RNA–Protein interactions for RNA: ENST00000281187.9

VPS26B-201, Transcript of VPS26, retromer complex component B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26B, Length 3,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26B-201ENST00000281187 TPM3P06753 285 aa16.98■□□□□ 0.31
VPS26B-201ENST00000281187 AMPHP49418 695 aa16.98■□□□□ 0.31
VPS26B-201ENST00000281187 MAP3K11Q16584 847 aa16.98■□□□□ 0.31
VPS26B-201ENST00000281187 NECAB1Q8N987 351 aa16.98■□□□□ 0.31
VPS26B-201ENST00000281187 FMNL2Q96PY5 1086 aa16.98■□□□□ 0.31
VPS26B-201ENST00000281187 CROCC2H7BZ55 1655 aa16.97■□□□□ 0.31
VPS26B-201ENST00000281187 ZSCAN22P10073 491 aaPredicted RBP16.97■□□□□ 0.31
VPS26B-201ENST00000281187 UVSSAQ2YD98 709 aa16.97■□□□□ 0.31
VPS26B-201ENST00000281187 FAM173BQ6P4H8 233 aa16.97■□□□□ 0.31
VPS26B-201ENST00000281187 TCEANC2Q96MN5 208 aa16.97■□□□□ 0.31
VPS26B-201ENST00000281187 NCOA3Q9Y6Q9 1424 aa16.97■□□□□ 0.31
VPS26B-201ENST00000281187 KRT85P78386 507 aa16.97■□□□□ 0.31
VPS26B-201ENST00000281187 LRRFIP2Q9Y608 721 aaKnown RBP16.97■□□□□ 0.31
VPS26B-201ENST00000281187 CFAP65Q6ZU64 1925 aaKnown RBP16.97■□□□□ 0.31
VPS26B-201ENST00000281187 GJB2P29033 226 aa16.97■□□□□ 0.31
VPS26B-201ENST00000281187 CNTROBQ8N137 903 aa16.97■□□□□ 0.31
VPS26B-201ENST00000281187 CD109Q6YHK3 1445 aa16.96■□□□□ 0.31
VPS26B-201ENST00000281187 CCT4P50991 539 aaKnown RBP16.96■□□□□ 0.31
VPS26B-201ENST00000281187 LUZP1Q86V48 1076 aa16.96■□□□□ 0.31
VPS26B-201ENST00000281187 HOMER1Q86YM7 354 aa16.96■□□□□ 0.31
VPS26B-201ENST00000281187 IDI1Q13907 227 aa16.96■□□□□ 0.31
VPS26B-201ENST00000281187 PRPF40BQ6NWY9 871 aaKnown RBP16.96■□□□□ 0.31
VPS26B-201ENST00000281187 ARHGEF5Q12774 1597 aa16.96■□□□□ 0.3
VPS26B-201ENST00000281187 PDRG1Q9NUG6 133 aa16.95■□□□□ 0.3
VPS26B-201ENST00000281187 MSH6P52701 1360 aa16.95■□□□□ 0.3
VPS26B-201ENST00000281187 SYT1P21579 422 aa16.95■□□□□ 0.3
VPS26B-201ENST00000281187 PYCARDQ9ULZ3 195 aa16.95■□□□□ 0.3
VPS26B-201ENST00000281187 LIMCH1Q9UPQ0 1083 aa16.95■□□□□ 0.3
VPS26B-201ENST00000281187 ATP2B3Q16720 1220 aa16.95■□□□□ 0.3
VPS26B-201ENST00000281187 RUFY2Q8WXA3 655 aa16.95■□□□□ 0.3
VPS26B-201ENST00000281187 SRGAP3O43295 1099 aa16.94■□□□□ 0.3
VPS26B-201ENST00000281187 IFIT2P09913 472 aaKnown RBP16.94■□□□□ 0.3
VPS26B-201ENST00000281187 DMTNQ08495 405 aa16.94■□□□□ 0.3
VPS26B-201ENST00000281187 G2E3Q7L622 706 aa16.94■□□□□ 0.3
VPS26B-201ENST00000281187 CCAR2Q8N163 923 aaKnown RBP16.94■□□□□ 0.3
VPS26B-201ENST00000281187 CYP46A1Q9Y6A2 500 aa16.94■□□□□ 0.3
VPS26B-201ENST00000281187 CHMLP26374 656 aa16.94■□□□□ 0.3
VPS26B-201ENST00000281187 SPATA32Q96LK8 384 aa16.94■□□□□ 0.3
VPS26B-201ENST00000281187 ABCC4O15439 1325 aa16.94■□□□□ 0.3
VPS26B-201ENST00000281187 TXNDC2Q86VQ3 553 aa16.94■□□□□ 0.3
VPS26B-201ENST00000281187 PRDM4Q9UKN5 801 aa16.94■□□□□ 0.3
VPS26B-201ENST00000281187 HTATSF1O43719 755 aaKnown RBP16.93■□□□□ 0.3
VPS26B-201ENST00000281187 PPFIA3O75145 1194 aa16.93■□□□□ 0.3
VPS26B-201ENST00000281187 GPATCH3Q96I76 525 aa16.93■□□□□ 0.3
VPS26B-201ENST00000281187 GTPBP4Q9BZE4 634 aaKnown RBP16.93■□□□□ 0.3
VPS26B-201ENST00000281187 AK2P54819 239 aa16.93■□□□□ 0.3
VPS26B-201ENST00000281187 GNL2Q13823 731 aaKnown RBP16.93■□□□□ 0.3
VPS26B-201ENST00000281187 PLCH2O75038 1416 aa16.93■□□□□ 0.3
VPS26B-201ENST00000281187 CLEC17AQ6ZS10 378 aa16.93■□□□□ 0.3
VPS26B-201ENST00000281187 CLIP2Q9UDT6 1046 aa16.93■□□□□ 0.3
VPS26B-201ENST00000281187 VGLL3A8MV65 326 aa16.92■□□□□ 0.3
VPS26B-201ENST00000281187 CYP2E1P05181 493 aaPredicted RBP16.92■□□□□ 0.3
VPS26B-201ENST00000281187 RAPGEF3O95398 923 aa16.92■□□□□ 0.3
VPS26B-201ENST00000281187 F13A1P00488 732 aa16.92■□□□□ 0.3
VPS26B-201ENST00000281187 LRMPQ12912 555 aa16.92■□□□□ 0.3
VPS26B-201ENST00000281187 SF3A1Q15459 793 aaKnown RBP16.91■□□□□ 0.3
VPS26B-201ENST00000281187 ANO6Q4KMQ2 910 aa16.91■□□□□ 0.3
VPS26B-201ENST00000281187 NUTM2GQ5VZR2 741 aa16.91■□□□□ 0.3
VPS26B-201ENST00000281187 DDX11Q96FC9 970 aa16.91■□□□□ 0.3
VPS26B-201ENST00000281187 C9orf78Q9NZ63 289 aaPredicted RBP16.91■□□□□ 0.3
VPS26B-201ENST00000281187 INTS4Q96HW7 963 aaKnown RBP16.91■□□□□ 0.3
VPS26B-201ENST00000281187 DACT1Q9NYF0 836 aa16.91■□□□□ 0.3
VPS26B-201ENST00000281187 CCDC66A2RUB6 948 aa16.9■□□□□ 0.3
VPS26B-201ENST00000281187 ZNF165P49910 485 aa16.9■□□□□ 0.3
VPS26B-201ENST00000281187 NCKAP5LQ9HCH0 1330 aa16.9■□□□□ 0.3
VPS26B-201ENST00000281187 RPGRIP1LQ68CZ1 1315 aa16.9■□□□□ 0.3
VPS26B-201ENST00000281187 CLASRPQ8N2M8 674 aaKnown RBP16.9■□□□□ 0.3
VPS26B-201ENST00000281187 ZBTB9Q96C00 473 aa16.9■□□□□ 0.3
VPS26B-201ENST00000281187 PTPN14Q15678 1187 aa16.89■□□□□ 0.29
VPS26B-201ENST00000281187 TTC37Q6PGP7 1564 aa16.89■□□□□ 0.29
VPS26B-201ENST00000281187 CCDC30Q5VVM6 783 aa16.89■□□□□ 0.29
VPS26B-201ENST00000281187 PNMA6EA0A0J9YXQ4 647 aa16.89■□□□□ 0.29
VPS26B-201ENST00000281187 UNC5CLQ8IV45 518 aa16.89■□□□□ 0.29
VPS26B-201ENST00000281187 FAM177A1Q8N128 213 aaPredicted RBP16.89■□□□□ 0.29
VPS26B-201ENST00000281187 FOXO3O43524 673 aa16.88■□□□□ 0.29
VPS26B-201ENST00000281187 FAM200AQ8TCP9 573 aa16.88■□□□□ 0.29
VPS26B-201ENST00000281187 SDF4Q9BRK5 362 aa16.88■□□□□ 0.29
VPS26B-201ENST00000281187 DNAJC25Q9H1X3 360 aa16.88■□□□□ 0.29
VPS26B-201ENST00000281187 RAB11FIP3O75154 756 aa16.88■□□□□ 0.29
VPS26B-201ENST00000281187 TYRO3Q06418 890 aa16.88■□□□□ 0.29
VPS26B-201ENST00000281187 FLIIQ13045 1269 aa16.88■□□□□ 0.29
VPS26B-201ENST00000281187 HDGFL1Q5TGJ6 251 aa16.88■□□□□ 0.29
VPS26B-201ENST00000281187 KIF20AO95235 890 aa16.87■□□□□ 0.29
VPS26B-201ENST00000281187 SMC2O95347 1197 aa16.87■□□□□ 0.29
VPS26B-201ENST00000281187 ANAPC15P60006 121 aa16.87■□□□□ 0.29
VPS26B-201ENST00000281187 NAA30Q147X3 362 aaPredicted RBP16.87■□□□□ 0.29
VPS26B-201ENST00000281187 CCDC73Q6ZRK6 1079 aa16.87■□□□□ 0.29
VPS26B-201ENST00000281187 LMOD2Q6P5Q4 547 aa16.87■□□□□ 0.29
VPS26B-201ENST00000281187 NGDNQ8NEJ9 315 aaKnown RBP16.87■□□□□ 0.29
VPS26B-201ENST00000281187 PDCP20941 246 aa16.86■□□□□ 0.29
VPS26B-201ENST00000281187 FSD1Q9BTV5 496 aa16.86■□□□□ 0.29
VPS26B-201ENST00000281187 PTPRCP08575 1304 aa16.86■□□□□ 0.29
VPS26B-201ENST00000281187 ZSCAN20P17040 1043 aaPredicted RBP16.86■□□□□ 0.29
VPS26B-201ENST00000281187 CEP135Q66GS9 1140 aa16.86■□□□□ 0.29
VPS26B-201ENST00000281187 MADDQ8WXG6 1647 aa16.86■□□□□ 0.29
VPS26B-201ENST00000281187 SIL1Q9H173 461 aa16.86■□□□□ 0.29
VPS26B-201ENST00000281187 ABCA8O94911 1581 aa16.86■□□□□ 0.29
VPS26B-201ENST00000281187 SYTL4Q96C24 671 aaPredicted RBP16.85■□□□□ 0.29
VPS26B-201ENST00000281187 NRBP1Q9UHY1 535 aa16.85■□□□□ 0.29
VPS26B-201ENST00000281187 PLXNC1O60486 1568 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms