RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 CCDC87Q9NVE4 849 aa17.19■□□□□ 0.34
MRPS28-201ENST00000276585 MKRN1Q9UHC7 482 aaKnown RBP17.19■□□□□ 0.34
MRPS28-201ENST00000276585 GNPATO15228 680 aa17.18■□□□□ 0.34
MRPS28-201ENST00000276585 TMF1P82094 1093 aa17.18■□□□□ 0.34
MRPS28-201ENST00000276585 AIDAQ96BJ3 306 aa17.18■□□□□ 0.34
MRPS28-201ENST00000276585 KIF13BQ9NQT8 1826 aa17.18■□□□□ 0.34
MRPS28-201ENST00000276585 SLC24A1O60721 1099 aa17.17■□□□□ 0.34
MRPS28-201ENST00000276585 RGPD2P0DJD1 1756 aa17.16■□□□□ 0.34
MRPS28-201ENST00000276585 VEGFAP15692 232 aaPredicted RBP17.16■□□□□ 0.34
MRPS28-201ENST00000276585 CTCFP49711 727 aaPredicted RBP17.16■□□□□ 0.34
MRPS28-201ENST00000276585 MLLT1Q03111 559 aaPredicted RBP17.16■□□□□ 0.34
MRPS28-201ENST00000276585 LINC00116Q8NCU8 138 aa17.16■□□□□ 0.34
MRPS28-201ENST00000276585 ABHD8Q96I13 439 aa17.15■□□□□ 0.34
MRPS28-201ENST00000276585 PIM2Q9P1W9 311 aa17.15■□□□□ 0.34
MRPS28-201ENST00000276585 DALRD3Q5D0E6 543 aaKnown RBP17.14■□□□□ 0.33
MRPS28-201ENST00000276585 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.33
MRPS28-201ENST00000276585 DCAF5Q96JK2 942 aa17.14■□□□□ 0.33
MRPS28-201ENST00000276585 AMPHP49418 695 aa17.13■□□□□ 0.33
MRPS28-201ENST00000276585 NLGN1Q8N2Q7 840 aa17.13■□□□□ 0.33
MRPS28-201ENST00000276585 CGNL1Q0VF96 1302 aa17.13■□□□□ 0.33
MRPS28-201ENST00000276585 ARFGEF1Q9Y6D6 1849 aa17.12■□□□□ 0.33
MRPS28-201ENST00000276585 KCNA3P22001 575 aa17.12■□□□□ 0.33
MRPS28-201ENST00000276585 USHBP1Q8N6Y0 703 aa17.12■□□□□ 0.33
MRPS28-201ENST00000276585 CREBZFQ9NS37 354 aa17.12■□□□□ 0.33
MRPS28-201ENST00000276585 PARP3Q9Y6F1 533 aa17.12■□□□□ 0.33
MRPS28-201ENST00000276585 PCDH11XQ9BZA7 1347 aa17.12■□□□□ 0.33
MRPS28-201ENST00000276585 PCDH11YQ9BZA8 1340 aa17.12■□□□□ 0.33
MRPS28-201ENST00000276585 ANKRD26Q9UPS8 1709 aa17.12■□□□□ 0.33
MRPS28-201ENST00000276585 LOC102724428A0A0B4J2F2 783 aa17.11■□□□□ 0.33
MRPS28-201ENST00000276585 TATP17735 454 aaPredicted RBP17.11■□□□□ 0.33
MRPS28-201ENST00000276585 HOXC9P31274 260 aa17.11■□□□□ 0.33
MRPS28-201ENST00000276585 SIK1P57059 783 aa17.11■□□□□ 0.33
MRPS28-201ENST00000276585 BRCA1P38398 1863 aaKnown RBP17.11■□□□□ 0.33
MRPS28-201ENST00000276585 GLTPD2A6NH11 291 aa17.1■□□□□ 0.33
MRPS28-201ENST00000276585 LBX1P52954 281 aa17.1■□□□□ 0.33
MRPS28-201ENST00000276585 ZC3H4Q9UPT8 1303 aaKnown RBP17.1■□□□□ 0.33
MRPS28-201ENST00000276585 HSPA5P11021 654 aaKnown RBP17.09■□□□□ 0.33
MRPS28-201ENST00000276585 CDCA8Q53HL2 280 aa17.09■□□□□ 0.33
MRPS28-201ENST00000276585 TRAPPC3LQ5T215 181 aa17.09■□□□□ 0.33
MRPS28-201ENST00000276585 CARD14Q9BXL6 1004 aa17.09■□□□□ 0.33
MRPS28-201ENST00000276585 MAP3K19Q56UN5 1328 aa17.08■□□□□ 0.32
MRPS28-201ENST00000276585 CCDC85CA6NKD9 419 aa17.08■□□□□ 0.32
MRPS28-201ENST00000276585 FYB1O15117 783 aa17.08■□□□□ 0.32
MRPS28-201ENST00000276585 FBLN1P23142 703 aa17.08■□□□□ 0.32
MRPS28-201ENST00000276585 ATP6V1AP38606 617 aa17.08■□□□□ 0.32
MRPS28-201ENST00000276585 RASSF7Q02833 373 aa17.08■□□□□ 0.32
MRPS28-201ENST00000276585 NBPF6Q5VWK0 638 aa17.08■□□□□ 0.32
MRPS28-201ENST00000276585 PIGBQ92521 554 aa17.08■□□□□ 0.32
MRPS28-201ENST00000276585 NBPF4Q96M43 638 aa17.08■□□□□ 0.32
MRPS28-201ENST00000276585 C4AP0C0L4 1744 aa17.07■□□□□ 0.32
MRPS28-201ENST00000276585 ITPK1Q13572 414 aa17.07■□□□□ 0.32
MRPS28-201ENST00000276585 COG3Q96JB2 828 aa17.07■□□□□ 0.32
MRPS28-201ENST00000276585 RTCBQ9Y3I0 505 aaKnown RBP17.07■□□□□ 0.32
MRPS28-201ENST00000276585 CNTNAP1P78357 1384 aa17.06■□□□□ 0.32
MRPS28-201ENST00000276585 GGNBP2Q9H3C7 697 aa17.06■□□□□ 0.32
MRPS28-201ENST00000276585 MAP2P11137 1827 aaKnown RBP17.05■□□□□ 0.32
MRPS28-201ENST00000276585 EIF4G2P78344 907 aaKnown RBP eCLIP17.05■□□□□ 0.32
MRPS28-201ENST00000276585 SBF1O95248 1867 aa17.05■□□□□ 0.32
MRPS28-201ENST00000276585 RTL1A6NKG5 1358 aa17.04■□□□□ 0.32
MRPS28-201ENST00000276585 CYP27B1O15528 508 aa17.04■□□□□ 0.32
MRPS28-201ENST00000276585 LMNB1P20700 586 aa17.04■□□□□ 0.32
MRPS28-201ENST00000276585 CHRNA5P30532 468 aa17.04■□□□□ 0.32
MRPS28-201ENST00000276585 ITGB4P16144 1822 aa17.04■□□□□ 0.32
MRPS28-201ENST00000276585 GYS1P13807 737 aa17.03■□□□□ 0.32
MRPS28-201ENST00000276585 RFC4P35249 363 aa17.03■□□□□ 0.32
MRPS28-201ENST00000276585 SMG6Q86US8 1419 aaKnown RBP17.03■□□□□ 0.32
MRPS28-201ENST00000276585 RGS19P49795 217 aa17.02■□□□□ 0.32
MRPS28-201ENST00000276585 CHADLQ6NUI6 762 aa17.02■□□□□ 0.32
MRPS28-201ENST00000276585 ARHGEF1Q92888 912 aaKnown RBP17.02■□□□□ 0.32
MRPS28-201ENST00000276585 TMOD3Q9NYL9 352 aa17.02■□□□□ 0.32
MRPS28-201ENST00000276585 VEGFBP49765 207 aa17.01■□□□□ 0.31
MRPS28-201ENST00000276585 RRS1Q15050 365 aaKnown RBP17.01■□□□□ 0.31
MRPS28-201ENST00000276585 WBP1LQ9NX94 342 aa17.01■□□□□ 0.31
MRPS28-201ENST00000276585 ASAP1Q9ULH1 1129 aa17.01■□□□□ 0.31
MRPS28-201ENST00000276585 KDM6AO15550 1401 aaPredicted RBP17■□□□□ 0.31
MRPS28-201ENST00000276585 HSPA8P11142 646 aaKnown RBP17■□□□□ 0.31
MRPS28-201ENST00000276585 DPY19L2Q6NUT2 758 aa17■□□□□ 0.31
MRPS28-201ENST00000276585 CFAP44Q96MT7 982 aa17■□□□□ 0.31
MRPS28-201ENST00000276585 POTECB2RU33 542 aa16.99■□□□□ 0.31
MRPS28-201ENST00000276585 TIAM2Q8IVF5 1701 aa16.96■□□□□ 0.31
MRPS28-201ENST00000276585 FLT4P35916 1363 aa16.96■□□□□ 0.31
MRPS28-201ENST00000276585 KIF24Q5T7B8 1368 aa16.96■□□□□ 0.31
MRPS28-201ENST00000276585 INSRP06213 1382 aa16.95■□□□□ 0.3
MRPS28-201ENST00000276585 POTEIP0CG38 1075 aa16.95■□□□□ 0.3
MRPS28-201ENST00000276585 POTEJP0CG39 1038 aa16.95■□□□□ 0.3
MRPS28-201ENST00000276585 POLR3GLQ9BT43 218 aa16.95■□□□□ 0.3
MRPS28-201ENST00000276585 NCAPD2Q15021 1401 aa16.95■□□□□ 0.3
MRPS28-201ENST00000276585 TMEM88BA6NKF7 163 aa16.94■□□□□ 0.3
MRPS28-201ENST00000276585 RPS6KA4O75676 772 aa16.94■□□□□ 0.3
MRPS28-201ENST00000276585 DDR1Q08345 913 aa16.94■□□□□ 0.3
MRPS28-201ENST00000276585 NKX1-1Q15270 411 aaPredicted RBP16.94■□□□□ 0.3
MRPS28-201ENST00000276585 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
MRPS28-201ENST00000276585 ATG3Q9NT62 314 aa16.94■□□□□ 0.3
MRPS28-201ENST00000276585 EMILIN1Q9Y6C2 1016 aa16.94■□□□□ 0.3
MRPS28-201ENST00000276585 MAP2K1Q02750 393 aaPredicted RBP16.93■□□□□ 0.3
MRPS28-201ENST00000276585 HSP90AB2PQ58FF8 381 aa16.93■□□□□ 0.3
MRPS28-201ENST00000276585 RC3H1Q5TC82 1133 aaKnown RBP16.93■□□□□ 0.3
MRPS28-201ENST00000276585 FKBP8Q14318 412 aa16.92■□□□□ 0.3
MRPS28-201ENST00000276585 PANK3Q9H999 370 aa16.92■□□□□ 0.3
MRPS28-201ENST00000276585 SRP68Q9UHB9 627 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms