RNA–Protein interactions for RNA: ENST00000273048.2

RETREG2-201, Transcript of reticulophagy regulator family member 2, humanhuman

TSL 1 (best)

Gene RETREG2, Length 2,533 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2-201ENST00000273048 C3P01024 1663 aa28.97■■■□□ 2.23
RETREG2-201ENST00000273048 SOX12O15370 315 aa28.96■■■□□ 2.23
RETREG2-201ENST00000273048 CRB1P82279 1406 aa28.96■■■□□ 2.23
RETREG2-201ENST00000273048 NRKQ7Z2Y5 1582 aa28.95■■■□□ 2.23
RETREG2-201ENST00000273048 MBD3O95983 291 aa28.94■■■□□ 2.22
RETREG2-201ENST00000273048 RILPL2Q969X0 211 aa28.94■■■□□ 2.22
RETREG2-201ENST00000273048 ANO2Q9NQ90 1003 aa28.94■■■□□ 2.22
RETREG2-201ENST00000273048 TERF1P54274 439 aa28.93■■■□□ 2.22
RETREG2-201ENST00000273048 SALL3Q9BXA9 1300 aa28.93■■■□□ 2.22
RETREG2-201ENST00000273048 CUL4AQ13619 759 aa28.93■■■□□ 2.22
RETREG2-201ENST00000273048 TRIM6-TRIM34B2RNG4 842 aa28.92■■■□□ 2.22
RETREG2-201ENST00000273048 GNAI2P04899 355 aa28.92■■■□□ 2.22
RETREG2-201ENST00000273048 CCT4P50991 539 aaKnown RBP28.92■■■□□ 2.22
RETREG2-201ENST00000273048 ESF1Q9H501 851 aaKnown RBP28.92■■■□□ 2.22
RETREG2-201ENST00000273048 TSPYL4Q9UJ04 414 aa28.92■■■□□ 2.22
RETREG2-201ENST00000273048 GDPD2Q9HCC8 539 aa28.92■■■□□ 2.22
RETREG2-201ENST00000273048 FAM13BQ9NYF5 915 aa28.92■■■□□ 2.22
RETREG2-201ENST00000273048 MX1P20591 662 aa28.91■■■□□ 2.22
RETREG2-201ENST00000273048 UPF3BQ9BZI7 483 aaKnown RBP28.91■■■□□ 2.22
RETREG2-201ENST00000273048 PNMA6EA0A0J9YXQ4 647 aa28.91■■■□□ 2.22
RETREG2-201ENST00000273048 NUTM2FA1L443 756 aa28.91■■■□□ 2.22
RETREG2-201ENST00000273048 LRRCC1Q9C099 1032 aa28.91■■■□□ 2.22
RETREG2-201ENST00000273048 AKAP12Q02952 1782 aa28.9■■■□□ 2.22
RETREG2-201ENST00000273048 CHMLP26374 656 aa28.9■■■□□ 2.22
RETREG2-201ENST00000273048 MCM2P49736 904 aa28.9■■■□□ 2.22
RETREG2-201ENST00000273048 CCDC39Q9UFE4 941 aa28.9■■■□□ 2.22
RETREG2-201ENST00000273048 UQCRHLA0A096LP55 91 aa28.89■■■□□ 2.22
RETREG2-201ENST00000273048 UQCRHP07919 91 aa28.89■■■□□ 2.22
RETREG2-201ENST00000273048 MCCP23508 829 aa28.89■■■□□ 2.22
RETREG2-201ENST00000273048 TTC21BQ7Z4L5 1316 aa28.89■■■□□ 2.22
RETREG2-201ENST00000273048 ITSN1Q15811 1721 aa28.89■■■□□ 2.22
RETREG2-201ENST00000273048 UNC5CLQ8IV45 518 aa28.88■■■□□ 2.21
RETREG2-201ENST00000273048 GADD45BO75293 160 aaPredicted RBP28.88■■■□□ 2.21
RETREG2-201ENST00000273048 MTHFSDQ2M296 383 aaKnown RBP28.87■■■□□ 2.21
RETREG2-201ENST00000273048 TSPY26PQ9H489 355 aa28.87■■■□□ 2.21
RETREG2-201ENST00000273048 NECTIN2Q92692 538 aa28.86■■■□□ 2.21
RETREG2-201ENST00000273048 MAP3K19Q56UN5 1328 aa28.86■■■□□ 2.21
RETREG2-201ENST00000273048 PEAK1Q9H792 1746 aa28.85■■■□□ 2.21
RETREG2-201ENST00000273048 IL25Q9H293 177 aa28.85■■■□□ 2.21
RETREG2-201ENST00000273048 RTF1Q92541 710 aaKnown RBP28.85■■■□□ 2.21
RETREG2-201ENST00000273048 INTS4Q96HW7 963 aaKnown RBP28.85■■■□□ 2.21
RETREG2-201ENST00000273048 MCM5P33992 734 aa28.84■■■□□ 2.21
RETREG2-201ENST00000273048 TUBGCP6Q96RT7 1819 aa28.84■■■□□ 2.21
RETREG2-201ENST00000273048 ACEP12821 1306 aa28.84■■■□□ 2.21
RETREG2-201ENST00000273048 ANAPC15P60006 121 aa28.83■■■□□ 2.21
RETREG2-201ENST00000273048 PTMAP06454 111 aaKnown RBP28.83■■■□□ 2.21
RETREG2-201ENST00000273048 RIMS1Q86UR5 1692 aaKnown RBP28.83■■■□□ 2.21
RETREG2-201ENST00000273048 FKBP5Q13451 457 aaPredicted RBP28.82■■■□□ 2.2
RETREG2-201ENST00000273048 CSPP1Q1MSJ5 1256 aa28.82■■■□□ 2.2
RETREG2-201ENST00000273048 MPNDQ8N594 471 aa28.82■■■□□ 2.2
RETREG2-201ENST00000273048 KIF13AQ9H1H9 1805 aa28.82■■■□□ 2.2
RETREG2-201ENST00000273048 ZBTB7CA1YPR0 619 aa28.82■■■□□ 2.2
RETREG2-201ENST00000273048 STK31Q9BXU1 1019 aa28.82■■■□□ 2.2
RETREG2-201ENST00000273048 OVOS2A0A0J9YW53 1432 aa28.82■■■□□ 2.2
RETREG2-201ENST00000273048 OVOS2Q6IE36 1432 aa28.82■■■□□ 2.2
RETREG2-201ENST00000273048 ATP8B2P98198 1209 aa28.81■■■□□ 2.2
RETREG2-201ENST00000273048 TPRNQ4KMQ1 711 aa28.81■■■□□ 2.2
RETREG2-201ENST00000273048 USP48Q86UV5 1035 aa28.81■■■□□ 2.2
RETREG2-201ENST00000273048 FLIIQ13045 1269 aa28.81■■■□□ 2.2
RETREG2-201ENST00000273048 LRRFIP2Q9Y608 721 aaKnown RBP28.8■■■□□ 2.2
RETREG2-201ENST00000273048 RGPD1P0DJD0 1748 aa28.8■■■□□ 2.2
RETREG2-201ENST00000273048 SYAP1Q96A49 352 aaPredicted RBP28.8■■■□□ 2.2
RETREG2-201ENST00000273048 IL1RAPL2Q9NP60 686 aa28.79■■■□□ 2.2
RETREG2-201ENST00000273048 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP28.79■■■□□ 2.2
RETREG2-201ENST00000273048 TNRQ92752 1358 aa28.79■■■□□ 2.2
RETREG2-201ENST00000273048 GNAI3P08754 354 aa28.78■■■□□ 2.2
RETREG2-201ENST00000273048 MAP4K4O95819 1239 aaPredicted RBP28.78■■■□□ 2.2
RETREG2-201ENST00000273048 ROBO2Q9HCK4 1378 aa28.77■■■□□ 2.2
RETREG2-201ENST00000273048 STAP2Q9UGK3 403 aa28.77■■■□□ 2.2
RETREG2-201ENST00000273048 TCHHQ07283 1943 aa28.76■■■□□ 2.19
RETREG2-201ENST00000273048 SSH2Q76I76 1423 aa28.76■■■□□ 2.19
RETREG2-201ENST00000273048 NUTM1Q86Y26 1132 aa28.76■■■□□ 2.19
RETREG2-201ENST00000273048 ARID3AQ99856 593 aa28.76■■■□□ 2.19
RETREG2-201ENST00000273048 WDR33Q9C0J8 1336 aaKnown RBP28.75■■■□□ 2.19
RETREG2-201ENST00000273048 TECPR2O15040 1411 aa28.75■■■□□ 2.19
RETREG2-201ENST00000273048 SRCIN1Q9C0H9 1055 aa28.75■■■□□ 2.19
RETREG2-201ENST00000273048 SASS6Q6UVJ0 657 aa28.74■■■□□ 2.19
RETREG2-201ENST00000273048 SIRT1Q96EB6 747 aa28.74■■■□□ 2.19
RETREG2-201ENST00000273048 LARP6Q9BRS8 491 aaKnown RBP28.74■■■□□ 2.19
RETREG2-201ENST00000273048 TMEM2Q9UHN6 1383 aa28.74■■■□□ 2.19
RETREG2-201ENST00000273048 ZNF830Q96NB3 372 aaPredicted RBP28.74■■■□□ 2.19
RETREG2-201ENST00000273048 ARHGEF10O15013 1369 aa28.74■■■□□ 2.19
RETREG2-201ENST00000273048 RPAP1Q9BWH6 1393 aaPredicted RBP28.73■■■□□ 2.19
RETREG2-201ENST00000273048 HSPA4P34932 840 aa28.73■■■□□ 2.19
RETREG2-201ENST00000273048 KIAA2012Q0VF49 1180 aa28.73■■■□□ 2.19
RETREG2-201ENST00000273048 IL17RAQ96F46 866 aa28.72■■■□□ 2.19
RETREG2-201ENST00000273048 CNPY2Q9Y2B0 182 aa28.72■■■□□ 2.19
RETREG2-201ENST00000273048 UBR1Q8IWV7 1749 aa28.72■■■□□ 2.19
RETREG2-201ENST00000273048 PHF14O94880 888 aa28.72■■■□□ 2.19
RETREG2-201ENST00000273048 HDGFP51858 240 aaKnown RBP28.72■■■□□ 2.19
RETREG2-201ENST00000273048 USP25Q9UHP3 1055 aa28.72■■■□□ 2.19
RETREG2-201ENST00000273048 USP6P35125 1406 aa28.72■■■□□ 2.19
RETREG2-201ENST00000273048 DYNC1I1O14576 645 aa28.71■■■□□ 2.19
RETREG2-201ENST00000273048 CCDC30Q5VVM6 783 aa28.71■■■□□ 2.19
RETREG2-201ENST00000273048 USP44Q9H0E7 712 aa28.71■■■□□ 2.19
RETREG2-201ENST00000273048 EYA1Q99502 592 aa28.7■■■□□ 2.19
RETREG2-201ENST00000273048 USP31Q70CQ4 1352 aa28.7■■■□□ 2.18
RETREG2-201ENST00000273048 MAP7D2Q96T17 732 aa28.7■■■□□ 2.18
RETREG2-201ENST00000273048 LTKP29376 864 aa28.69■■■□□ 2.18
RETREG2-201ENST00000273048 XRN1Q8IZH2 1706 aaKnown RBP28.69■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms