RNA–Protein interactions for RNA: ENST00000293362.7

PSME3-201, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,144 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-201ENST00000293362 KIAA0232Q92628 1395 aa12.76□□□□□ -0.37
PSME3-201ENST00000293362 ERBB3P21860 1342 aa12.76□□□□□ -0.37
PSME3-201ENST00000293362 NPHP3Q7Z494 1330 aa12.75□□□□□ -0.37
PSME3-201ENST00000293362 NUCB1Q02818 461 aa12.75□□□□□ -0.37
PSME3-201ENST00000293362 RTL1A6NKG5 1358 aa12.75□□□□□ -0.37
PSME3-201ENST00000293362 KIF24Q5T7B8 1368 aa12.75□□□□□ -0.37
PSME3-201ENST00000293362 PIP4K2AP48426 406 aaPredicted RBP12.75□□□□□ -0.37
PSME3-201ENST00000293362 CCDC30Q5VVM6 783 aa12.75□□□□□ -0.37
PSME3-201ENST00000293362 INTS3Q68E01 1043 aaKnown RBP12.75□□□□□ -0.37
PSME3-201ENST00000293362 OTUD7AQ8TE49 926 aaPredicted RBP12.75□□□□□ -0.37
PSME3-201ENST00000293362 RAPGEF4Q8WZA2 1011 aa12.75□□□□□ -0.37
PSME3-201ENST00000293362 CHPF2Q9P2E5 772 aa12.75□□□□□ -0.37
PSME3-201ENST00000293362 PXDNQ92626 1479 aa12.75□□□□□ -0.37
PSME3-201ENST00000293362 RGS12O14924 1447 aa12.74□□□□□ -0.37
PSME3-201ENST00000293362 HTATSF1O43719 755 aaKnown RBP12.74□□□□□ -0.37
PSME3-201ENST00000293362 SLAIN2Q9P270 581 aa12.74□□□□□ -0.37
PSME3-201ENST00000293362 RNMTO43148 476 aaKnown RBP12.74□□□□□ -0.37
PSME3-201ENST00000293362 EIF4A1P60842 406 aaKnown RBP12.73□□□□□ -0.37
PSME3-201ENST00000293362 AKAP4Q5JQC9 854 aa12.73□□□□□ -0.37
PSME3-201ENST00000293362 STRN4Q9NRL3 753 aa12.73□□□□□ -0.37
PSME3-201ENST00000293362 PRDM11Q9NQV5 511 aa12.73□□□□□ -0.37
PSME3-201ENST00000293362 PROSER3Q2NL68 480 aa12.72□□□□□ -0.37
PSME3-201ENST00000293362 CEP85Q6P2H3 762 aa12.72□□□□□ -0.37
PSME3-201ENST00000293362 NFATC2IPQ8NCF5 419 aa12.72□□□□□ -0.37
PSME3-201ENST00000293362 PTPRCP08575 1304 aa12.72□□□□□ -0.37
PSME3-201ENST00000293362 AIMP1Q12904 312 aaKnown RBP12.72□□□□□ -0.37
PSME3-201ENST00000293362 SPRYD3Q8NCJ5 442 aa12.72□□□□□ -0.37
PSME3-201ENST00000293362 EXOC6BQ9Y2D4 811 aa12.71□□□□□ -0.37
PSME3-201ENST00000293362 TSHZ3Q63HK5 1081 aa12.71□□□□□ -0.37
PSME3-201ENST00000293362 SPATA31A3Q5VYP0 1347 aa12.71□□□□□ -0.38
PSME3-201ENST00000293362 AMOTQ4VCS5 1084 aa12.71□□□□□ -0.38
PSME3-201ENST00000293362 MED1Q15648 1581 aaPredicted RBP12.7□□□□□ -0.38
PSME3-201ENST00000293362 PI4KAP2A4QPH2 592 aa12.7□□□□□ -0.38
PSME3-201ENST00000293362 PI4KAP1Q8N8J0 262 aa12.7□□□□□ -0.38
PSME3-201ENST00000293362 TOM1L2Q6ZVM7 507 aa12.7□□□□□ -0.38
PSME3-201ENST00000293362 TATP17735 454 aaPredicted RBP12.69□□□□□ -0.38
PSME3-201ENST00000293362 CEMIPQ8WUJ3 1361 aa12.69□□□□□ -0.38
PSME3-201ENST00000293362 LMTK3Q96Q04 1460 aa12.69□□□□□ -0.38
PSME3-201ENST00000293362 CHMP4BQ9H444 224 aaKnown RBP12.69□□□□□ -0.38
PSME3-201ENST00000293362 PNMA6EA0A0J9YXQ4 647 aa12.69□□□□□ -0.38
PSME3-201ENST00000293362 MYL6BP14649 208 aa12.69□□□□□ -0.38
PSME3-201ENST00000293362 ANKRD44Q8N8A2 993 aa12.69□□□□□ -0.38
PSME3-201ENST00000293362 GCC1Q96CN9 775 aa12.69□□□□□ -0.38
PSME3-201ENST00000293362 LRRFIP2Q9Y608 721 aaKnown RBP12.69□□□□□ -0.38
PSME3-201ENST00000293362 RGPD5Q99666 1765 aa12.69□□□□□ -0.38
PSME3-201ENST00000293362 DDX54Q8TDD1 881 aaKnown RBP12.68□□□□□ -0.38
PSME3-201ENST00000293362 UPF2Q9HAU5 1272 aaKnown RBP12.68□□□□□ -0.38
PSME3-201ENST00000293362 CYP27B1O15528 508 aa12.67□□□□□ -0.38
PSME3-201ENST00000293362 CCT4P50991 539 aaKnown RBP12.67□□□□□ -0.38
PSME3-201ENST00000293362 DCTPP1Q9H773 170 aa12.67□□□□□ -0.38
PSME3-201ENST00000293362 NBPF7P0C2Y1 421 aaPredicted RBP12.66□□□□□ -0.38
PSME3-201ENST00000293362 DDRGK1Q96HY6 314 aa12.66□□□□□ -0.38
PSME3-201ENST00000293362 USP44Q9H0E7 712 aa12.66□□□□□ -0.38
PSME3-201ENST00000293362 TNS3Q68CZ2 1445 aa12.66□□□□□ -0.38
PSME3-201ENST00000293362 SLIT3O75094 1523 aa12.66□□□□□ -0.38
PSME3-201ENST00000293362 GIGYF1O75420 1035 aaPredicted RBP12.66□□□□□ -0.38
PSME3-201ENST00000293362 GNAI2P04899 355 aa12.66□□□□□ -0.38
PSME3-201ENST00000293362 SLKQ9H2G2 1235 aaPredicted RBP12.66□□□□□ -0.38
PSME3-201ENST00000293362 ATP10DQ9P241 1426 aa12.66□□□□□ -0.38
PSME3-201ENST00000293362 TRPM3Q9HCF6 1732 aaPredicted RBP12.66□□□□□ -0.38
PSME3-201ENST00000293362 PHKG2P15735 406 aa12.66□□□□□ -0.38
PSME3-201ENST00000293362 JARID2Q92833 1246 aaPredicted RBP12.66□□□□□ -0.38
PSME3-201ENST00000293362 MEGF6O75095 1541 aa12.66□□□□□ -0.38
PSME3-201ENST00000293362 CWF19L2Q2TBE0 894 aaKnown RBP12.65□□□□□ -0.38
PSME3-201ENST00000293362 RPAP2Q8IXW5 612 aaPredicted RBP12.65□□□□□ -0.38
PSME3-201ENST00000293362 GSPT1P15170 499 aaKnown RBP12.65□□□□□ -0.38
PSME3-201ENST00000293362 PLEKHM2Q8IWE5 1019 aa12.65□□□□□ -0.38
PSME3-201ENST00000293362 UBTFL1P0CB47 393 aaPredicted RBP12.64□□□□□ -0.39
PSME3-201ENST00000293362 EVA1CP58658 441 aa12.64□□□□□ -0.39
PSME3-201ENST00000293362 LARP1Q6PKG0 1096 aaKnown RBP12.64□□□□□ -0.39
PSME3-201ENST00000293362 ZNF496Q96IT1 587 aaPredicted RBP12.64□□□□□ -0.39
PSME3-201ENST00000293362 IL1RAPL2Q9NP60 686 aa12.64□□□□□ -0.39
PSME3-201ENST00000293362 ZNF790Q6PG37 636 aa12.64□□□□□ -0.39
PSME3-201ENST00000293362 C22orf23Q9BZE7 217 aa12.64□□□□□ -0.39
PSME3-201ENST00000293362 SPG7Q9UQ90 795 aa12.64□□□□□ -0.39
PSME3-201ENST00000293362 MAP3K2Q9Y2U5 619 aa12.64□□□□□ -0.39
PSME3-201ENST00000293362 SRCIN1Q9C0H9 1055 aa12.64□□□□□ -0.39
PSME3-201ENST00000293362 USP16Q9Y5T5 823 aa12.64□□□□□ -0.39
PSME3-201ENST00000293362 IFNL2Q8IZJ0 200 aa12.63□□□□□ -0.39
PSME3-201ENST00000293362 DNAAF4Q8WXU2 420 aa12.63□□□□□ -0.39
PSME3-201ENST00000293362 TBC1D32Q96NH3 1257 aa12.63□□□□□ -0.39
PSME3-201ENST00000293362 SLC52A2Q9HAB3 445 aa12.63□□□□□ -0.39
PSME3-201ENST00000293362 ANO8Q9HCE9 1232 aaPredicted RBP12.63□□□□□ -0.39
PSME3-201ENST00000293362 PTCD1O75127 700 aaKnown RBP12.62□□□□□ -0.39
PSME3-201ENST00000293362 TBC1D9Q6ZT07 1266 aa12.62□□□□□ -0.39
PSME3-201ENST00000293362 USP54Q70EL1 1684 aa12.62□□□□□ -0.39
PSME3-201ENST00000293362 DBF4Q9UBU7 674 aaPredicted RBP12.62□□□□□ -0.39
PSME3-201ENST00000293362 STRCQ7RTU9 1775 aa12.62□□□□□ -0.39
PSME3-201ENST00000293362 CABP4P57796 275 aa12.62□□□□□ -0.39
PSME3-201ENST00000293362 DCCP43146 1447 aa12.61□□□□□ -0.39
PSME3-201ENST00000293362 A0A0G2JS52 829 aa12.61□□□□□ -0.39
PSME3-201ENST00000293362 HMMRO75330 724 aa12.61□□□□□ -0.39
PSME3-201ENST00000293362 PPP1R42Q7Z4L9 355 aa12.61□□□□□ -0.39
PSME3-201ENST00000293362 BABAM1Q9NWV8 329 aa12.61□□□□□ -0.39
PSME3-201ENST00000293362 KAT6BQ8WYB5 2073 aa12.61□□□□□ -0.39
PSME3-201ENST00000293362 KDM6AO15550 1401 aaPredicted RBP12.61□□□□□ -0.39
PSME3-201ENST00000293362 GNAI3P08754 354 aa12.61□□□□□ -0.39
PSME3-201ENST00000293362 BMP2KLQ5H9B9 411 aa12.61□□□□□ -0.39
PSME3-201ENST00000293362 RTL5Q5HYW3 569 aaPredicted RBP12.61□□□□□ -0.39
PSME3-201ENST00000293362 TTC5Q8N0Z6 440 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms