RNA–Protein interactions for RNA: ENST00000270115.7

LRRC56-201, Transcript of leucine rich repeat containing 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC56, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC56-201ENST00000270115 NEURL4Q96JN8 1562 aa20.73■□□□□ 0.91
LRRC56-201ENST00000270115 WDR33Q9C0J8 1336 aaKnown RBP20.73■□□□□ 0.91
LRRC56-201ENST00000270115 INTS4Q96HW7 963 aaKnown RBP20.73■□□□□ 0.91
LRRC56-201ENST00000270115 IFT57Q9NWB7 429 aa20.73■□□□□ 0.91
LRRC56-201ENST00000270115 TULP4Q9NRJ4 1543 aa20.72■□□□□ 0.91
LRRC56-201ENST00000270115 FAM83GA6ND36 823 aa20.72■□□□□ 0.91
LRRC56-201ENST00000270115 CTIFO43310 598 aaKnown RBP20.72■□□□□ 0.91
LRRC56-201ENST00000270115 DTNBO60941 627 aa20.72■□□□□ 0.91
LRRC56-201ENST00000270115 NCBP1Q09161 790 aaKnown RBP20.72■□□□□ 0.91
LRRC56-201ENST00000270115 OGFRQ9NZT2 677 aa20.72■□□□□ 0.91
LRRC56-201ENST00000270115 FIBPO43427 364 aa20.72■□□□□ 0.91
LRRC56-201ENST00000270115 DCTN1Q14203 1278 aa20.72■□□□□ 0.91
LRRC56-201ENST00000270115 MCCP23508 829 aa20.71■□□□□ 0.91
LRRC56-201ENST00000270115 RPAP2Q8IXW5 612 aaPredicted RBP20.71■□□□□ 0.91
LRRC56-201ENST00000270115 MEIS3Q99687 375 aa20.71■□□□□ 0.91
LRRC56-201ENST00000270115 LARP6Q9BRS8 491 aaKnown RBP20.71■□□□□ 0.91
LRRC56-201ENST00000270115 IFT172Q9UG01 1749 aa20.71■□□□□ 0.91
LRRC56-201ENST00000270115 SETBP1Q9Y6X0 1596 aa20.71■□□□□ 0.91
LRRC56-201ENST00000270115 LRRC7Q96NW7 1537 aa20.71■□□□□ 0.91
LRRC56-201ENST00000270115 VGFO15240 615 aaPredicted RBP20.71■□□□□ 0.91
LRRC56-201ENST00000270115 PDE1AP54750 535 aa20.71■□□□□ 0.91
LRRC56-201ENST00000270115 FEZ1Q99689 392 aa20.71■□□□□ 0.91
LRRC56-201ENST00000270115 ESYT1Q9BSJ8 1104 aa20.7■□□□□ 0.9
LRRC56-201ENST00000270115 ATP10DQ9P241 1426 aa20.7■□□□□ 0.9
LRRC56-201ENST00000270115 RPGRIP1LQ68CZ1 1315 aa20.7■□□□□ 0.9
LRRC56-201ENST00000270115 ADGRB1O14514 1584 aa20.7■□□□□ 0.9
LRRC56-201ENST00000270115 RILPL2Q969X0 211 aa20.7■□□□□ 0.9
LRRC56-201ENST00000270115 PTGS1P23219 599 aa20.69■□□□□ 0.9
LRRC56-201ENST00000270115 C16orf45Q96MC5 204 aaPredicted RBP20.69■□□□□ 0.9
LRRC56-201ENST00000270115 PDIA4P13667 645 aaKnown RBP20.69■□□□□ 0.9
LRRC56-201ENST00000270115 PLPPR3Q6T4P5 718 aa20.68■□□□□ 0.9
LRRC56-201ENST00000270115 KLHL34Q8N239 644 aa20.68■□□□□ 0.9
LRRC56-201ENST00000270115 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.68■□□□□ 0.9
LRRC56-201ENST00000270115 NAP1L2Q9ULW6 460 aaPredicted RBP20.68■□□□□ 0.9
LRRC56-201ENST00000270115 TRIM6-TRIM34B2RNG4 842 aa20.68■□□□□ 0.9
LRRC56-201ENST00000270115 ZNF853P0CG23 659 aa20.68■□□□□ 0.9
LRRC56-201ENST00000270115 CTNNA3Q9UI47 895 aa20.68■□□□□ 0.9
LRRC56-201ENST00000270115 TAF3Q5VWG9 929 aa20.67■□□□□ 0.9
LRRC56-201ENST00000270115 TERF2IPQ9NYB0 399 aa20.67■□□□□ 0.9
LRRC56-201ENST00000270115 FAM135BQ49AJ0 1406 aa20.67■□□□□ 0.9
LRRC56-201ENST00000270115 UBE2HP62256 183 aa20.67■□□□□ 0.9
LRRC56-201ENST00000270115 MINK1Q8N4C8 1332 aaPredicted RBP20.66■□□□□ 0.9
LRRC56-201ENST00000270115 MAPK8IP2Q13387 824 aaPredicted RBP20.66■□□□□ 0.9
LRRC56-201ENST00000270115 PUS7Q96PZ0 661 aaKnown RBP20.66■□□□□ 0.9
LRRC56-201ENST00000270115 MSH6P52701 1360 aa20.66■□□□□ 0.9
LRRC56-201ENST00000270115 EXOC6BQ9Y2D4 811 aa20.66■□□□□ 0.9
LRRC56-201ENST00000270115 RTL1A6NKG5 1358 aa20.65■□□□□ 0.9
LRRC56-201ENST00000270115 GOLGA6L6A8MZA4 724 aa20.65■□□□□ 0.9
LRRC56-201ENST00000270115 KIF13AQ9H1H9 1805 aa20.65■□□□□ 0.9
LRRC56-201ENST00000270115 LRMPQ12912 555 aa20.65■□□□□ 0.9
LRRC56-201ENST00000270115 FUCA2Q9BTY2 467 aa20.65■□□□□ 0.9
LRRC56-201ENST00000270115 SLC52A1Q9NWF4 448 aa20.65■□□□□ 0.9
LRRC56-201ENST00000270115 PPLO60437 1756 aa20.65■□□□□ 0.9
LRRC56-201ENST00000270115 PNPLA6Q8IY17 1366 aa20.65■□□□□ 0.9
LRRC56-201ENST00000270115 RPAP1Q9BWH6 1393 aaPredicted RBP20.65■□□□□ 0.9
LRRC56-201ENST00000270115 TMEM87AQ8NBN3 555 aa20.64■□□□□ 0.9
LRRC56-201ENST00000270115 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.64■□□□□ 0.9
LRRC56-201ENST00000270115 CHMP3Q9Y3E7 222 aa20.64■□□□□ 0.9
LRRC56-201ENST00000270115 SLFN14P0C7P3 912 aa20.64■□□□□ 0.89
LRRC56-201ENST00000270115 ZSCAN22P10073 491 aaPredicted RBP20.64■□□□□ 0.89
LRRC56-201ENST00000270115 KCNJ4P48050 445 aa20.64■□□□□ 0.89
LRRC56-201ENST00000270115 POLKQ9UBT6 870 aa20.64■□□□□ 0.89
LRRC56-201ENST00000270115 ARHGEF40Q8TER5 1519 aa20.64■□□□□ 0.89
LRRC56-201ENST00000270115 TRHP20396 242 aaPredicted RBP20.63■□□□□ 0.89
LRRC56-201ENST00000270115 PIK3C2BO00750 1634 aa20.63■□□□□ 0.89
LRRC56-201ENST00000270115 TPM3P06753 285 aa20.63■□□□□ 0.89
LRRC56-201ENST00000270115 DRC7Q8IY82 874 aa20.63■□□□□ 0.89
LRRC56-201ENST00000270115 CDK11BP21127 795 aaKnown RBP20.63■□□□□ 0.89
LRRC56-201ENST00000270115 RGS12O14924 1447 aa20.62■□□□□ 0.89
LRRC56-201ENST00000270115 CHMLP26374 656 aa20.62■□□□□ 0.89
LRRC56-201ENST00000270115 CCDC186Q7Z3E2 898 aa20.62■□□□□ 0.89
LRRC56-201ENST00000270115 KIF24Q5T7B8 1368 aa20.62■□□□□ 0.89
LRRC56-201ENST00000270115 GABPB1Q06547 395 aaPredicted RBP20.62■□□□□ 0.89
LRRC56-201ENST00000270115 NRBP1Q9UHY1 535 aa20.62■□□□□ 0.89
LRRC56-201ENST00000270115 STAG3Q9UJ98 1225 aa20.62■□□□□ 0.89
LRRC56-201ENST00000270115 DDX41Q9UJV9 622 aaKnown RBP20.62■□□□□ 0.89
LRRC56-201ENST00000270115 TNNT1P13805 278 aa20.61■□□□□ 0.89
LRRC56-201ENST00000270115 SYT1P21579 422 aa20.61■□□□□ 0.89
LRRC56-201ENST00000270115 SLC4A10Q6U841 1118 aa20.61■□□□□ 0.89
LRRC56-201ENST00000270115 ZNF592Q92610 1267 aa20.61■□□□□ 0.89
LRRC56-201ENST00000270115 STX6O43752 255 aa20.61■□□□□ 0.89
LRRC56-201ENST00000270115 ANAPC15P60006 121 aa20.61■□□□□ 0.89
LRRC56-201ENST00000270115 OSBPL3Q9H4L5 887 aa20.61■□□□□ 0.89
LRRC56-201ENST00000270115 NEXMIFQ5QGS0 1516 aa20.6■□□□□ 0.89
LRRC56-201ENST00000270115 DNM1Q05193 864 aaKnown RBP20.6■□□□□ 0.89
LRRC56-201ENST00000270115 IL25Q9H293 177 aa20.6■□□□□ 0.89
LRRC56-201ENST00000270115 EMILIN1Q9Y6C2 1016 aa20.6■□□□□ 0.89
LRRC56-201ENST00000270115 SMTNL1A8MU46 457 aa20.59■□□□□ 0.89
LRRC56-201ENST00000270115 HMMRO75330 724 aa20.59■□□□□ 0.89
LRRC56-201ENST00000270115 LUZP1Q86V48 1076 aa20.59■□□□□ 0.89
LRRC56-201ENST00000270115 UNC5CLQ8IV45 518 aa20.59■□□□□ 0.89
LRRC56-201ENST00000270115 ERICH4A6NGS2 130 aa20.59■□□□□ 0.89
LRRC56-201ENST00000270115 CAMK4Q16566 473 aa20.59■□□□□ 0.89
LRRC56-201ENST00000270115 HDGFL2Q7Z4V5 671 aaPredicted RBP20.59■□□□□ 0.89
LRRC56-201ENST00000270115 CABP1Q9NZU7 370 aa20.59■□□□□ 0.89
LRRC56-201ENST00000270115 PREX1Q8TCU6 1659 aa20.59■□□□□ 0.89
LRRC56-201ENST00000270115 F13A1P00488 732 aa20.58■□□□□ 0.89
LRRC56-201ENST00000270115 IRX5P78411 483 aaPredicted RBP20.58■□□□□ 0.89
LRRC56-201ENST00000270115 CCDC112Q8NEF3 446 aa20.58■□□□□ 0.89
LRRC56-201ENST00000270115 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms