RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 NUP188Q5SRE5 1749 aa12.62□□□□□ -0.39
CPNE9-201ENST00000273027 CAMTA1Q9Y6Y1 1673 aa12.62□□□□□ -0.39
CPNE9-201ENST00000273027 VAMP4O75379 141 aa12.62□□□□□ -0.39
CPNE9-201ENST00000273027 ZBTB7AO95365 584 aa12.62□□□□□ -0.39
CPNE9-201ENST00000273027 BMP2KLQ5H9B9 411 aa12.62□□□□□ -0.39
CPNE9-201ENST00000273027 L1TD1Q5T7N2 865 aaKnown RBP12.62□□□□□ -0.39
CPNE9-201ENST00000273027 IFFO2Q5TF58 517 aa12.62□□□□□ -0.39
CPNE9-201ENST00000273027 TMEM57Q8N5G2 664 aa12.62□□□□□ -0.39
CPNE9-201ENST00000273027 SNX21Q969T3 373 aa12.62□□□□□ -0.39
CPNE9-201ENST00000273027 C22orf23Q9BZE7 217 aa12.62□□□□□ -0.39
CPNE9-201ENST00000273027 PDGFDQ9GZP0 370 aaPredicted RBP12.62□□□□□ -0.39
CPNE9-201ENST00000273027 ATF5Q9Y2D1 282 aaPredicted RBP12.62□□□□□ -0.39
CPNE9-201ENST00000273027 RREB1Q92766 1687 aa12.61□□□□□ -0.39
CPNE9-201ENST00000273027 RBM25P49756 843 aaKnown RBP12.61□□□□□ -0.39
CPNE9-201ENST00000273027 C1QTNF8P60827 252 aa12.61□□□□□ -0.39
CPNE9-201ENST00000273027 MRPL50Q8N5N7 158 aaKnown RBP12.61□□□□□ -0.39
CPNE9-201ENST00000273027 NUDT16Q96DE0 195 aaKnown RBP12.61□□□□□ -0.39
CPNE9-201ENST00000273027 BCL11BQ9C0K0 894 aaPredicted RBP12.61□□□□□ -0.39
CPNE9-201ENST00000273027 CHMP5Q9NZZ3 219 aa12.61□□□□□ -0.39
CPNE9-201ENST00000273027 ISY1Q9ULR0 285 aaKnown RBP12.61□□□□□ -0.39
CPNE9-201ENST00000273027 CIZ1Q9ULV3 898 aaPredicted RBP12.61□□□□□ -0.39
CPNE9-201ENST00000273027 ABCC4O15439 1325 aa12.61□□□□□ -0.39
CPNE9-201ENST00000273027 ZBTB7BO15156 539 aaPredicted RBP12.6□□□□□ -0.39
CPNE9-201ENST00000273027 CHD1LQ86WJ1 897 aa12.6□□□□□ -0.39
CPNE9-201ENST00000273027 IL27Q8NEV9 243 aa12.6□□□□□ -0.39
CPNE9-201ENST00000273027 ANTXR1Q9H6X2 564 aa12.6□□□□□ -0.39
CPNE9-201ENST00000273027 SSH2Q76I76 1423 aa12.6□□□□□ -0.39
CPNE9-201ENST00000273027 TTC21BQ7Z4L5 1316 aa12.6□□□□□ -0.39
CPNE9-201ENST00000273027 PLEKHG3A1L390 1219 aa12.59□□□□□ -0.39
CPNE9-201ENST00000273027 PLSCR1O15162 318 aa12.59□□□□□ -0.39
CPNE9-201ENST00000273027 SEC24BO95487 1268 aa12.59□□□□□ -0.39
CPNE9-201ENST00000273027 SLC4A3P48751 1232 aa12.59□□□□□ -0.39
CPNE9-201ENST00000273027 ANO8Q9HCE9 1232 aaPredicted RBP12.59□□□□□ -0.39
CPNE9-201ENST00000273027 TNNQ9UQP3 1299 aa12.59□□□□□ -0.39
CPNE9-201ENST00000273027 SOS1Q07889 1333 aaPredicted RBP12.59□□□□□ -0.39
CPNE9-201ENST00000273027 TTC21AQ8NDW8 1320 aa12.59□□□□□ -0.39
CPNE9-201ENST00000273027 HSCBQ8IWL3 235 aa12.58□□□□□ -0.4
CPNE9-201ENST00000273027 SYT17Q9BSW7 474 aa12.58□□□□□ -0.4
CPNE9-201ENST00000273027 TBC1D2Q9BYX2 928 aa12.58□□□□□ -0.4
CPNE9-201ENST00000273027 THRAP3Q9Y2W1 955 aaKnown RBP12.58□□□□□ -0.4
CPNE9-201ENST00000273027 PTPRCP08575 1304 aa12.58□□□□□ -0.4
CPNE9-201ENST00000273027 ZBTB7CA1YPR0 619 aa12.57□□□□□ -0.4
CPNE9-201ENST00000273027 FRAT2O75474 233 aaPredicted RBP12.57□□□□□ -0.4
CPNE9-201ENST00000273027 PTGER2P43116 358 aa12.57□□□□□ -0.4
CPNE9-201ENST00000273027 TWISTNBQ3B726 338 aaPredicted RBP12.57□□□□□ -0.4
CPNE9-201ENST00000273027 PTF1AQ7RTS3 328 aa12.57□□□□□ -0.4
CPNE9-201ENST00000273027 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.57□□□□□ -0.4
CPNE9-201ENST00000273027 ABTB2Q8N961 1025 aa12.57□□□□□ -0.4
CPNE9-201ENST00000273027 FHDC1Q9C0D6 1143 aaPredicted RBP12.57□□□□□ -0.4
CPNE9-201ENST00000273027 USP31Q70CQ4 1352 aa12.56□□□□□ -0.4
CPNE9-201ENST00000273027 INTS3Q68E01 1043 aaKnown RBP12.56□□□□□ -0.4
CPNE9-201ENST00000273027 RPAP2Q8IXW5 612 aaPredicted RBP12.56□□□□□ -0.4
CPNE9-201ENST00000273027 PROM2Q8N271 834 aa12.56□□□□□ -0.4
CPNE9-201ENST00000273027 CACNA1FO60840 1977 aa12.56□□□□□ -0.4
CPNE9-201ENST00000273027 OVOS2A0A0J9YW53 1432 aa12.55□□□□□ -0.4
CPNE9-201ENST00000273027 OVOS2Q6IE36 1432 aa12.55□□□□□ -0.4
CPNE9-201ENST00000273027 USP54Q70EL1 1684 aa12.55□□□□□ -0.4
CPNE9-201ENST00000273027 DDX11L8A8MPP1 907 aa12.55□□□□□ -0.4
CPNE9-201ENST00000273027 MBIPQ9NS73 344 aa12.55□□□□□ -0.4
CPNE9-201ENST00000273027 HTATSF1O43719 755 aaKnown RBP12.54□□□□□ -0.4
CPNE9-201ENST00000273027 DDB1Q16531 1140 aa12.54□□□□□ -0.4
CPNE9-201ENST00000273027 CHMP4AQ9BY43 222 aa12.54□□□□□ -0.4
CPNE9-201ENST00000273027 STK32BQ9NY57 414 aa12.54□□□□□ -0.4
CPNE9-201ENST00000273027 ACEP12821 1306 aa12.54□□□□□ -0.4
CPNE9-201ENST00000273027 LMO7Q8WWI1 1683 aa12.54□□□□□ -0.4
CPNE9-201ENST00000273027 USP6P35125 1406 aa12.54□□□□□ -0.4
CPNE9-201ENST00000273027 GCP02774 474 aa12.53□□□□□ -0.4
CPNE9-201ENST00000273027 SKOR2Q2VWA4 1001 aaPredicted RBP12.53□□□□□ -0.4
CPNE9-201ENST00000273027 NME9Q86XW9 330 aa12.53□□□□□ -0.4
CPNE9-201ENST00000273027 PHACTR3Q96KR7 559 aa12.53□□□□□ -0.4
CPNE9-201ENST00000273027 BABAM1Q9NWV8 329 aa12.53□□□□□ -0.4
CPNE9-201ENST00000273027 EMILIN1Q9Y6C2 1016 aa12.53□□□□□ -0.4
CPNE9-201ENST00000273027 OVOS2A0A0G2JMS6 1433 aa12.53□□□□□ -0.4
CPNE9-201ENST00000273027 MFAP1P55081 439 aaKnown RBP12.52□□□□□ -0.41
CPNE9-201ENST00000273027 UTRNP46939 3433 aa12.51□□□□□ -0.41
CPNE9-201ENST00000273027 CHL1O00533 1208 aa12.51□□□□□ -0.41
CPNE9-201ENST00000273027 CDC45O75419 566 aa12.51□□□□□ -0.41
CPNE9-201ENST00000273027 HMOX1P09601 288 aa12.51□□□□□ -0.41
CPNE9-201ENST00000273027 SLC15A2Q16348 729 aa12.51□□□□□ -0.41
CPNE9-201ENST00000273027 GPR162Q16538 588 aa12.51□□□□□ -0.41
CPNE9-201ENST00000273027 TXNRD1Q16881 649 aa12.51□□□□□ -0.41
CPNE9-201ENST00000273027 ANKRD45Q5TZF3 282 aa12.51□□□□□ -0.41
CPNE9-201ENST00000273027 TOM1L2Q6ZVM7 507 aa12.51□□□□□ -0.41
CPNE9-201ENST00000273027 DCTPP1Q9H773 170 aa12.51□□□□□ -0.41
CPNE9-201ENST00000273027 CPDO75976 1380 aa12.51□□□□□ -0.41
CPNE9-201ENST00000273027 PARP4Q9UKK3 1724 aaKnown RBP12.51□□□□□ -0.41
CPNE9-201ENST00000273027 HMMRO75330 724 aa12.5□□□□□ -0.41
CPNE9-201ENST00000273027 MCM4P33991 863 aa12.5□□□□□ -0.41
CPNE9-201ENST00000273027 CASC1Q6TDU7 716 aa12.5□□□□□ -0.41
CPNE9-201ENST00000273027 MARCH10Q8NA82 808 aaPredicted RBP12.5□□□□□ -0.41
CPNE9-201ENST00000273027 ARXQ96QS3 562 aa12.5□□□□□ -0.41
CPNE9-201ENST00000273027 MTFR1LQ9H019 292 aa12.5□□□□□ -0.41
CPNE9-201ENST00000273027 RTL1A6NKG5 1358 aa12.5□□□□□ -0.41
CPNE9-201ENST00000273027 CASZ1Q86V15 1759 aa12.5□□□□□ -0.41
CPNE9-201ENST00000273027 CHD4Q14839 1912 aa12.49□□□□□ -0.41
CPNE9-201ENST00000273027 CRB1P82279 1406 aa12.49□□□□□ -0.41
CPNE9-201ENST00000273027 GIGYF1O75420 1035 aaPredicted RBP12.49□□□□□ -0.41
CPNE9-201ENST00000273027 ANKRD44Q8N8A2 993 aa12.49□□□□□ -0.41
CPNE9-201ENST00000273027 GBP4Q96PP9 640 aa12.49□□□□□ -0.41
CPNE9-201ENST00000273027 LNPKQ9C0E8 428 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms