RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 CCDC183Q5T5S1 534 aa15.41■□□□□ 0.06
HERC6-202ENST00000273960 LMOD2Q6P5Q4 547 aa15.41■□□□□ 0.06
HERC6-202ENST00000273960 LUZP1Q86V48 1076 aa15.41■□□□□ 0.06
HERC6-202ENST00000273960 PLEKHF1Q96S99 279 aa15.41■□□□□ 0.06
HERC6-202ENST00000273960 EMILIN1Q9Y6C2 1016 aa15.41■□□□□ 0.06
HERC6-202ENST00000273960 FERMT3Q86UX7 667 aa15.4■□□□□ 0.06
HERC6-202ENST00000273960 VPS37CA5D8V6 355 aaPredicted RBP15.4■□□□□ 0.06
HERC6-202ENST00000273960 HECW2Q9P2P5 1572 aa15.4■□□□□ 0.06
HERC6-202ENST00000273960 FAM173BQ6P4H8 233 aa15.4■□□□□ 0.06
HERC6-202ENST00000273960 TRMT1Q9NXH9 659 aaKnown RBP15.4■□□□□ 0.06
HERC6-202ENST00000273960 GTF2F1P35269 517 aaKnown RBP eCLIP15.39■□□□□ 0.05
HERC6-202ENST00000273960 OGFRQ9NZT2 677 aa15.39■□□□□ 0.05
HERC6-202ENST00000273960 A0A1W2PP64 1363 aa15.39■□□□□ 0.05
HERC6-202ENST00000273960 ABCC3O15438 1527 aa15.39■□□□□ 0.05
HERC6-202ENST00000273960 HDGFP51858 240 aaKnown RBP15.38■□□□□ 0.05
HERC6-202ENST00000273960 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.38■□□□□ 0.05
HERC6-202ENST00000273960 CCDC112Q8NEF3 446 aa15.38■□□□□ 0.05
HERC6-202ENST00000273960 MEIS3Q99687 375 aa15.38■□□□□ 0.05
HERC6-202ENST00000273960 TRIM5Q9C035 493 aa15.38■□□□□ 0.05
HERC6-202ENST00000273960 LTV1Q96GA3 475 aaPredicted RBP15.38■□□□□ 0.05
HERC6-202ENST00000273960 TRIM34Q9BYJ4 488 aa15.38■□□□□ 0.05
HERC6-202ENST00000273960 MBIPQ9NS73 344 aa15.38■□□□□ 0.05
HERC6-202ENST00000273960 KIF1BO60333 1816 aa15.38■□□□□ 0.05
HERC6-202ENST00000273960 NEO1Q92859 1461 aa15.38■□□□□ 0.05
HERC6-202ENST00000273960 DCTPP1Q9H773 170 aa15.37■□□□□ 0.05
HERC6-202ENST00000273960 ABCA6Q8N139 1617 aa15.37■□□□□ 0.05
HERC6-202ENST00000273960 MX1P20591 662 aa15.37■□□□□ 0.05
HERC6-202ENST00000273960 DNM1Q05193 864 aaKnown RBP15.37■□□□□ 0.05
HERC6-202ENST00000273960 NECTIN2Q92692 538 aa15.37■□□□□ 0.05
HERC6-202ENST00000273960 IQSEC2Q5JU85 1478 aa15.37■□□□□ 0.05
HERC6-202ENST00000273960 ALDH1L2Q3SY69 923 aa15.37■□□□□ 0.05
HERC6-202ENST00000273960 FAM184AQ8NB25 1140 aa15.37■□□□□ 0.05
HERC6-202ENST00000273960 COG3Q96JB2 828 aa15.37■□□□□ 0.05
HERC6-202ENST00000273960 TMX1Q9H3N1 280 aa15.37■□□□□ 0.05
HERC6-202ENST00000273960 ABCC11Q96J66 1382 aa15.36■□□□□ 0.05
HERC6-202ENST00000273960 F6X3S4 739 aa15.36■□□□□ 0.05
HERC6-202ENST00000273960 MCCP23508 829 aa15.36■□□□□ 0.05
HERC6-202ENST00000273960 NGDNQ8NEJ9 315 aaKnown RBP15.36■□□□□ 0.05
HERC6-202ENST00000273960 GTF3C6Q969F1 213 aa15.36■□□□□ 0.05
HERC6-202ENST00000273960 SPTLC3Q9NUV7 552 aa15.36■□□□□ 0.05
HERC6-202ENST00000273960 CTNNA3Q9UI47 895 aa15.36■□□□□ 0.05
HERC6-202ENST00000273960 MAP3K4Q9Y6R4 1608 aa15.36■□□□□ 0.05
HERC6-202ENST00000273960 ANKRD7Q92527 254 aa15.36■□□□□ 0.05
HERC6-202ENST00000273960 NUDT16Q96DE0 195 aaKnown RBP15.36■□□□□ 0.05
HERC6-202ENST00000273960 EID1Q9Y6B2 187 aa15.36■□□□□ 0.05
HERC6-202ENST00000273960 SLFN14P0C7P3 912 aa15.36■□□□□ 0.05
HERC6-202ENST00000273960 IPO4Q8TEX9 1081 aaKnown RBP15.36■□□□□ 0.05
HERC6-202ENST00000273960 GOLGA6L6A8MZA4 724 aa15.35■□□□□ 0.05
HERC6-202ENST00000273960 MIS18AQ9NYP9 233 aa15.35■□□□□ 0.05
HERC6-202ENST00000273960 ARID5BQ14865 1188 aa15.34■□□□□ 0.05
HERC6-202ENST00000273960 WDR33Q9C0J8 1336 aaKnown RBP15.34■□□□□ 0.05
HERC6-202ENST00000273960 MROH1Q8NDA8 1641 aa15.34■□□□□ 0.05
HERC6-202ENST00000273960 GORABQ5T7V8 394 aa15.34■□□□□ 0.05
HERC6-202ENST00000273960 IL1RAPL2Q9NP60 686 aa15.34■□□□□ 0.05
HERC6-202ENST00000273960 ANKRD36BQ8N2N9 1353 aa15.33■□□□□ 0.05
HERC6-202ENST00000273960 POLR3GO15318 223 aaPredicted RBP15.33■□□□□ 0.05
HERC6-202ENST00000273960 UVSSAQ2YD98 709 aa15.33■□□□□ 0.05
HERC6-202ENST00000273960 MYOM2P54296 1465 aa15.33■□□□□ 0.04
HERC6-202ENST00000273960 YTHDC2Q9H6S0 1430 aaKnown RBP15.33■□□□□ 0.04
HERC6-202ENST00000273960 A0A087WWV3 80 aa15.33■□□□□ 0.04
HERC6-202ENST00000273960 TIGD1Q96MW7 591 aa15.33■□□□□ 0.04
HERC6-202ENST00000273960 FRMPD1Q5SYB0 1578 aa15.33■□□□□ 0.04
HERC6-202ENST00000273960 ELF2Q15723 593 aa15.33■□□□□ 0.04
HERC6-202ENST00000273960 FEZ1Q99689 392 aa15.33■□□□□ 0.04
HERC6-202ENST00000273960 CCDC83Q8IWF9 413 aa15.32■□□□□ 0.04
HERC6-202ENST00000273960 API5Q9BZZ5 524 aaKnown RBP15.32■□□□□ 0.04
HERC6-202ENST00000273960 TFIP11Q9UBB9 837 aaKnown RBP15.32■□□□□ 0.04
HERC6-202ENST00000273960 ZNF215Q9UL58 517 aaPredicted RBP15.32■□□□□ 0.04
HERC6-202ENST00000273960 SMC3Q9UQE7 1217 aa15.32■□□□□ 0.04
HERC6-202ENST00000273960 TNNT3P45378 269 aaPredicted RBP15.32■□□□□ 0.04
HERC6-202ENST00000273960 PDE1AP54750 535 aa15.32■□□□□ 0.04
HERC6-202ENST00000273960 CEP85Q6P2H3 762 aa15.32■□□□□ 0.04
HERC6-202ENST00000273960 FILIP1Q7Z7B0 1213 aa15.32■□□□□ 0.04
HERC6-202ENST00000273960 CHMP4CQ96CF2 233 aa15.32■□□□□ 0.04
HERC6-202ENST00000273960 KDM5AP29375 1690 aaKnown RBP15.32■□□□□ 0.04
HERC6-202ENST00000273960 TERF2Q15554 542 aa15.31■□□□□ 0.04
HERC6-202ENST00000273960 UNC5CLQ8IV45 518 aa15.31■□□□□ 0.04
HERC6-202ENST00000273960 RIMS2Q9UQ26 1411 aa15.31■□□□□ 0.04
HERC6-202ENST00000273960 WASLO00401 505 aaPredicted RBP15.31■□□□□ 0.04
HERC6-202ENST00000273960 MROH2AA6NES4 1674 aa15.31■□□□□ 0.04
HERC6-202ENST00000273960 MYOM1P52179 1685 aa15.31■□□□□ 0.04
HERC6-202ENST00000273960 CFAP74Q9C0B2 1584 aa15.31■□□□□ 0.04
HERC6-202ENST00000273960 CCDC66A2RUB6 948 aa15.31■□□□□ 0.04
HERC6-202ENST00000273960 SYT1P21579 422 aa15.31■□□□□ 0.04
HERC6-202ENST00000273960 ESYT1Q9BSJ8 1104 aa15.31■□□□□ 0.04
HERC6-202ENST00000273960 IL25Q9H293 177 aa15.31■□□□□ 0.04
HERC6-202ENST00000273960 GOLGA6L4A6NEF3 574 aa15.3■□□□□ 0.04
HERC6-202ENST00000273960 USP27XA6NNY8 438 aa15.3■□□□□ 0.04
HERC6-202ENST00000273960 KRT222Q8N1A0 295 aa15.3■□□□□ 0.04
HERC6-202ENST00000273960 FOSBP53539 338 aa15.3■□□□□ 0.04
HERC6-202ENST00000273960 KMT5BQ4FZB7 885 aa15.3■□□□□ 0.04
HERC6-202ENST00000273960 KIF18AQ8NI77 898 aa15.3■□□□□ 0.04
HERC6-202ENST00000273960 DDX41Q9UJV9 622 aaKnown RBP15.3■□□□□ 0.04
HERC6-202ENST00000273960 STX6O43752 255 aa15.3■□□□□ 0.04
HERC6-202ENST00000273960 UBE2HP62256 183 aa15.3■□□□□ 0.04
HERC6-202ENST00000273960 TAF3Q5VWG9 929 aa15.3■□□□□ 0.04
HERC6-202ENST00000273960 NECAB1Q8N987 351 aa15.3■□□□□ 0.04
HERC6-202ENST00000273960 CCDC61Q9Y6R9 512 aa15.3■□□□□ 0.04
HERC6-202ENST00000273960 TCHHQ07283 1943 aa15.3■□□□□ 0.04
HERC6-202ENST00000273960 CCDC192P0DO97 292 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms