RNA–Protein interactions for RNA: ENST00000273398.7

ATP6V1A-201, Transcript of ATPase H+ transporting V1 subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATP6V1A, Length 4,591 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1A-201ENST00000273398 SBNO2Q9Y2G9 1366 aa8.5□□□□□ -1.05
ATP6V1A-201ENST00000273398 CLDN10P78369 228 aa8.5□□□□□ -1.05
ATP6V1A-201ENST00000273398 MAP3K11Q16584 847 aa8.5□□□□□ -1.05
ATP6V1A-201ENST00000273398 TSGA10IPQ3SY00 556 aa8.5□□□□□ -1.05
ATP6V1A-201ENST00000273398 MPHOSPH6Q99547 160 aaKnown RBP8.5□□□□□ -1.05
ATP6V1A-201ENST00000273398 CUX1P39880 1505 aa8.5□□□□□ -1.05
ATP6V1A-201ENST00000273398 BRD3Q15059 726 aa8.5□□□□□ -1.05
ATP6V1A-201ENST00000273398 SMAD5Q99717 465 aaKnown RBP8.5□□□□□ -1.05
ATP6V1A-201ENST00000273398 KIF3CO14782 793 aa8.5□□□□□ -1.05
ATP6V1A-201ENST00000273398 RETREG3Q86VR2 466 aa8.5□□□□□ -1.05
ATP6V1A-201ENST00000273398 MINDY4BA8MYZ0 360 aa8.49□□□□□ -1.05
ATP6V1A-201ENST00000273398 C21orf62-AS1Q17RA5 79 aa8.49□□□□□ -1.05
ATP6V1A-201ENST00000273398 TMC7Q7Z402 723 aa8.49□□□□□ -1.05
ATP6V1A-201ENST00000273398 CCDC87Q9NVE4 849 aa8.49□□□□□ -1.05
ATP6V1A-201ENST00000273398 CEP126Q9P2H0 1117 aa8.49□□□□□ -1.05
ATP6V1A-201ENST00000273398 ERCC6Q03468 1493 aa8.49□□□□□ -1.05
ATP6V1A-201ENST00000273398 NPHP1O15259 732 aa8.49□□□□□ -1.05
ATP6V1A-201ENST00000273398 PPP2R5EQ16537 467 aa8.49□□□□□ -1.05
ATP6V1A-201ENST00000273398 SWI5Q1ZZU3 235 aa8.49□□□□□ -1.05
ATP6V1A-201ENST00000273398 SAMD7Q7Z3H4 446 aa8.49□□□□□ -1.05
ATP6V1A-201ENST00000273398 ATCAYQ86WG3 371 aa8.49□□□□□ -1.05
ATP6V1A-201ENST00000273398 PEG3Q9GZU2 1588 aa8.49□□□□□ -1.05
ATP6V1A-201ENST00000273398 SLC10A3P09131 477 aa8.49□□□□□ -1.05
ATP6V1A-201ENST00000273398 JDP2Q8WYK2 163 aa8.49□□□□□ -1.05
ATP6V1A-201ENST00000273398 C8orf37Q96NL8 207 aa8.49□□□□□ -1.05
ATP6V1A-201ENST00000273398 PCSK2P16519 638 aa8.48□□□□□ -1.05
ATP6V1A-201ENST00000273398 ZCRB1Q8TBF4 217 aaKnown RBP8.48□□□□□ -1.05
ATP6V1A-201ENST00000273398 CXXC1Q9P0U4 656 aaPredicted RBP8.48□□□□□ -1.05
ATP6V1A-201ENST00000273398 SLC27A5Q9Y2P5 690 aa8.48□□□□□ -1.05
ATP6V1A-201ENST00000273398 IGF1RP08069 1367 aa8.48□□□□□ -1.05
ATP6V1A-201ENST00000273398 OS9Q13438 667 aaPredicted RBP8.48□□□□□ -1.05
ATP6V1A-201ENST00000273398 RNF19BQ6ZMZ0 732 aa8.48□□□□□ -1.05
ATP6V1A-201ENST00000273398 HMGXB3Q12766 1538 aa8.48□□□□□ -1.05
ATP6V1A-201ENST00000273398 NBPF14Q5TI25 921 aa8.47□□□□□ -1.05
ATP6V1A-201ENST00000273398 FAM13AO94988 1023 aa8.47□□□□□ -1.05
ATP6V1A-201ENST00000273398 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.47□□□□□ -1.05
ATP6V1A-201ENST00000273398 C3orf80F5H4A9 247 aa8.47□□□□□ -1.05
ATP6V1A-201ENST00000273398 FKBP5Q13451 457 aaPredicted RBP8.47□□□□□ -1.05
ATP6V1A-201ENST00000273398 TCEAL9Q9UHQ7 104 aa8.47□□□□□ -1.05
ATP6V1A-201ENST00000273398 SF3B2Q13435 895 aaKnown RBP8.47□□□□□ -1.05
ATP6V1A-201ENST00000273398 TAF7LQ5H9L4 462 aa8.47□□□□□ -1.05
ATP6V1A-201ENST00000273398 WDR78Q5VTH9 848 aa8.47□□□□□ -1.05
ATP6V1A-201ENST00000273398 POTEDQ86YR6 584 aa8.47□□□□□ -1.05
ATP6V1A-201ENST00000273398 MTUS2Q5JR59 1369 aa8.46□□□□□ -1.05
ATP6V1A-201ENST00000273398 PDS5BQ9NTI5 1447 aa8.46□□□□□ -1.05
ATP6V1A-201ENST00000273398 K7ELQ4 463 aaPredicted RBP8.46□□□□□ -1.05
ATP6V1A-201ENST00000273398 SH3BP5O60239 455 aa8.46□□□□□ -1.05
ATP6V1A-201ENST00000273398 ST7Q9NRC1 585 aa8.46□□□□□ -1.05
ATP6V1A-201ENST00000273398 PDE6BP35913 854 aa8.46□□□□□ -1.06
ATP6V1A-201ENST00000273398 Q3C1V9 767 aa8.46□□□□□ -1.06
ATP6V1A-201ENST00000273398 COLQQ9Y215 455 aaPredicted RBP8.46□□□□□ -1.06
ATP6V1A-201ENST00000273398 FHOD3Q2V2M9 1422 aa8.46□□□□□ -1.06
ATP6V1A-201ENST00000273398 CCDC146Q8IYE0 955 aa8.46□□□□□ -1.06
ATP6V1A-201ENST00000273398 SLAIN2Q9P270 581 aa8.46□□□□□ -1.06
ATP6V1A-201ENST00000273398 OSBPL2Q9H1P3 480 aa8.45□□□□□ -1.06
ATP6V1A-201ENST00000273398 PIF1Q9H611 641 aa8.45□□□□□ -1.06
ATP6V1A-201ENST00000273398 STAU1O95793 577 aaKnown RBP8.45□□□□□ -1.06
ATP6V1A-201ENST00000273398 COL4A3BPQ9Y5P4 624 aa8.45□□□□□ -1.06
ATP6V1A-201ENST00000273398 TRIM6-TRIM34B2RNG4 842 aa8.45□□□□□ -1.06
ATP6V1A-201ENST00000273398 HS2ST1Q7LGA3 356 aa8.45□□□□□ -1.06
ATP6V1A-201ENST00000273398 TTF2Q9UNY4 1162 aaKnown RBP8.45□□□□□ -1.06
ATP6V1A-201ENST00000273398 MAP4K4O95819 1239 aaPredicted RBP8.44□□□□□ -1.06
ATP6V1A-201ENST00000273398 EHHADHQ08426 723 aa8.44□□□□□ -1.06
ATP6V1A-201ENST00000273398 TNS4Q8IZW8 715 aa8.44□□□□□ -1.06
ATP6V1A-201ENST00000273398 AIDAQ96BJ3 306 aa8.44□□□□□ -1.06
ATP6V1A-201ENST00000273398 NUDT12Q9BQG2 462 aa8.44□□□□□ -1.06
ATP6V1A-201ENST00000273398 GADD45BO75293 160 aaPredicted RBP8.44□□□□□ -1.06
ATP6V1A-201ENST00000273398 COPS2P61201 443 aa8.44□□□□□ -1.06
ATP6V1A-201ENST00000273398 NOM1Q5C9Z4 860 aaKnown RBP8.44□□□□□ -1.06
ATP6V1A-201ENST00000273398 SLC4A10Q6U841 1118 aa8.44□□□□□ -1.06
ATP6V1A-201ENST00000273398 FERMT3Q86UX7 667 aa8.44□□□□□ -1.06
ATP6V1A-201ENST00000273398 PURBQ96QR8 312 aaKnown RBP8.44□□□□□ -1.06
ATP6V1A-201ENST00000273398 PRKD2Q9BZL6 878 aa8.44□□□□□ -1.06
ATP6V1A-201ENST00000273398 TOP2BQ02880 1626 aa8.44□□□□□ -1.06
ATP6V1A-201ENST00000273398 IRX5P78411 483 aaPredicted RBP8.44□□□□□ -1.06
ATP6V1A-201ENST00000273398 USP4Q13107 963 aa8.44□□□□□ -1.06
ATP6V1A-201ENST00000273398 LHX6Q9UPM6 363 aa8.44□□□□□ -1.06
ATP6V1A-201ENST00000273398 NOP9Q86U38 636 aaKnown RBP8.43□□□□□ -1.06
ATP6V1A-201ENST00000273398 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.43□□□□□ -1.06
ATP6V1A-201ENST00000273398 RRP7BPQ9NSQ0 103 aa8.43□□□□□ -1.06
ATP6V1A-201ENST00000273398 PTMSP20962 102 aa8.43□□□□□ -1.06
ATP6V1A-201ENST00000273398 SAFB2Q14151 953 aaKnown RBP eCLIP8.43□□□□□ -1.06
ATP6V1A-201ENST00000273398 NBPF20Q3BBV1 942 aa8.43□□□□□ -1.06
ATP6V1A-201ENST00000273398 CENPBP07199 599 aaPredicted RBP8.43□□□□□ -1.06
ATP6V1A-201ENST00000273398 EIF1AXP47813 144 aaKnown RBP8.43□□□□□ -1.06
ATP6V1A-201ENST00000273398 RGL4Q8IZJ4 473 aa8.43□□□□□ -1.06
ATP6V1A-201ENST00000273398 GPR152Q8TDT2 470 aa8.43□□□□□ -1.06
ATP6V1A-201ENST00000273398 A6NHS1 94 aa8.42□□□□□ -1.06
ATP6V1A-201ENST00000273398 LMOD3Q0VAK6 560 aa8.42□□□□□ -1.06
ATP6V1A-201ENST00000273398 MORC4Q8TE76 937 aa8.42□□□□□ -1.06
ATP6V1A-201ENST00000273398 RAB6BQ9NRW1 208 aa8.42□□□□□ -1.06
ATP6V1A-201ENST00000273398 AXIN2Q9Y2T1 843 aa8.42□□□□□ -1.06
ATP6V1A-201ENST00000273398 LZTS3O60299 673 aaPredicted RBP8.42□□□□□ -1.06
ATP6V1A-201ENST00000273398 FXR2P51116 673 aaKnown RBP eCLIP8.42□□□□□ -1.069e-7■■■□□ 15.8
ATP6V1A-201ENST00000273398 SPOCK3Q9BQ16 436 aa8.42□□□□□ -1.06
ATP6V1A-201ENST00000273398 PPP1R3GB7ZBB8 358 aa8.42□□□□□ -1.06
ATP6V1A-201ENST00000273398 GIGYF1O75420 1035 aaPredicted RBP8.42□□□□□ -1.06
ATP6V1A-201ENST00000273398 ANO8Q9HCE9 1232 aaPredicted RBP8.42□□□□□ -1.06
ATP6V1A-201ENST00000273398 MCM4P33991 863 aa8.42□□□□□ -1.06
ATP6V1A-201ENST00000273398 BLOC1S3Q6QNY0 202 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms