RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 SPDYE4A6NLX3 237 aa15.62■□□□□ 0.09
COL8A1-202ENST00000273342 IGSF3O75054 1194 aa15.62■□□□□ 0.09
COL8A1-202ENST00000273342 MX1P20591 662 aa15.62■□□□□ 0.09
COL8A1-202ENST00000273342 GIMAP6Q6P9H5 292 aa15.62■□□□□ 0.09
COL8A1-202ENST00000273342 ZFYVE9O95405 1425 aa15.62■□□□□ 0.09
COL8A1-202ENST00000273342 POGZQ7Z3K3 1410 aa15.62■□□□□ 0.09
COL8A1-202ENST00000273342 PTPRMP28827 1452 aa15.62■□□□□ 0.09
COL8A1-202ENST00000273342 SRCIN1Q9C0H9 1055 aa15.62■□□□□ 0.09
COL8A1-202ENST00000273342 ABCA9Q8IUA7 1624 aa15.62■□□□□ 0.09
COL8A1-202ENST00000273342 NEXMIFQ5QGS0 1516 aa15.62■□□□□ 0.09
COL8A1-202ENST00000273342 CHMLP26374 656 aa15.62■□□□□ 0.09
COL8A1-202ENST00000273342 LRRCC1Q9C099 1032 aa15.61■□□□□ 0.09
COL8A1-202ENST00000273342 HSP90AB2PQ58FF8 381 aa15.61■□□□□ 0.09
COL8A1-202ENST00000273342 LMTK2Q8IWU2 1503 aa15.6■□□□□ 0.09
COL8A1-202ENST00000273342 ARAP3Q8WWN8 1544 aa15.6■□□□□ 0.09
COL8A1-202ENST00000273342 FKBP5Q13451 457 aaPredicted RBP15.6■□□□□ 0.09
COL8A1-202ENST00000273342 EIF4A2Q14240 407 aaKnown RBP15.6■□□□□ 0.09
COL8A1-202ENST00000273342 ZNF710Q8N1W2 664 aa15.6■□□□□ 0.09
COL8A1-202ENST00000273342 TSPYL4Q9UJ04 414 aa15.6■□□□□ 0.09
COL8A1-202ENST00000273342 RGS12O14924 1447 aa15.6■□□□□ 0.09
COL8A1-202ENST00000273342 ARHGEF40Q8TER5 1519 aa15.6■□□□□ 0.09
COL8A1-202ENST00000273342 CHL1O00533 1208 aa15.6■□□□□ 0.09
COL8A1-202ENST00000273342 FAM69CQ0P6D2 419 aa15.6■□□□□ 0.09
COL8A1-202ENST00000273342 MYRIPQ8NFW9 859 aa15.6■□□□□ 0.09
COL8A1-202ENST00000273342 ARHGAP31Q2M1Z3 1444 aa15.59■□□□□ 0.09
COL8A1-202ENST00000273342 A0A0U1RQG5 324 aaPredicted RBP15.59■□□□□ 0.09
COL8A1-202ENST00000273342 GNAI2P04899 355 aa15.59■□□□□ 0.09
COL8A1-202ENST00000273342 CUL4AQ13619 759 aa15.59■□□□□ 0.09
COL8A1-202ENST00000273342 PPP4R3BQ5MIZ7 849 aa15.59■□□□□ 0.09
COL8A1-202ENST00000273342 SLC52A1Q9NWF4 448 aa15.59■□□□□ 0.09
COL8A1-202ENST00000273342 YEATS2Q9ULM3 1422 aa15.58■□□□□ 0.09
COL8A1-202ENST00000273342 CCDC94Q9BW85 323 aaPredicted RBP15.58■□□□□ 0.09
COL8A1-202ENST00000273342 PHF14O94880 888 aa15.58■□□□□ 0.08
COL8A1-202ENST00000273342 WDR33Q9C0J8 1336 aaKnown RBP15.57■□□□□ 0.08
COL8A1-202ENST00000273342 MAP2P11137 1827 aaKnown RBP15.57■□□□□ 0.08
COL8A1-202ENST00000273342 PIBF1Q8WXW3 757 aa15.57■□□□□ 0.08
COL8A1-202ENST00000273342 NUDT16Q96DE0 195 aaKnown RBP15.57■□□□□ 0.08
COL8A1-202ENST00000273342 LRRFIP2Q9Y608 721 aaKnown RBP15.57■□□□□ 0.08
COL8A1-202ENST00000273342 MCM2P49736 904 aa15.57■□□□□ 0.08
COL8A1-202ENST00000273342 ESF1Q9H501 851 aaKnown RBP15.57■□□□□ 0.08
COL8A1-202ENST00000273342 SPG7Q9UQ90 795 aa15.57■□□□□ 0.08
COL8A1-202ENST00000273342 SIGLEC1Q9BZZ2 1709 aa15.57■□□□□ 0.08
COL8A1-202ENST00000273342 FRMPD1Q5SYB0 1578 aa15.57■□□□□ 0.08
COL8A1-202ENST00000273342 ATP2B3Q16720 1220 aa15.57■□□□□ 0.08
COL8A1-202ENST00000273342 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.56■□□□□ 0.08
COL8A1-202ENST00000273342 AP5Z1O43299 807 aa15.56■□□□□ 0.08
COL8A1-202ENST00000273342 MTERF4Q7Z6M4 381 aaKnown RBP15.56■□□□□ 0.08
COL8A1-202ENST00000273342 PYCARDQ9ULZ3 195 aa15.56■□□□□ 0.08
COL8A1-202ENST00000273342 PTPRCP08575 1304 aa15.55■□□□□ 0.08
COL8A1-202ENST00000273342 CCDC183Q5T5S1 534 aa15.55■□□□□ 0.08
COL8A1-202ENST00000273342 SMAP1Q8IYB5 467 aaPredicted RBP15.55■□□□□ 0.08
COL8A1-202ENST00000273342 RTF1Q92541 710 aaKnown RBP15.55■□□□□ 0.08
COL8A1-202ENST00000273342 KIF3AQ9Y496 699 aa15.55■□□□□ 0.08
COL8A1-202ENST00000273342 WASLO00401 505 aaPredicted RBP15.55■□□□□ 0.08
COL8A1-202ENST00000273342 CAMK4Q16566 473 aa15.55■□□□□ 0.08
COL8A1-202ENST00000273342 CWC27Q6UX04 472 aaKnown RBP15.55■□□□□ 0.08
COL8A1-202ENST00000273342 RASEFQ8IZ41 740 aa15.55■□□□□ 0.08
COL8A1-202ENST00000273342 OSBPL3Q9H4L5 887 aa15.55■□□□□ 0.08
COL8A1-202ENST00000273342 VPS37CA5D8V6 355 aaPredicted RBP15.54■□□□□ 0.08
COL8A1-202ENST00000273342 SYT1P21579 422 aa15.54■□□□□ 0.08
COL8A1-202ENST00000273342 DNM1Q05193 864 aaKnown RBP15.54■□□□□ 0.08
COL8A1-202ENST00000273342 STK31Q9BXU1 1019 aa15.54■□□□□ 0.08
COL8A1-202ENST00000273342 AK2P54819 239 aa15.54■□□□□ 0.08
COL8A1-202ENST00000273342 FAM173BQ6P4H8 233 aa15.54■□□□□ 0.08
COL8A1-202ENST00000273342 FERMT3Q86UX7 667 aa15.54■□□□□ 0.08
COL8A1-202ENST00000273342 INTS4Q96HW7 963 aaKnown RBP15.54■□□□□ 0.08
COL8A1-202ENST00000273342 BCL2L12Q9HB09 334 aa15.54■□□□□ 0.08
COL8A1-202ENST00000273342 LARGE1O95461 756 aa15.54■□□□□ 0.08
COL8A1-202ENST00000273342 NUTM2GQ5VZR2 741 aa15.54■□□□□ 0.08
COL8A1-202ENST00000273342 CCDC83Q8IWF9 413 aa15.54■□□□□ 0.08
COL8A1-202ENST00000273342 SMC3Q9UQE7 1217 aa15.53■□□□□ 0.08
COL8A1-202ENST00000273342 KIF24Q5T7B8 1368 aa15.53■□□□□ 0.08
COL8A1-202ENST00000273342 STX6O43752 255 aa15.53■□□□□ 0.08
COL8A1-202ENST00000273342 SURF6O75683 361 aaKnown RBP15.53■□□□□ 0.08
COL8A1-202ENST00000273342 CCT4P50991 539 aaKnown RBP15.53■□□□□ 0.08
COL8A1-202ENST00000273342 HAP1P54257 671 aaPredicted RBP15.53■□□□□ 0.08
COL8A1-202ENST00000273342 TCHHQ07283 1943 aa15.52■□□□□ 0.08
COL8A1-202ENST00000273342 KDM4AO75164 1064 aa15.52■□□□□ 0.08
COL8A1-202ENST00000273342 ZSCAN22P10073 491 aaPredicted RBP15.52■□□□□ 0.08
COL8A1-202ENST00000273342 MTHFSDQ2M296 383 aaKnown RBP15.52■□□□□ 0.08
COL8A1-202ENST00000273342 ZSCAN20P17040 1043 aaPredicted RBP15.52■□□□□ 0.07
COL8A1-202ENST00000273342 U2AF2P26368 475 aaKnown RBP eCLIP15.52■□□□□ 0.07
COL8A1-202ENST00000273342 RIOK3O14730 519 aaKnown RBP15.52■□□□□ 0.07
COL8A1-202ENST00000273342 FLIIQ13045 1269 aa15.52■□□□□ 0.07
COL8A1-202ENST00000273342 PIK3C2BO00750 1634 aa15.51■□□□□ 0.07
COL8A1-202ENST00000273342 RPAP1Q9BWH6 1393 aaPredicted RBP15.51■□□□□ 0.07
COL8A1-202ENST00000273342 CASTP20810 708 aaKnown RBP15.51■□□□□ 0.07
COL8A1-202ENST00000273342 RUFY3Q7L099 469 aa15.51■□□□□ 0.07
COL8A1-202ENST00000273342 NECAB1Q8N987 351 aa15.51■□□□□ 0.07
COL8A1-202ENST00000273342 FAM184AQ8NB25 1140 aa15.51■□□□□ 0.07
COL8A1-202ENST00000273342 PRIMPOLQ96LW4 560 aa15.51■□□□□ 0.07
COL8A1-202ENST00000273342 KCNF1Q9H3M0 494 aa15.51■□□□□ 0.07
COL8A1-202ENST00000273342 SNX14Q9Y5W7 946 aa15.51■□□□□ 0.07
COL8A1-202ENST00000273342 CCDC61Q9Y6R9 512 aa15.51■□□□□ 0.07
COL8A1-202ENST00000273342 HMGN5P82970 282 aaKnown RBP15.5■□□□□ 0.07
COL8A1-202ENST00000273342 HECW2Q9P2P5 1572 aa15.5■□□□□ 0.07
COL8A1-202ENST00000273342 DLG5Q8TDM6 1919 aa15.5■□□□□ 0.07
COL8A1-202ENST00000273342 ANAPC15P60006 121 aa15.5■□□□□ 0.07
COL8A1-202ENST00000273342 CKAP2LQ8IYA6 745 aa15.5■□□□□ 0.07
COL8A1-202ENST00000273342 SALL3Q9BXA9 1300 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms