RNA–Protein interactions for RNA: ENST00000272902.9

SUMF1-201, Transcript of sulfatase modifying factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMF1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1-201ENST00000272902 PTPRCP08575 1304 aa27.9■■■□□ 2.06
SUMF1-201ENST00000272902 TOM1L2Q6ZVM7 507 aa27.9■■■□□ 2.06
SUMF1-201ENST00000272902 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.9■■■□□ 2.062e-6■■□□□ 13.4
SUMF1-201ENST00000272902 PHKG2P15735 406 aa27.89■■■□□ 2.05
SUMF1-201ENST00000272902 CCDC30Q5VVM6 783 aa27.89■■■□□ 2.05
SUMF1-201ENST00000272902 STK31Q9BXU1 1019 aa27.89■■■□□ 2.05
SUMF1-201ENST00000272902 KDM6AO15550 1401 aaPredicted RBP27.88■■■□□ 2.05
SUMF1-201ENST00000272902 SOS1Q07889 1333 aaPredicted RBP27.88■■■□□ 2.05
SUMF1-201ENST00000272902 RGS3P49796 1198 aa27.87■■■□□ 2.05
SUMF1-201ENST00000272902 PARP4Q9UKK3 1724 aaKnown RBP27.87■■■□□ 2.05
SUMF1-201ENST00000272902 STRN4Q9NRL3 753 aa27.86■■■□□ 2.05
SUMF1-201ENST00000272902 PLEKHG2Q9H7P9 1386 aa27.85■■■□□ 2.05
SUMF1-201ENST00000272902 CYP27B1O15528 508 aa27.85■■■□□ 2.05
SUMF1-201ENST00000272902 INTS3Q68E01 1043 aaKnown RBP27.85■■■□□ 2.05
SUMF1-201ENST00000272902 IFNL2Q8IZJ0 200 aa27.85■■■□□ 2.05
SUMF1-201ENST00000272902 HDAC1Q13547 482 aaPredicted RBP27.84■■■□□ 2.05
SUMF1-201ENST00000272902 C1orf115Q9H7X2 142 aa27.84■■■□□ 2.05
SUMF1-201ENST00000272902 HDGFL1Q5TGJ6 251 aa27.84■■■□□ 2.05
SUMF1-201ENST00000272902 LARP1Q6PKG0 1096 aaKnown RBP27.83■■■□□ 2.05
SUMF1-201ENST00000272902 CHMP4BQ9H444 224 aaKnown RBP27.83■■■□□ 2.05
SUMF1-201ENST00000272902 COL22A1Q8NFW1 1626 aaPredicted RBP27.83■■■□□ 2.05
SUMF1-201ENST00000272902 F6X3S4 739 aa27.82■■■□□ 2.04
SUMF1-201ENST00000272902 EIF2S2P20042 333 aaKnown RBP27.81■■■□□ 2.04
SUMF1-201ENST00000272902 EVA1CP58658 441 aa27.81■■■□□ 2.04
SUMF1-201ENST00000272902 FLIIQ13045 1269 aa27.81■■■□□ 2.04
SUMF1-201ENST00000272902 PHLPP1O60346 1717 aa27.81■■■□□ 2.04
SUMF1-201ENST00000272902 PDE4AP27815 886 aa27.8■■■□□ 2.04
SUMF1-201ENST00000272902 CARD10Q9BWT7 1032 aa27.8■■■□□ 2.04
SUMF1-201ENST00000272902 SLC52A2Q9HAB3 445 aa27.8■■■□□ 2.04
SUMF1-201ENST00000272902 PDZRN3Q9UPQ7 1066 aa27.8■■■□□ 2.04
SUMF1-201ENST00000272902 HOXB7P09629 217 aa27.79■■■□□ 2.04
SUMF1-201ENST00000272902 NFATC2IPQ8NCF5 419 aa27.78■■■□□ 2.04
SUMF1-201ENST00000272902 COL16A1Q07092 1604 aaPredicted RBP27.78■■■□□ 2.04
SUMF1-201ENST00000272902 FKBP5Q13451 457 aaPredicted RBP27.77■■■□□ 2.04
SUMF1-201ENST00000272902 SLC4A10Q6U841 1118 aa27.77■■■□□ 2.04
SUMF1-201ENST00000272902 BTG4Q9NY30 223 aa27.77■■■□□ 2.04
SUMF1-201ENST00000272902 COL14A1Q05707 1796 aaKnown RBP27.77■■■□□ 2.04
SUMF1-201ENST00000272902 SHANK3Q9BYB0 1731 aa27.77■■■□□ 2.04
SUMF1-201ENST00000272902 DCAF5Q96JK2 942 aa27.77■■■□□ 2.04
SUMF1-201ENST00000272902 HEG1Q9ULI3 1381 aa27.77■■■□□ 2.04
SUMF1-201ENST00000272902 BACH2Q9BYV9 841 aa27.76■■■□□ 2.03
SUMF1-201ENST00000272902 SLC39A6Q13433 755 aa27.76■■■□□ 2.03
SUMF1-201ENST00000272902 PHAXQ9H814 394 aaKnown RBP27.76■■■□□ 2.03
SUMF1-201ENST00000272902 MRC1P22897 1456 aa27.75■■■□□ 2.03
SUMF1-201ENST00000272902 GIGYF1O75420 1035 aaPredicted RBP27.75■■■□□ 2.03
SUMF1-201ENST00000272902 IL2RBP14784 551 aa27.75■■■□□ 2.03
SUMF1-201ENST00000272902 ZCRB1Q8TBF4 217 aaKnown RBP27.75■■■□□ 2.03
SUMF1-201ENST00000272902 CHPF2Q9P2E5 772 aa27.75■■■□□ 2.03
SUMF1-201ENST00000272902 PRAMEF22A3QJZ6 481 aa27.75■■■□□ 2.03
SUMF1-201ENST00000272902 USP35Q9P2H5 1018 aa27.75■■■□□ 2.03
SUMF1-201ENST00000272902 SMC5Q8IY18 1101 aa27.74■■■□□ 2.03
SUMF1-201ENST00000272902 ZNF790Q6PG37 636 aa27.73■■■□□ 2.03
SUMF1-201ENST00000272902 SIRT2Q8IXJ6 389 aa27.73■■■□□ 2.03
SUMF1-201ENST00000272902 PIP4K2BP78356 416 aa27.73■■■□□ 2.03
SUMF1-201ENST00000272902 PCDH11XQ9BZA7 1347 aa27.72■■■□□ 2.03
SUMF1-201ENST00000272902 PCDH11YQ9BZA8 1340 aa27.72■■■□□ 2.03
SUMF1-201ENST00000272902 N4BP2Q86UW6 1770 aaPredicted RBP27.72■■■□□ 2.03
SUMF1-201ENST00000272902 HSP90AB1P08238 724 aaKnown RBP27.72■■■□□ 2.03
SUMF1-201ENST00000272902 MEIS3Q99687 375 aa27.72■■■□□ 2.03
SUMF1-201ENST00000272902 C5P01031 1676 aa27.72■■■□□ 2.03
SUMF1-201ENST00000272902 ANXA1P04083 346 aa27.7■■■□□ 2.03
SUMF1-201ENST00000272902 CCT4P50991 539 aaKnown RBP27.7■■■□□ 2.03
SUMF1-201ENST00000272902 TOM1O60784 492 aa27.68■■■□□ 2.02
SUMF1-201ENST00000272902 CHMP4AQ9BY43 222 aa27.68■■■□□ 2.02
SUMF1-201ENST00000272902 ATP10DQ9P241 1426 aa27.67■■■□□ 2.02
SUMF1-201ENST00000272902 CABP4P57796 275 aa27.67■■■□□ 2.02
SUMF1-201ENST00000272902 DDX54Q8TDD1 881 aaKnown RBP27.66■■■□□ 2.02
SUMF1-201ENST00000272902 C8orf34Q49A92 452 aa27.66■■■□□ 2.02
SUMF1-201ENST00000272902 DBF4Q9UBU7 674 aaPredicted RBP27.66■■■□□ 2.02
SUMF1-201ENST00000272902 PLCH1Q4KWH8 1693 aa27.66■■■□□ 2.02
SUMF1-201ENST00000272902 PXDNLA1KZ92 1463 aa27.65■■■□□ 2.02
SUMF1-201ENST00000272902 PROSER3Q2NL68 480 aa27.65■■■□□ 2.02
SUMF1-201ENST00000272902 FAM161AQ3B820 660 aa27.65■■■□□ 2.02
SUMF1-201ENST00000272902 ZNF496Q96IT1 587 aaPredicted RBP27.65■■■□□ 2.02
SUMF1-201ENST00000272902 ADAMTS2O95450 1211 aa27.63■■■□□ 2.01
SUMF1-201ENST00000272902 NUCB1Q02818 461 aa27.62■■■□□ 2.01
SUMF1-201ENST00000272902 NKX1-1Q15270 411 aaPredicted RBP27.62■■■□□ 2.01
SUMF1-201ENST00000272902 TTC5Q8N0Z6 440 aa27.62■■■□□ 2.01
SUMF1-201ENST00000272902 CEP85Q6P2H3 762 aa27.62■■■□□ 2.01
SUMF1-201ENST00000272902 ANKRD44Q8N8A2 993 aa27.62■■■□□ 2.01
SUMF1-201ENST00000272902 GCC1Q96CN9 775 aa27.62■■■□□ 2.01
SUMF1-201ENST00000272902 TOGARAM1Q9Y4F4 1720 aa27.61■■■□□ 2.01
SUMF1-201ENST00000272902 PI4KAP2A4QPH2 592 aa27.6■■■□□ 2.01
SUMF1-201ENST00000272902 PI4KAP1Q8N8J0 262 aa27.6■■■□□ 2.01
SUMF1-201ENST00000272902 RPAP2Q8IXW5 612 aaPredicted RBP27.59■■■□□ 2.01
SUMF1-201ENST00000272902 GLI3P10071 1580 aa27.59■■■□□ 2.01
SUMF1-201ENST00000272902 UBAP1LF5GYI3 381 aa27.59■■■□□ 2.01
SUMF1-201ENST00000272902 LNPKQ9C0E8 428 aa27.59■■■□□ 2.01
SUMF1-201ENST00000272902 ADCY9O60503 1353 aa27.59■■■□□ 2.01
SUMF1-201ENST00000272902 ERVV-2B6SEH9 535 aa27.58■■■□□ 2.01
SUMF1-201ENST00000272902 CHD1LQ86WJ1 897 aa27.58■■■□□ 2.01
SUMF1-201ENST00000272902 NUTM2BA6NNL0 878 aaPredicted RBP27.58■■■□□ 2
SUMF1-201ENST00000272902 NUTM2EB1AL46 878 aaPredicted RBP27.58■■■□□ 2
SUMF1-201ENST00000272902 PDIA6Q15084 440 aa27.58■■■□□ 2
SUMF1-201ENST00000272902 NUTM2AQ8IVF1 878 aaPredicted RBP27.58■■■□□ 2
SUMF1-201ENST00000272902 WNK3Q9BYP7 1800 aa27.57■■■□□ 2
SUMF1-201ENST00000272902 NRAPQ86VF7 1730 aa27.57■■■□□ 2
SUMF1-201ENST00000272902 DISP2A7MBM2 1401 aa27.57■■■□□ 2
SUMF1-201ENST00000272902 ANKRD45Q5TZF3 282 aa27.57■■■□□ 2
SUMF1-201ENST00000272902 DNAAF4Q8WXU2 420 aa27.57■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms