1748 aa17.32■□□□□ 0.36
CCDC42-201ENST00000293845 ZNF521Q96K83 1311 aa17.32■□□□□ 0.36
CCDC42-201ENST00000293845 C5P01031 1676 aa17.31■□□□□ 0.36
CCDC42-201ENST00000293845 COL5A3P25940 1745 aaPredicted RBP17.31■□□□□ 0.36
CCDC42-201ENST00000293845 SLC39A6Q13433 755 aa17.31■□□□□ 0.36
CCDC42-201ENST00000293845 ZNF790Q6PG37 636 aa17.31■□□□□ 0.36
CCDC42-201ENST00000293845 EZH2Q15910 746 aaKnown RBP17.3■□□□□ 0.36
CCDC42-201ENST00000293845 TXNRD1Q16881 649 aa17.3■□□□□ 0.36
CCDC42-201ENST00000293845 SLC27A3Q5K4L6 730 aa17.3■□□□□ 0.36
CCDC42-201ENST00000293845 WDR63Q8IWG1 891 aa17.3■□□□□ 0.36
CCDC42-201ENST00000293845 PROM2Q8N271 834 aa17.3■□□□□ 0.36
CCDC42-201ENST00000293845 IL16Q14005 1332 aa17.3■□□□□ 0.36
CCDC42-201ENST00000293845 LOC102724428A0A0B4J2F2 783 aa17.29■□□□□ 0.36
CCDC42-201ENST00000293845 CHL1O00533 1208 aa17.29■□□□□ 0.36
CCDC42-201ENST00000293845 ZNF853P0CG23 659 aa17.29■□□□□ 0.36
CCDC42-201ENST00000293845 SIK1P57059 783 aa17.29■□□□□ 0.36
CCDC42-201ENST00000293845 TTC5Q8N0Z6 440 aa17.29■□□□□ 0.36
CCDC42-201ENST00000293845 CFAP44Q96MT7 982 aa17.29■□□□□ 0.36
CCDC42-201ENST00000293845 IFT57Q9NWB7 429 aa17.29■□□□□ 0.36
CCDC42-201ENST00000293845 SALL2Q9Y467 1007 aaPredicted RBP17.29■□□□□ 0.36
CCDC42-201ENST00000293845 LAMB4A4D0S4 1761 aa17.28■□□□□ 0.36
CCDC42-201ENST00000293845 KCNQ3O43525 872 aa17.28■□□□□ 0.36
CCDC42-201ENST00000293845 GNAI1P63096 354 aa17.28■□□□□ 0.36
CCDC42-201ENST00000293845 VSIG10Q8N0Z9 540 aa17.28■□□□□ 0.36
CCDC42-201ENST00000293845 SLC4A9Q96Q91 983 aa17.28■□□□□ 0.36
CCDC42-201ENST00000293845 MIS18AQ9NYP9 233 aa17.28■□□□□ 0.36
CCDC42-201ENST00000293845 TSPYL4Q9UJ04 414 aa17.28■□□□□ 0.36
CCDC42-201ENST00000293845 CCNL1Q9UK58 526 aaPredicted RBP17.28■□□□□ 0.36
CCDC42-201ENST00000293845 PTCD1O75127 700 aaKnown RBP17.27■□□□□ 0.35
CCDC42-201ENST00000293845 ZNF496Q96IT1 587 aaPredicted RBP17.27■□□□□ 0.35
CCDC42-201ENST00000293845 FMNL2Q96PY5 1086 aa17.27■□□□□ 0.35
CCDC42-201ENST00000293845 LRRC4BQ9NT99 713 aa17.27■□□□□ 0.35
CCDC42-201ENST00000293845 HEG1Q9ULI3 1381 aa17.27■□□□□ 0.35
CCDC42-201ENST00000293845 C4BP0C0L5 1744 aa17.26■□□□□ 0.35
CCDC42-201ENST00000293845 HMGB2P26583 209 aaKnown RBP17.26■□□□□ 0.35
CCDC42-201ENST00000293845 RBM42Q9BTD8 480 aaKnown RBP17.26■□□□□ 0.35
CCDC42-201ENST00000293845 MYH14Q7Z406 1995 aaKnown RBP17.25■□□□□ 0.35
CCDC42-201ENST00000293845 ATP6V1AP38606 617 aa17.25■□□□□ 0.35
CCDC42-201ENST00000293845 EIF4A1P60842 406 aaKnown RBP17.25■□□□□ 0.35
CCDC42-201ENST00000293845 HNRNPUQ00839 825 aaKnown RBP eCLIP17.25■□□□□ 0.35
CCDC42-201ENST00000293845 MBIPQ9NS73 344 aa17.25■□□□□ 0.35
CCDC42-201ENST00000293845 QSER1Q2KHR3 1735 aa17.24■□□□□ 0.35
CCDC42-201ENST00000293845 ITPK1Q13572 414 aa17.24■□□□□ 0.35
CCDC42-201ENST00000293845 LAS1LQ9Y4W2 734 aaKnown RBP17.24■□□□□ 0.35
CCDC42-201ENST00000293845 TUBGCP6Q96RT7 1819 aa17.23■□□□□ 0.35
CCDC42-201ENST00000293845 KCNQ4P56696 695 aa17.23■□□□□ 0.35
CCDC42-201ENST00000293845 UBR3Q6ZT12 1888 aa17.23■□□□□ 0.35
CCDC42-201ENST00000293845 ZBED9Q6R2W3 1325 aa17.21■□□□□ 0.35
CCDC42-201ENST00000293845 SNRPA1P09661 255 aaKnown RBP17.21■□□□□ 0.35
CCDC42-201ENST00000293845 GOLGA2Q08379 1002 aa17.21■□□□□ 0.35
CCDC42-201ENST00000293845 LINC00116Q8NCU8 138 aa17.21■□□□□ 0.35
CCDC42-201ENST00000293845 TEX13AQ9BXU3 409 aaPredicted RBP17.21■□□□□ 0.35
CCDC42-201ENST00000293845 SPINK5Q9NQ38 1064 aaPredicted RBP17.21■□□□□ 0.35
CCDC42-201ENST00000293845 CNTNAP4Q9C0A0 1308 aa17.2■□□□□ 0.34
CCDC42-201ENST00000293845 FANCIQ9NVI1 1328 aa17.2■□□□□ 0.34
CCDC42-201ENST00000293845 GIGYF1O75420 1035 aaPredicted RBP17.2■□□□□ 0.34
CCDC42-201ENST00000293845 DNAJC10Q8IXB1 793 aa17.2■□□□□ 0.34
CCDC42-201ENST00000293845 TSR2Q969E8 191 aaKnown RBP17.19■□□□□ 0.34
CCDC42-201ENST00000293845 MYH16Q9H6N6 1097 aa17.19■□□□□ 0.34
CCDC42-201ENST00000293845 E9PSI1 815 aa17.18■□□□□ 0.34
CCDC42-201ENST00000293845 HOXB7P09629 217 aa17.18■□□□□ 0.34
CCDC42-201ENST00000293845 CYP19A1P11511 503 aaPredicted RBP17.18■□□□□ 0.34
CCDC42-201ENST00000293845 AKT1S1Q96B36 256 aa17.18■□□□□ 0.34
CCDC42-201ENST00000293845 ANO8Q9HCE9 1232 aaPredicted RBP17.18■□□□□ 0.34
CCDC42-201ENST00000293845 PRAMEF22A3QJZ6 481 aa17.17■□□□□ 0.34
CCDC42-201ENST00000293845 SLFN5Q08AF3 891 aa17.17■□□□□ 0.34
CCDC42-201ENST00000293845 RC3H1Q5TC82 1133 aaKnown RBP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms