RNA–Protein interactions for RNA: ENST00000273156.11

SEC22C-202, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,608 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-202ENST00000273156 ZNF530Q6P9A1 599 aaPredicted RBP23.44■■□□□ 1.34
SEC22C-202ENST00000273156 SGIP1Q9BQI5 828 aa23.44■■□□□ 1.34
SEC22C-202ENST00000273156 AEBP1Q8IUX7 1158 aa23.42■■□□□ 1.34
SEC22C-202ENST00000273156 ARXQ96QS3 562 aa23.42■■□□□ 1.34
SEC22C-202ENST00000273156 LOC102724428A0A0B4J2F2 783 aa23.41■■□□□ 1.34
SEC22C-202ENST00000273156 U2AF1L5P0DN76 240 aaPredicted RBP23.41■■□□□ 1.34
SEC22C-202ENST00000273156 SIK1P57059 783 aa23.41■■□□□ 1.34
SEC22C-202ENST00000273156 U2AF1Q01081 240 aaKnown RBP eCLIP23.41■■□□□ 1.34
SEC22C-202ENST00000273156 SENP3-EIF4A1A0A087X0R7 540 aa23.4■■□□□ 1.34
SEC22C-202ENST00000273156 CCDC146Q8IYE0 955 aa23.4■■□□□ 1.34
SEC22C-202ENST00000273156 NGEFQ8N5V2 710 aa23.4■■□□□ 1.34
SEC22C-202ENST00000273156 SALL2Q9Y467 1007 aaPredicted RBP23.4■■□□□ 1.34
SEC22C-202ENST00000273156 MSH5O43196 834 aa23.39■■□□□ 1.33
SEC22C-202ENST00000273156 AK7Q96M32 723 aa23.39■■□□□ 1.33
SEC22C-202ENST00000273156 COL3A1P02461 1466 aaPredicted RBP23.39■■□□□ 1.33
SEC22C-202ENST00000273156 U2SURPO15042 1029 aaKnown RBP23.38■■□□□ 1.33
SEC22C-202ENST00000273156 FHDC1Q9C0D6 1143 aaPredicted RBP23.38■■□□□ 1.33
SEC22C-202ENST00000273156 ASAP1Q9ULH1 1129 aa23.38■■□□□ 1.33
SEC22C-202ENST00000273156 TOGARAM1Q9Y4F4 1720 aa23.38■■□□□ 1.33
SEC22C-202ENST00000273156 CABP4P57796 275 aa23.37■■□□□ 1.33
SEC22C-202ENST00000273156 RUNDC1Q96C34 613 aa23.37■■□□□ 1.33
SEC22C-202ENST00000273156 QSER1Q2KHR3 1735 aa23.37■■□□□ 1.33
SEC22C-202ENST00000273156 SYT17Q9BSW7 474 aa23.37■■□□□ 1.33
SEC22C-202ENST00000273156 PNNQ9H307 717 aaKnown RBP23.37■■□□□ 1.33
SEC22C-202ENST00000273156 ATG3Q9NT62 314 aa23.37■■□□□ 1.33
SEC22C-202ENST00000273156 MAP3K5Q99683 1374 aa23.36■■□□□ 1.33
SEC22C-202ENST00000273156 COL23A1Q86Y22 540 aaPredicted RBP23.36■■□□□ 1.33
SEC22C-202ENST00000273156 APAF1O14727 1248 aa23.35■■□□□ 1.33
SEC22C-202ENST00000273156 ATP6V1AP38606 617 aa23.35■■□□□ 1.33
SEC22C-202ENST00000273156 GTF3C3Q9Y5Q9 886 aa23.35■■□□□ 1.33
SEC22C-202ENST00000273156 AKAP4Q5JQC9 854 aa23.34■■□□□ 1.33
SEC22C-202ENST00000273156 ITGB4P16144 1822 aa23.34■■□□□ 1.33
SEC22C-202ENST00000273156 HMOX1P09601 288 aa23.32■■□□□ 1.32
SEC22C-202ENST00000273156 SSFA2P28290 1259 aa23.32■■□□□ 1.32
SEC22C-202ENST00000273156 KDM6AO15550 1401 aaPredicted RBP23.31■■□□□ 1.32
SEC22C-202ENST00000273156 C5P01031 1676 aa23.31■■□□□ 1.32
SEC22C-202ENST00000273156 LINC00116Q8NCU8 138 aa23.3■■□□□ 1.32
SEC22C-202ENST00000273156 FCHSD2O94868 740 aa23.3■■□□□ 1.32
SEC22C-202ENST00000273156 ITPK1Q13572 414 aa23.29■■□□□ 1.32
SEC22C-202ENST00000273156 NFATC2IPQ8NCF5 419 aa23.29■■□□□ 1.32
SEC22C-202ENST00000273156 RBM42Q9BTD8 480 aaKnown RBP23.29■■□□□ 1.32
SEC22C-202ENST00000273156 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.28■■□□□ 1.32
SEC22C-202ENST00000273156 NCBP3Q53F19 620 aaKnown RBP23.28■■□□□ 1.32
SEC22C-202ENST00000273156 C4BP0C0L5 1744 aa23.27■■□□□ 1.32
SEC22C-202ENST00000273156 GNPATO15228 680 aa23.26■■□□□ 1.31
SEC22C-202ENST00000273156 NEFMP07197 916 aa23.26■■□□□ 1.31
SEC22C-202ENST00000273156 MAPK8IP3Q9UPT6 1336 aa23.26■■□□□ 1.31
SEC22C-202ENST00000273156 PHF14O94880 888 aa23.26■■□□□ 1.31
SEC22C-202ENST00000273156 RC3H1Q5TC82 1133 aaKnown RBP23.26■■□□□ 1.31
SEC22C-202ENST00000273156 PLEKHF1Q96S99 279 aa23.26■■□□□ 1.31
SEC22C-202ENST00000273156 GOLGA2Q08379 1002 aa23.25■■□□□ 1.31
SEC22C-202ENST00000273156 KLHL34Q8N239 644 aa23.25■■□□□ 1.31
SEC22C-202ENST00000273156 SLC52A2Q9HAB3 445 aa23.25■■□□□ 1.31
SEC22C-202ENST00000273156 ZNF521Q96K83 1311 aa23.25■■□□□ 1.31
SEC22C-202ENST00000273156 MTHFSDQ2M296 383 aaKnown RBP23.24■■□□□ 1.31
SEC22C-202ENST00000273156 RTCBQ9Y3I0 505 aaKnown RBP23.24■■□□□ 1.31
SEC22C-202ENST00000273156 ADRA2BP18089 450 aa23.23■■□□□ 1.31
SEC22C-202ENST00000273156 MSL1Q68DK7 614 aa23.23■■□□□ 1.31
SEC22C-202ENST00000273156 GAS2L2Q8NHY3 880 aa23.23■■□□□ 1.31
SEC22C-202ENST00000273156 TAF1LQ8IZX4 1826 aa23.23■■□□□ 1.31
SEC22C-202ENST00000273156 TUBGCP6Q96RT7 1819 aa23.23■■□□□ 1.31
SEC22C-202ENST00000273156 RNMTO43148 476 aaKnown RBP23.22■■□□□ 1.31
SEC22C-202ENST00000273156 PTCD1O75127 700 aaKnown RBP23.22■■□□□ 1.31
SEC22C-202ENST00000273156 CNTNAP4Q9C0A0 1308 aa23.22■■□□□ 1.31
SEC22C-202ENST00000273156 COL24A1Q17RW2 1714 aa23.22■■□□□ 1.31
SEC22C-202ENST00000273156 YY1P25490 414 aa23.22■■□□□ 1.31
SEC22C-202ENST00000273156 CCDC27Q2M243 656 aa23.22■■□□□ 1.31
SEC22C-202ENST00000273156 TRAPPC3LQ5T215 181 aa23.22■■□□□ 1.31
SEC22C-202ENST00000273156 CDCA7LQ96GN5 454 aa23.22■■□□□ 1.31
SEC22C-202ENST00000273156 SLC4A9Q96Q91 983 aa23.22■■□□□ 1.31
SEC22C-202ENST00000273156 RSPH6AQ9H0K4 717 aa23.22■■□□□ 1.31
SEC22C-202ENST00000273156 NEUROD2Q15784 382 aa23.21■■□□□ 1.31
SEC22C-202ENST00000273156 PRKAR2BP31323 418 aa23.2■■□□□ 1.3
SEC22C-202ENST00000273156 AMIGO3Q86WK7 504 aa23.2■■□□□ 1.3
SEC22C-202ENST00000273156 WWC1Q8IX03 1113 aa23.2■■□□□ 1.3
SEC22C-202ENST00000273156 LGR6Q9HBX8 967 aa23.2■■□□□ 1.3
SEC22C-202ENST00000273156 SUPT16HQ9Y5B9 1047 aaKnown RBP23.2■■□□□ 1.3
SEC22C-202ENST00000273156 CD2APQ9Y5K6 639 aa23.2■■□□□ 1.3
SEC22C-202ENST00000273156 ZNF831Q5JPB2 1677 aa23.2■■□□□ 1.3
SEC22C-202ENST00000273156 NEFLP07196 543 aa23.19■■□□□ 1.3
SEC22C-202ENST00000273156 RRP7AQ9Y3A4 280 aaKnown RBP23.19■■□□□ 1.3
SEC22C-202ENST00000273156 RPS6KA4O75676 772 aa23.19■■□□□ 1.3
SEC22C-202ENST00000273156 GNAT3A8MTJ3 354 aa23.18■■□□□ 1.3
SEC22C-202ENST00000273156 TMPOP42166 694 aaKnown RBP23.18■■□□□ 1.3
SEC22C-202ENST00000273156 GPR162Q16538 588 aa23.18■■□□□ 1.3
SEC22C-202ENST00000273156 E9PSI1 815 aa23.16■■□□□ 1.3
SEC22C-202ENST00000273156 WDR63Q8IWG1 891 aa23.16■■□□□ 1.3
SEC22C-202ENST00000273156 NLGN1Q8N2Q7 840 aa23.16■■□□□ 1.3
SEC22C-202ENST00000273156 MRC1P22897 1456 aa23.15■■□□□ 1.3
SEC22C-202ENST00000273156 RFC4P35249 363 aa23.15■■□□□ 1.3
SEC22C-202ENST00000273156 SLFN5Q08AF3 891 aa23.15■■□□□ 1.3
SEC22C-202ENST00000273156 TEFQ10587 303 aa23.15■■□□□ 1.3
SEC22C-202ENST00000273156 UBR3Q6ZT12 1888 aa23.14■■□□□ 1.3
SEC22C-202ENST00000273156 CRKLP46109 303 aaKnown RBP23.14■■□□□ 1.29
SEC22C-202ENST00000273156 SMIM5Q71RC9 77 aa23.14■■□□□ 1.29
SEC22C-202ENST00000273156 RIPK4P57078 832 aa23.13■■□□□ 1.29
SEC22C-202ENST00000273156 VSIG10Q8N0Z9 540 aa23.13■■□□□ 1.29
SEC22C-202ENST00000273156 NLGN2Q8NFZ4 835 aa23.13■■□□□ 1.29
SEC22C-202ENST00000273156 ARHGEF1Q92888 912 aaKnown RBP23.13■■□□□ 1.29
SEC22C-202ENST00000273156 SCN11AQ9UI33 1791 aa23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms