RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 STK31Q9BXU1 1019 aa12.85□□□□□ -0.35
C9orf43-201ENST00000288462 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.85□□□□□ -0.35
C9orf43-201ENST00000288462 COL5A2P05997 1499 aaPredicted RBP12.85□□□□□ -0.35
C9orf43-201ENST00000288462 KDM6AO15550 1401 aaPredicted RBP12.85□□□□□ -0.35
C9orf43-201ENST00000288462 EIF4A1P60842 406 aaKnown RBP12.85□□□□□ -0.35
C9orf43-201ENST00000288462 TEFQ10587 303 aa12.85□□□□□ -0.35
C9orf43-201ENST00000288462 CHRNA2Q15822 529 aa12.85□□□□□ -0.35
C9orf43-201ENST00000288462 MPRIPQ6WCQ1 1025 aa12.85□□□□□ -0.35
C9orf43-201ENST00000288462 RAPGEF4Q8WZA2 1011 aa12.85□□□□□ -0.35
C9orf43-201ENST00000288462 NLRP2Q9NX02 1062 aa12.85□□□□□ -0.35
C9orf43-201ENST00000288462 AHDC1Q5TGY3 1603 aaPredicted RBP12.84□□□□□ -0.35
C9orf43-201ENST00000288462 MSH5O43196 834 aa12.84□□□□□ -0.35
C9orf43-201ENST00000288462 ANP32AP39687 249 aaKnown RBP12.84□□□□□ -0.35
C9orf43-201ENST00000288462 ROBO1Q9Y6N7 1651 aa12.84□□□□□ -0.35
C9orf43-201ENST00000288462 HEG1Q9ULI3 1381 aa12.84□□□□□ -0.35
C9orf43-201ENST00000288462 LTBP4Q8N2S1 1624 aa12.83□□□□□ -0.36
C9orf43-201ENST00000288462 COL22A1Q8NFW1 1626 aaPredicted RBP12.83□□□□□ -0.36
C9orf43-201ENST00000288462 SHANK3Q9BYB0 1731 aa12.83□□□□□ -0.36
C9orf43-201ENST00000288462 TATP17735 454 aaPredicted RBP12.83□□□□□ -0.36
C9orf43-201ENST00000288462 SIRT2Q8IXJ6 389 aa12.83□□□□□ -0.36
C9orf43-201ENST00000288462 C1orf115Q9H7X2 142 aa12.83□□□□□ -0.36
C9orf43-201ENST00000288462 C5P01031 1676 aa12.82□□□□□ -0.36
C9orf43-201ENST00000288462 CSB-PGBD3P0DP91 1061 aa12.82□□□□□ -0.36
C9orf43-201ENST00000288462 NUCB1Q02818 461 aa12.82□□□□□ -0.36
C9orf43-201ENST00000288462 FLIIQ13045 1269 aa12.82□□□□□ -0.36
C9orf43-201ENST00000288462 WDR17Q8IZU2 1322 aa12.82□□□□□ -0.36
C9orf43-201ENST00000288462 BTBD11A6QL63 1104 aa12.82□□□□□ -0.36
C9orf43-201ENST00000288462 CCT4P50991 539 aaKnown RBP12.82□□□□□ -0.36
C9orf43-201ENST00000288462 HDGFL1Q5TGJ6 251 aa12.82□□□□□ -0.36
C9orf43-201ENST00000288462 GCC1Q96CN9 775 aa12.82□□□□□ -0.36
C9orf43-201ENST00000288462 SPG7Q9UQ90 795 aa12.82□□□□□ -0.36
C9orf43-201ENST00000288462 PHKG2P15735 406 aa12.81□□□□□ -0.36
C9orf43-201ENST00000288462 CHMP4AQ9BY43 222 aa12.81□□□□□ -0.36
C9orf43-201ENST00000288462 PRDM11Q9NQV5 511 aa12.81□□□□□ -0.36
C9orf43-201ENST00000288462 KCNQ3O43525 872 aa12.8□□□□□ -0.36
C9orf43-201ENST00000288462 GLI3P10071 1580 aa12.8□□□□□ -0.36
C9orf43-201ENST00000288462 F6X3S4 739 aa12.79□□□□□ -0.36
C9orf43-201ENST00000288462 ANKRD44Q8N8A2 993 aa12.79□□□□□ -0.36
C9orf43-201ENST00000288462 MEIS3Q99687 375 aa12.79□□□□□ -0.36
C9orf43-201ENST00000288462 COL14A1Q05707 1796 aaKnown RBP12.79□□□□□ -0.36
C9orf43-201ENST00000288462 LAMB4A4D0S4 1761 aa12.79□□□□□ -0.36
C9orf43-201ENST00000288462 FKBP5Q13451 457 aaPredicted RBP12.79□□□□□ -0.36
C9orf43-201ENST00000288462 IFNL2Q8IZJ0 200 aa12.79□□□□□ -0.36
C9orf43-201ENST00000288462 NECTIN2Q92692 538 aa12.79□□□□□ -0.36
C9orf43-201ENST00000288462 IPO9Q96P70 1041 aaKnown RBP12.79□□□□□ -0.36
C9orf43-201ENST00000288462 COL16A1Q07092 1604 aaPredicted RBP12.78□□□□□ -0.36
C9orf43-201ENST00000288462 PAPPAQ13219 1627 aa12.78□□□□□ -0.36
C9orf43-201ENST00000288462 CEP85Q6P2H3 762 aa12.78□□□□□ -0.36
C9orf43-201ENST00000288462 CHD1LQ86WJ1 897 aa12.78□□□□□ -0.36
C9orf43-201ENST00000288462 RPAP2Q8IXW5 612 aaPredicted RBP12.78□□□□□ -0.36
C9orf43-201ENST00000288462 SLC52A2Q9HAB3 445 aa12.78□□□□□ -0.36
C9orf43-201ENST00000288462 PLCH1Q4KWH8 1693 aa12.77□□□□□ -0.36
C9orf43-201ENST00000288462 UBR2Q8IWV8 1755 aa12.77□□□□□ -0.37
C9orf43-201ENST00000288462 CYP27B1O15528 508 aa12.77□□□□□ -0.37
C9orf43-201ENST00000288462 GIGYF1O75420 1035 aaPredicted RBP12.77□□□□□ -0.37
C9orf43-201ENST00000288462 NPM2Q86SE8 214 aaKnown RBP12.77□□□□□ -0.37
C9orf43-201ENST00000288462 SLC4A10Q6U841 1118 aa12.76□□□□□ -0.37
C9orf43-201ENST00000288462 DCAF5Q96JK2 942 aa12.76□□□□□ -0.37
C9orf43-201ENST00000288462 CHPF2Q9P2E5 772 aa12.76□□□□□ -0.37
C9orf43-201ENST00000288462 HSP90AB1P08238 724 aaKnown RBP12.76□□□□□ -0.37
C9orf43-201ENST00000288462 LNPKQ9C0E8 428 aa12.76□□□□□ -0.37
C9orf43-201ENST00000288462 DCTPP1Q9H773 170 aa12.76□□□□□ -0.37
C9orf43-201ENST00000288462 WNK3Q9BYP7 1800 aa12.76□□□□□ -0.37
C9orf43-201ENST00000288462 EIF2S2P20042 333 aaKnown RBP12.75□□□□□ -0.37
C9orf43-201ENST00000288462 CARD10Q9BWT7 1032 aa12.75□□□□□ -0.37
C9orf43-201ENST00000288462 PHAXQ9H814 394 aaKnown RBP12.75□□□□□ -0.37
C9orf43-201ENST00000288462 TOGARAM1Q9Y4F4 1720 aa12.75□□□□□ -0.37
C9orf43-201ENST00000288462 TOM1L2Q6ZVM7 507 aa12.74□□□□□ -0.37
C9orf43-201ENST00000288462 DBF4Q9UBU7 674 aaPredicted RBP12.74□□□□□ -0.37
C9orf43-201ENST00000288462 PCDH11XQ9BZA7 1347 aa12.74□□□□□ -0.37
C9orf43-201ENST00000288462 PCDH11YQ9BZA8 1340 aa12.74□□□□□ -0.37
C9orf43-201ENST00000288462 ADCY9O60503 1353 aa12.74□□□□□ -0.37
C9orf43-201ENST00000288462 GNAI3P08754 354 aa12.74□□□□□ -0.37
C9orf43-201ENST00000288462 ZNF790Q6PG37 636 aa12.74□□□□□ -0.37
C9orf43-201ENST00000288462 PHLPP1O60346 1717 aa12.73□□□□□ -0.37
C9orf43-201ENST00000288462 ANKRD45Q5TZF3 282 aa12.73□□□□□ -0.37
C9orf43-201ENST00000288462 NOP58Q9Y2X3 529 aaKnown RBP12.73□□□□□ -0.37
C9orf43-201ENST00000288462 GNAI2P04899 355 aa12.73□□□□□ -0.37
C9orf43-201ENST00000288462 HMMRO75330 724 aa12.71□□□□□ -0.37
C9orf43-201ENST00000288462 SEC24BO95487 1268 aa12.71□□□□□ -0.37
C9orf43-201ENST00000288462 IL2RBP14784 551 aa12.71□□□□□ -0.37
C9orf43-201ENST00000288462 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.37
C9orf43-201ENST00000288462 ZCRB1Q8TBF4 217 aaKnown RBP12.71□□□□□ -0.37
C9orf43-201ENST00000288462 DDRGK1Q96HY6 314 aa12.71□□□□□ -0.37
C9orf43-201ENST00000288462 NRAPQ86VF7 1730 aa12.71□□□□□ -0.37
C9orf43-201ENST00000288462 PRAMEF22A3QJZ6 481 aa12.71□□□□□ -0.38
C9orf43-201ENST00000288462 SLC39A6Q13433 755 aa12.71□□□□□ -0.38
C9orf43-201ENST00000288462 NKX1-1Q15270 411 aaPredicted RBP12.71□□□□□ -0.38
C9orf43-201ENST00000288462 PROSER3Q2NL68 480 aa12.71□□□□□ -0.38
C9orf43-201ENST00000288462 BMP2KLQ5H9B9 411 aa12.71□□□□□ -0.38
C9orf43-201ENST00000288462 LARP1Q6PKG0 1096 aaKnown RBP12.71□□□□□ -0.38
C9orf43-201ENST00000288462 DNAAF4Q8WXU2 420 aa12.71□□□□□ -0.38
C9orf43-201ENST00000288462 ANXA1P04083 346 aa12.7□□□□□ -0.38
C9orf43-201ENST00000288462 SRCIN1Q9C0H9 1055 aa12.7□□□□□ -0.38
C9orf43-201ENST00000288462 USP44Q9H0E7 712 aa12.7□□□□□ -0.38
C9orf43-201ENST00000288462 HYPKQ9NX55 129 aa12.7□□□□□ -0.38
C9orf43-201ENST00000288462 DISP2A7MBM2 1401 aa12.7□□□□□ -0.38
C9orf43-201ENST00000288462 KCPQ6ZWJ8 1503 aa12.7□□□□□ -0.38
C9orf43-201ENST00000288462 TUBGCP6Q96RT7 1819 aa12.7□□□□□ -0.38
C9orf43-201ENST00000288462 PI4KAP2A4QPH2 592 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms