RNA–Protein interactions for RNA: ENST00000290894.12

SHF-201, Transcript of Src homology 2 domain containing F, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SHF, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-201ENST00000290894 BECN1Q14457 450 aa23.79■■□□□ 1.4
SHF-201ENST00000290894 STRCP1A6NGW2 1772 aa23.79■■□□□ 1.4
SHF-201ENST00000290894 ANXA1P04083 346 aa23.78■■□□□ 1.4
SHF-201ENST00000290894 PLEKHO1Q53GL0 409 aaPredicted RBP23.78■■□□□ 1.4
SHF-201ENST00000290894 RGPD5Q99666 1765 aa23.78■■□□□ 1.4
SHF-201ENST00000290894 FAM208AQ9UK61 1670 aaKnown RBP23.78■■□□□ 1.4
SHF-201ENST00000290894 TBC1D2Q9BYX2 928 aa23.78■■□□□ 1.4
SHF-201ENST00000290894 SLIT3O75094 1523 aa23.78■■□□□ 1.4
SHF-201ENST00000290894 NFKBIBQ15653 356 aa23.77■■□□□ 1.4
SHF-201ENST00000290894 PLEKHM2Q8IWE5 1019 aa23.77■■□□□ 1.4
SHF-201ENST00000290894 BTBD11A6QL63 1104 aa23.77■■□□□ 1.4
SHF-201ENST00000290894 GSPT1P15170 499 aaKnown RBP23.76■■□□□ 1.39
SHF-201ENST00000290894 EIF4A1P60842 406 aaKnown RBP23.76■■□□□ 1.39
SHF-201ENST00000290894 AKAP4Q5JQC9 854 aa23.76■■□□□ 1.39
SHF-201ENST00000290894 C1orf141Q5JVX7 400 aa23.76■■□□□ 1.39
SHF-201ENST00000290894 MST1RQ04912 1400 aa23.76■■□□□ 1.39
SHF-201ENST00000290894 TBC1D9Q6ZT07 1266 aa23.75■■□□□ 1.39
SHF-201ENST00000290894 CHPF2Q9P2E5 772 aa23.74■■□□□ 1.39
SHF-201ENST00000290894 PHRF1Q9P1Y6 1649 aaKnown RBP23.74■■□□□ 1.39
SHF-201ENST00000290894 CHRNA2Q15822 529 aa23.74■■□□□ 1.39
SHF-201ENST00000290894 NLRP2Q9NX02 1062 aa23.74■■□□□ 1.39
SHF-201ENST00000290894 EXOC6BQ9Y2D4 811 aa23.74■■□□□ 1.39
SHF-201ENST00000290894 ERBB3P21860 1342 aa23.73■■□□□ 1.39
SHF-201ENST00000290894 GNAI2P04899 355 aa23.73■■□□□ 1.39
SHF-201ENST00000290894 BABAM1Q9NWV8 329 aa23.73■■□□□ 1.39
SHF-201ENST00000290894 RNMTO43148 476 aaKnown RBP23.72■■□□□ 1.39
SHF-201ENST00000290894 AMOTQ4VCS5 1084 aa23.72■■□□□ 1.39
SHF-201ENST00000290894 MED1Q15648 1581 aaPredicted RBP23.72■■□□□ 1.39
SHF-201ENST00000290894 PRAMEF22A3QJZ6 481 aa23.71■■□□□ 1.39
SHF-201ENST00000290894 PNMA6EA0A0J9YXQ4 647 aa23.71■■□□□ 1.39
SHF-201ENST00000290894 KIF1AQ12756 1690 aa23.7■■□□□ 1.39
SHF-201ENST00000290894 FRAT2O75474 233 aaPredicted RBP23.7■■□□□ 1.38
SHF-201ENST00000290894 LRRFIP2Q9Y608 721 aaKnown RBP23.7■■□□□ 1.38
SHF-201ENST00000290894 HMMRO75330 724 aa23.69■■□□□ 1.38
SHF-201ENST00000290894 TTC22Q5TAA0 569 aa23.68■■□□□ 1.38
SHF-201ENST00000290894 USP44Q9H0E7 712 aa23.68■■□□□ 1.38
SHF-201ENST00000290894 CACNA1FO60840 1977 aa23.68■■□□□ 1.38
SHF-201ENST00000290894 CSB-PGBD3P0DP91 1061 aa23.68■■□□□ 1.38
SHF-201ENST00000290894 TSHZ3Q63HK5 1081 aa23.68■■□□□ 1.38
SHF-201ENST00000290894 LMO7Q8WWI1 1683 aa23.68■■□□□ 1.38
SHF-201ENST00000290894 ALS2Q96Q42 1657 aa23.67■■□□□ 1.38
SHF-201ENST00000290894 CADPS2Q86UW7 1296 aa23.67■■□□□ 1.38
SHF-201ENST00000290894 USP35Q9P2H5 1018 aa23.66■■□□□ 1.38
SHF-201ENST00000290894 PI4KAP2A4QPH2 592 aa23.66■■□□□ 1.38
SHF-201ENST00000290894 GNAI3P08754 354 aa23.66■■□□□ 1.38
SHF-201ENST00000290894 PI4KAP1Q8N8J0 262 aa23.66■■□□□ 1.38
SHF-201ENST00000290894 RAPGEF4Q8WZA2 1011 aa23.66■■□□□ 1.38
SHF-201ENST00000290894 KDM3BQ7LBC6 1761 aa23.65■■□□□ 1.38
SHF-201ENST00000290894 CDC45O75419 566 aa23.65■■□□□ 1.38
SHF-201ENST00000290894 SOS1Q07889 1333 aaPredicted RBP23.65■■□□□ 1.38
SHF-201ENST00000290894 PROSER3Q2NL68 480 aa23.65■■□□□ 1.38
SHF-201ENST00000290894 NPHP3Q7Z494 1330 aa23.64■■□□□ 1.38
SHF-201ENST00000290894 NCAPD2Q15021 1401 aa23.64■■□□□ 1.38
SHF-201ENST00000290894 UBTFL1P0CB47 393 aaPredicted RBP23.64■■□□□ 1.37
SHF-201ENST00000290894 SLC39A6Q13433 755 aa23.64■■□□□ 1.37
SHF-201ENST00000290894 RBM25P49756 843 aaKnown RBP23.63■■□□□ 1.37
SHF-201ENST00000290894 SDSP20132 328 aa23.63■■□□□ 1.37
SHF-201ENST00000290894 NBPF7P0C2Y1 421 aaPredicted RBP23.62■■□□□ 1.37
SHF-201ENST00000290894 SRCIN1Q9C0H9 1055 aa23.62■■□□□ 1.37
SHF-201ENST00000290894 ANTXR1Q9H6X2 564 aa23.62■■□□□ 1.37
SHF-201ENST00000290894 GIGYF1O75420 1035 aaPredicted RBP23.61■■□□□ 1.37
SHF-201ENST00000290894 RBM42Q9BTD8 480 aaKnown RBP23.61■■□□□ 1.37
SHF-201ENST00000290894 ATP8B2P98198 1209 aa23.61■■□□□ 1.37
SHF-201ENST00000290894 DNAAF4Q8WXU2 420 aa23.6■■□□□ 1.37
SHF-201ENST00000290894 KIF2CQ99661 725 aa23.6■■□□□ 1.37
SHF-201ENST00000290894 HOXB7P09629 217 aa23.59■■□□□ 1.37
SHF-201ENST00000290894 DCCP43146 1447 aa23.58■■□□□ 1.37
SHF-201ENST00000290894 TNS3Q68CZ2 1445 aa23.58■■□□□ 1.37
SHF-201ENST00000290894 MEGF6O75095 1541 aa23.58■■□□□ 1.37
SHF-201ENST00000290894 HSCBQ8IWL3 235 aa23.58■■□□□ 1.37
SHF-201ENST00000290894 NFATC2IPQ8NCF5 419 aa23.58■■□□□ 1.37
SHF-201ENST00000290894 TATP17735 454 aaPredicted RBP23.58■■□□□ 1.36
SHF-201ENST00000290894 PDE1AP54750 535 aa23.58■■□□□ 1.36
SHF-201ENST00000290894 BRINP3Q76B58 766 aa23.58■■□□□ 1.36
SHF-201ENST00000290894 LRRCC1Q9C099 1032 aa23.58■■□□□ 1.36
SHF-201ENST00000290894 AIMP1Q12904 312 aaKnown RBP23.57■■□□□ 1.36
SHF-201ENST00000290894 BEND3Q5T5X7 828 aa23.57■■□□□ 1.36
SHF-201ENST00000290894 IL1RAPL2Q9NP60 686 aa23.57■■□□□ 1.36
SHF-201ENST00000290894 DBF4Q9UBU7 674 aaPredicted RBP23.57■■□□□ 1.36
SHF-201ENST00000290894 SPATA31A3Q5VYP0 1347 aa23.57■■□□□ 1.36
SHF-201ENST00000290894 ADCY9O60503 1353 aa23.57■■□□□ 1.36
SHF-201ENST00000290894 CD2BP2O95400 341 aaKnown RBP23.57■■□□□ 1.36
SHF-201ENST00000290894 PPP1R42Q7Z4L9 355 aa23.57■■□□□ 1.36
SHF-201ENST00000290894 CAMTA1Q9Y6Y1 1673 aa23.57■■□□□ 1.36
SHF-201ENST00000290894 ZNF335Q9H4Z2 1342 aaPredicted RBP23.56■■□□□ 1.36
SHF-201ENST00000290894 MAP3K2Q9Y2U5 619 aa23.56■■□□□ 1.36
SHF-201ENST00000290894 PXDNLA1KZ92 1463 aa23.55■■□□□ 1.36
SHF-201ENST00000290894 PHKG2P15735 406 aa23.55■■□□□ 1.36
SHF-201ENST00000290894 KDM6AO15550 1401 aaPredicted RBP23.54■■□□□ 1.36
SHF-201ENST00000290894 SRGAP3O43295 1099 aa23.54■■□□□ 1.36
SHF-201ENST00000290894 CWF19L2Q2TBE0 894 aaKnown RBP23.54■■□□□ 1.36
SHF-201ENST00000290894 IBTKQ9P2D0 1353 aaPredicted RBP23.53■■□□□ 1.36
SHF-201ENST00000290894 PIP4K2AP48426 406 aaPredicted RBP23.53■■□□□ 1.36
SHF-201ENST00000290894 ZNF790Q6PG37 636 aa23.53■■□□□ 1.36
SHF-201ENST00000290894 XIRP1Q702N8 1843 aaKnown RBP23.53■■□□□ 1.36
SHF-201ENST00000290894 SURF6O75683 361 aaKnown RBP23.53■■□□□ 1.36
SHF-201ENST00000290894 SLC52A2Q9HAB3 445 aa23.53■■□□□ 1.36
SHF-201ENST00000290894 SPG7Q9UQ90 795 aa23.53■■□□□ 1.36
SHF-201ENST00000290894 FOXD4L1Q9NU39 408 aa23.52■■□□□ 1.36
SHF-201ENST00000290894 COL18A1P39060 1754 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms