RNA–Protein interactions for RNA: ENST00000273139.13

RBMS3-201, Transcript of RNA binding motif single stranded interacting protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RBMS3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBMS3-201ENST00000273139 KIF3CO14782 793 aa13.07□□□□□ -0.32
RBMS3-201ENST00000273139 MNX1P50219 401 aaPredicted RBP13.07□□□□□ -0.32
RBMS3-201ENST00000273139 TATP17735 454 aaPredicted RBP13.07□□□□□ -0.32
RBMS3-201ENST00000273139 SMG6Q86US8 1419 aaKnown RBP13.06□□□□□ -0.32
RBMS3-201ENST00000273139 NBPF6Q5VWK0 638 aa13.06□□□□□ -0.32
RBMS3-201ENST00000273139 SMIM5Q71RC9 77 aa13.06□□□□□ -0.32
RBMS3-201ENST00000273139 NBPF4Q96M43 638 aa13.06□□□□□ -0.32
RBMS3-201ENST00000273139 CGNL1Q0VF96 1302 aa13.06□□□□□ -0.32
RBMS3-201ENST00000273139 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.05□□□□□ -0.32
RBMS3-201ENST00000273139 PITPNM1O00562 1244 aa13.05□□□□□ -0.32
RBMS3-201ENST00000273139 RRS1Q15050 365 aaKnown RBP13.05□□□□□ -0.32
RBMS3-201ENST00000273139 BBXQ8WY36 941 aaPredicted RBP13.05□□□□□ -0.32
RBMS3-201ENST00000273139 PCDH11XQ9BZA7 1347 aa13.05□□□□□ -0.32
RBMS3-201ENST00000273139 PCDH11YQ9BZA8 1340 aa13.05□□□□□ -0.32
RBMS3-201ENST00000273139 SMARCC1Q92922 1105 aaPredicted RBP13.04□□□□□ -0.32
RBMS3-201ENST00000273139 TAF1LQ8IZX4 1826 aa13.04□□□□□ -0.32
RBMS3-201ENST00000273139 TOMM70O94826 608 aa13.03□□□□□ -0.32
RBMS3-201ENST00000273139 C4BP0C0L5 1744 aa13.03□□□□□ -0.32
RBMS3-201ENST00000273139 AMIGO3Q86WK7 504 aa13.03□□□□□ -0.32
RBMS3-201ENST00000273139 C16orf71Q8IYS4 520 aaPredicted RBP13.03□□□□□ -0.32
RBMS3-201ENST00000273139 BCS1LQ9Y276 419 aa13.03□□□□□ -0.32
RBMS3-201ENST00000273139 NSD3Q9BZ95 1437 aa13.02□□□□□ -0.32
RBMS3-201ENST00000273139 ARHGAP27Q6ZUM4 889 aa13.02□□□□□ -0.33
RBMS3-201ENST00000273139 SSFA2P28290 1259 aa13.01□□□□□ -0.33
RBMS3-201ENST00000273139 RTL1A6NKG5 1358 aa13□□□□□ -0.33
RBMS3-201ENST00000273139 GNPATO15228 680 aa13□□□□□ -0.33
RBMS3-201ENST00000273139 GSE1Q14687 1217 aa13□□□□□ -0.33
RBMS3-201ENST00000273139 DNAJC5GQ8N7S2 189 aa13□□□□□ -0.33
RBMS3-201ENST00000273139 NMRK2Q9NPI5 230 aa13□□□□□ -0.33
RBMS3-201ENST00000273139 MMP10P09238 476 aa12.99□□□□□ -0.33
RBMS3-201ENST00000273139 GGNBP2Q9H3C7 697 aa12.99□□□□□ -0.33
RBMS3-201ENST00000273139 UBR3Q6ZT12 1888 aa12.99□□□□□ -0.33
RBMS3-201ENST00000273139 A0A0G2JLW4 131 aa12.98□□□□□ -0.33
RBMS3-201ENST00000273139 CYP27B1O15528 508 aa12.98□□□□□ -0.33
RBMS3-201ENST00000273139 HTRA3P83110 453 aa12.98□□□□□ -0.33
RBMS3-201ENST00000273139 HSP90AB2PQ58FF8 381 aa12.98□□□□□ -0.33
RBMS3-201ENST00000273139 LINC00116Q8NCU8 138 aa12.98□□□□□ -0.33
RBMS3-201ENST00000273139 PIGBQ92521 554 aa12.98□□□□□ -0.33
RBMS3-201ENST00000273139 RNF25Q96BH1 459 aaPredicted RBP12.98□□□□□ -0.33
RBMS3-201ENST00000273139 ITGB4P16144 1822 aa12.98□□□□□ -0.33
RBMS3-201ENST00000273139 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
RBMS3-201ENST00000273139 ATP6V1AP38606 617 aa12.98□□□□□ -0.33
RBMS3-201ENST00000273139 SIK1P57059 783 aa12.98□□□□□ -0.33
RBMS3-201ENST00000273139 COL13A1Q5TAT6 717 aaPredicted RBP12.98□□□□□ -0.33
RBMS3-201ENST00000273139 TOGARAM1Q9Y4F4 1720 aa12.97□□□□□ -0.33
RBMS3-201ENST00000273139 FCHSD2O94868 740 aa12.97□□□□□ -0.33
RBMS3-201ENST00000273139 PUS7Q96PZ0 661 aaKnown RBP12.97□□□□□ -0.33
RBMS3-201ENST00000273139 TMOD3Q9NYL9 352 aa12.97□□□□□ -0.33
RBMS3-201ENST00000273139 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.97□□□□□ -0.33
RBMS3-201ENST00000273139 N4BP2Q86UW6 1770 aaPredicted RBP12.97□□□□□ -0.33
RBMS3-201ENST00000273139 TGFB2P61812 414 aa12.96□□□□□ -0.33
RBMS3-201ENST00000273139 TNS4Q8IZW8 715 aa12.96□□□□□ -0.33
RBMS3-201ENST00000273139 WDR90Q96KV7 1748 aa12.95□□□□□ -0.34
RBMS3-201ENST00000273139 PXDNLA1KZ92 1463 aa12.95□□□□□ -0.34
RBMS3-201ENST00000273139 PPM1GO15355 546 aaPredicted RBP12.95□□□□□ -0.34
RBMS3-201ENST00000273139 RBM46Q8TBY0 533 aaKnown RBP12.95□□□□□ -0.34
RBMS3-201ENST00000273139 KLRG1Q96E93 195 aa12.95□□□□□ -0.34
RBMS3-201ENST00000273139 SPG7Q9UQ90 795 aa12.95□□□□□ -0.34
RBMS3-201ENST00000273139 CICQ96RK0 1608 aaPredicted RBP12.94□□□□□ -0.34
RBMS3-201ENST00000273139 FYB1O15117 783 aa12.94□□□□□ -0.34
RBMS3-201ENST00000273139 TMF1P82094 1093 aa12.94□□□□□ -0.34
RBMS3-201ENST00000273139 TRAPPC3LQ5T215 181 aa12.94□□□□□ -0.34
RBMS3-201ENST00000273139 DCAF8Q5TAQ9 597 aa12.94□□□□□ -0.34
RBMS3-201ENST00000273139 C9orf131Q5VYM1 1079 aa12.94□□□□□ -0.34
RBMS3-201ENST00000273139 CCDC87Q9NVE4 849 aa12.94□□□□□ -0.34
RBMS3-201ENST00000273139 ASAP1Q9ULH1 1129 aa12.94□□□□□ -0.34
RBMS3-201ENST00000273139 INSRP06213 1382 aa12.94□□□□□ -0.34
RBMS3-201ENST00000273139 FLT4P35916 1363 aa12.94□□□□□ -0.34
RBMS3-201ENST00000273139 DPEP1P16444 411 aa12.94□□□□□ -0.34
RBMS3-201ENST00000273139 ITPK1Q13572 414 aa12.94□□□□□ -0.34
RBMS3-201ENST00000273139 RTCBQ9Y3I0 505 aaKnown RBP12.94□□□□□ -0.34
RBMS3-201ENST00000273139 ST20-MTHFSA0A0A6YYL1 179 aa12.93□□□□□ -0.34
RBMS3-201ENST00000273139 PAXIP1Q6ZW49 1069 aaPredicted RBP12.93□□□□□ -0.34
RBMS3-201ENST00000273139 RASEFQ8IZ41 740 aa12.93□□□□□ -0.34
RBMS3-201ENST00000273139 NLGN1Q8N2Q7 840 aa12.93□□□□□ -0.34
RBMS3-201ENST00000273139 PARP3Q9Y6F1 533 aa12.93□□□□□ -0.34
RBMS3-201ENST00000273139 KDM2BQ8NHM5 1336 aa12.92□□□□□ -0.34
RBMS3-201ENST00000273139 FSTL1Q12841 308 aa12.92□□□□□ -0.34
RBMS3-201ENST00000273139 RFC4P35249 363 aa12.91□□□□□ -0.34
RBMS3-201ENST00000273139 RRAGCQ9HB90 399 aa12.91□□□□□ -0.34
RBMS3-201ENST00000273139 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
RBMS3-201ENST00000273139 FAM212AQ96EL1 285 aa12.9□□□□□ -0.34
RBMS3-201ENST00000273139 RNF181Q9P0P0 153 aa12.9□□□□□ -0.34
RBMS3-201ENST00000273139 EMILIN1Q9Y6C2 1016 aa12.9□□□□□ -0.34
RBMS3-201ENST00000273139 TONSLQ96HA7 1378 aa12.9□□□□□ -0.34
RBMS3-201ENST00000273139 PLEKHG2Q9H7P9 1386 aa12.9□□□□□ -0.34
RBMS3-201ENST00000273139 PCNTO95613 3336 aa12.9□□□□□ -0.34
RBMS3-201ENST00000273139 JMYQ8N9B5 988 aa12.9□□□□□ -0.35
RBMS3-201ENST00000273139 TESK2Q96S53 571 aa12.9□□□□□ -0.35
RBMS3-201ENST00000273139 PIM2Q9P1W9 311 aa12.9□□□□□ -0.35
RBMS3-201ENST00000273139 MAP2P11137 1827 aaKnown RBP12.89□□□□□ -0.35
RBMS3-201ENST00000273139 KIF13BQ9NQT8 1826 aa12.89□□□□□ -0.35
RBMS3-201ENST00000273139 PKD1L3Q7Z443 1732 aa12.89□□□□□ -0.35
RBMS3-201ENST00000273139 KCPQ6ZWJ8 1503 aa12.89□□□□□ -0.35
RBMS3-201ENST00000273139 PRELPP51888 382 aa12.89□□□□□ -0.35
RBMS3-201ENST00000273139 DALRD3Q5D0E6 543 aaKnown RBP12.89□□□□□ -0.35
RBMS3-201ENST00000273139 IFNL2Q8IZJ0 200 aa12.89□□□□□ -0.35
RBMS3-201ENST00000273139 ARHGEF1Q92888 912 aaKnown RBP12.89□□□□□ -0.35
RBMS3-201ENST00000273139 CFAP44Q96MT7 982 aa12.89□□□□□ -0.35
RBMS3-201ENST00000273139 ATG3Q9NT62 314 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms